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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of nucleotide-excision repair
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Accession:GO:2000819 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of nucleotide-excision repair.
Synonyms:exact_synonym: regulation of NER;   regulation of pyrimidine-dimer repair, DNA damage excision
 related_synonym: regulation of interstrand crosslink repair;   regulation of intrastrand cross-link repair


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regulation of nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cul4a cullin 4A acts_upstream_of_or_within ISO MGI:3851025 (PMID:19481525) RGD PMID:19481525 NCBI chr16:76,385,298...76,422,316
Ensembl chr16:76,384,546...76,422,330 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:18650382) RGD PMID:18650382 NCBI chr12:11,009,236...11,015,941
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Kat7 lysine acetyltransferase 7 involved_in ISO
ISS		 (PMID:28719581)
GO_REF:0000024		 RGD
UniProt		 PMID:28719581 GO_REF:0000024 NCBI chr10:80,718,335...80,752,387
Ensembl chr10:80,221,524...80,255,567 		JBrowse link
G Rad52 RAD52 homolog, DNA repair protein acts_upstream_of_or_within ISO (PMID:19506022) RGD PMID:19506022 NCBI chr 4:153,106,062...153,128,598
Ensembl chr 4:153,106,062...153,128,207 		JBrowse link
regulation of transcription-coupled nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in ISO (PMID:17297471) RGD PMID:17297471 NCBI chr 2:41,380,901...41,418,294
Ensembl chr 2:39,647,452...39,684,859 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20546
    regulation of biological process 13389
      regulation of cellular process 13025
        regulation of cellular response to stress 521
          regulation of DNA repair 183
            regulation of nucleotide-excision repair 5
              regulation of transcription-coupled nucleotide-excision repair 1
Path 2
Term Annotations click to browse term
  biological_process 20546
    cellular process 19536
      metabolic process 12171
        primary metabolic process 10746
          nucleobase-containing compound metabolic process 5951
            nucleic acid metabolic process 5334
              DNA metabolic process 972
                DNA repair 554
                  regulation of DNA repair 183
                    regulation of nucleotide-excision repair 5
                      regulation of transcription-coupled nucleotide-excision repair 1
paths to the root