Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:catenin complex
go back to main search page
Accession:GO:0016342 term browser browse the term
Definition:Complex of peripheral cytoplasmic proteins (alpha-, beta- and gamma-catenin) that interact with the cytoplasmic region of uvomorulin/E-cadherin to connect it to the actin cytoskeleton.


show annotations for term's descendants           Sort by:
catenin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APC APC regulator of WNT signaling pathway part_of IDA
IEA
IBA		 (PMID:7806582) CACAO
TreeGrafter
GO_Central		 PMID:7806582 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:112,707,498...112,846,239
Ensembl chr 5:112,707,518...112,846,239 		JBrowse link
G APC2 APC regulator of WNT signaling pathway 2 part_of IDA
IBA		 (PMID:9823329) MGI
GO_Central		 PMID:9823329 GO_REF:0000033 NCBI chr19:1,446,230...1,473,244
Ensembl chr19:1,446,302...1,473,244 		JBrowse link
G CDH1 cadherin 1 part_of IDA
IBA
IEA		 (PMID:18593713) BHF-UCL
GO_Central
TreeGrafter		 PMID:18593713 GO_REF:0000033 GO_REF:0000118 NCBI chr16:68,737,292...68,835,537
Ensembl chr16:68,737,292...68,835,537 		JBrowse link
G CDH10 cadherin 10 part_of IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:24,487,100...24,644,978
Ensembl chr 5:24,487,100...24,644,978 		JBrowse link
G CDH11 cadherin 11 part_of IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr16:64,943,753...65,123,744
Ensembl chr16:64,943,753...65,126,112 		JBrowse link
G CDH12 cadherin 12 part_of IBA GO_Central GO_REF:0000033 NCBI chr 5:21,750,673...22,853,344
Ensembl chr 5:21,750,673...22,853,344 		JBrowse link
G CDH13 cadherin 13 part_of IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr16:82,626,969...83,800,640
Ensembl chr16:82,626,965...83,800,640 		JBrowse link
G CDH15 cadherin 15 part_of IBA GO_Central GO_REF:0000033 NCBI chr16:89,171,748...89,195,492
Ensembl chr16:89,171,748...89,195,492 		JBrowse link
G CDH16 cadherin 16 part_of IEA TreeGrafter GO_REF:0000118 NCBI chr16:66,908,122...66,918,885
Ensembl chr16:66,908,122...66,918,917 		JBrowse link
G CDH17 cadherin 17 part_of IBA GO_Central GO_REF:0000033 NCBI chr 8:94,127,162...94,217,278
Ensembl chr 8:94,127,162...94,217,303 		JBrowse link
G CDH18 cadherin 18 part_of IBA GO_Central GO_REF:0000033 NCBI chr 5:19,471,296...20,575,713
Ensembl chr 5:19,471,296...20,575,873 		JBrowse link
G CDH19 cadherin 19 part_of IBA GO_Central GO_REF:0000033 NCBI chr18:66,501,083...66,604,090
Ensembl chr18:66,501,083...66,604,138 		JBrowse link
G CDH2 cadherin 2 part_of IDA
IBA		 (PMID:7650039) BHF-UCL
GO_Central		 PMID:7650039 GO_REF:0000033 NCBI chr18:27,932,879...28,177,130
Ensembl chr18:27,932,879...28,177,946 		JBrowse link
G CDH20 cadherin 20 part_of IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr18:61,333,430...61,555,779
Ensembl chr18:61,333,430...61,555,779 		JBrowse link
G CDH22 cadherin 22 part_of IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr20:46,173,739...46,308,498
Ensembl chr20:46,173,739...46,308,498 		JBrowse link
G CDH23 cadherin related 23 part_of IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr10:71,396,920...71,815,947
Ensembl chr10:71,396,920...71,815,947 		JBrowse link
G CDH24 cadherin 24 part_of IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr14:23,047,067...23,057,520
Ensembl chr14:23,047,062...23,057,538 		JBrowse link
G CDH26 cadherin 26 part_of IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr20:59,958,423...60,035,934
Ensembl chr20:59,958,423...60,034,011 		JBrowse link
G CDH3 cadherin 3 part_of IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr16:68,645,310...68,733,771
Ensembl chr16:68,636,189...68,727,468 		JBrowse link
G CDH4 cadherin 4 part_of IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr20:61,252,261...61,940,617
Ensembl chr20:61,252,261...61,940,617 		JBrowse link
G CDH5 cadherin 5 part_of IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr16:66,366,691...66,404,784
Ensembl chr16:66,366,690...66,404,784 		JBrowse link
G CDH6 cadherin 6 part_of IBA GO_Central GO_REF:0000033 NCBI chr 5:31,193,686...31,329,146
Ensembl chr 5:31,193,686...31,329,146 		JBrowse link
G CDH7 cadherin 7 part_of IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr18:65,750,252...65,890,337
Ensembl chr18:65,750,252...65,890,337 		JBrowse link
G CDH8 cadherin 8 part_of IBA GO_Central GO_REF:0000033 NCBI chr16:61,647,250...62,036,438
Ensembl chr16:61,647,242...62,037,035 		JBrowse link
G CDH9 cadherin 9 part_of IBA GO_Central GO_REF:0000033 NCBI chr 5:26,880,597...27,038,586
Ensembl chr 5:26,880,597...27,121,150 		JBrowse link
G CDHR1 cadherin related family member 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chr10:84,194,537...84,219,621
Ensembl chr10:84,194,537...84,219,621 		JBrowse link
G CDHR3 cadherin related family member 3 part_of IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:105,963,264...106,036,432
Ensembl chr 7:105,876,796...106,036,432 		JBrowse link
G CTNNA1 catenin alpha 1 part_of IDA
IEA
IBA		 (PMID:28051089), (PMID:7650039) BHF-UCL
TreeGrafter
GO_Central		 PMID:7650039 PMID:28051089 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:138,753,425...138,935,034
Ensembl chr 5:138,610,967...138,935,034 		JBrowse link
G CTNNA2 catenin alpha 2 part_of IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:79,185,377...80,648,780
Ensembl chr 2:79,185,231...80,648,861 		JBrowse link
G CTNNB1 catenin beta 1 part_of IEA
IBA
IDA		 (PMID:18593713), (PMID:20302655), (PMID:28051089), (PMID:7650039) Ensembl
TreeGrafter
GO_Central
BHF-UCL		 PMID:7650039 PMID:18593713 PMID:20302655 PMID:28051089 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096 		JBrowse link
G CTNND1 catenin delta 1 part_of IDA (PMID:28051089) UniProt PMID:28051089 NCBI chr11:57,761,802...57,819,540
Ensembl chr11:57,753,243...57,819,546 		JBrowse link
G DCHS1 dachsous cadherin-related 1 part_of IBA GO_Central GO_REF:0000033 NCBI chr11:6,621,330...6,655,809
Ensembl chr11:6,621,330...6,655,809 		JBrowse link
G DSC1 desmocollin 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chr18:31,129,236...31,162,856
Ensembl chr18:31,129,236...31,162,856 		JBrowse link
G FAT4 FAT atypical cadherin 4 part_of IEA TreeGrafter GO_REF:0000118 NCBI chr 4:125,314,955...125,492,932
Ensembl chr 4:125,314,918...125,492,932 		JBrowse link
G JUP junction plakoglobin part_of IEA
IBA
IDA		 (PMID:7650039) Ensembl
TreeGrafter
GO_Central
BHF-UCL		 PMID:7650039 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr17:41,754,609...41,786,711
Ensembl chr17:41,754,604...41,786,931 		JBrowse link
G PCDH1 protocadherin 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chr 5:141,853,090...141,878,410
Ensembl chr 5:141,853,090...141,879,246 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20717
    cellular anatomical entity 20331
      extrinsic component of membrane 248
        extrinsic component of plasma membrane 155
          catenin complex 36
Path 2
Term Annotations click to browse term
  cellular_component 20717
    cellular anatomical entity 20331
      membrane 10410
        membrane protein complex 1483
          plasma membrane protein complex 776
            catenin complex 36
paths to the root