Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:protein localization to early endosome
go back to main search page
Accession:GO:1902946 term browser browse the term
Definition:A process in which a protein is transported to, or maintained in, a location within an early endosome.
Synonyms:exact_synonym: protein localisation in early endosome;   protein localisation to early endosome;   protein localization in early endosome


show annotations for term's descendants           Sort by:
protein localization to early endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL8B ADP ribosylation factor like GTPase 8B involved_in ISO (PMID:36282215) UniProt PMID:36282215 NCBI chr13:61,640,619...61,696,819
Ensembl chr13:61,640,671...61,698,374 		JBrowse link
G MGAT3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase acts_upstream_of ISO (PMID:25592972) MGI PMID:25592972 NCBI chr 5:8,777,964...8,807,144
Ensembl chr 5:8,777,965...8,807,100 		JBrowse link
G NRP1 neuropilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:56,280,673...56,430,832
Ensembl chr10:56,280,665...56,430,777 		JBrowse link
neurotransmitter receptor transport postsynaptic membrane to endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERBIN erbb2 interacting protein involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:44,415,106...44,533,353
Ensembl chr16:44,415,189...44,533,349 		JBrowse link
G LRRC7 leucine rich repeat containing 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:142,735,676...143,273,992
Ensembl chr 6:142,735,890...143,274,231 		JBrowse link
G MKLN1 muskelin 1 involved_in ISO (PMID:21482357) SynGO PMID:21482357 NCBI chr18:17,493,806...17,832,519
Ensembl chr18:17,501,857...17,832,503 		JBrowse link
G RAB4A RAB4A, member RAS oncogene family involved_in ISO (PMID:24217640) SynGO PMID:24217640 NCBI chr14:60,481,484...60,528,549
Ensembl chr14:60,481,488...60,529,095 		JBrowse link
G SCRIB scribble planar cell polarity protein involved_in ISO PMID:25310985 SynGO PMID:25310985 RGD:12050130 NCBI chr 4:824,925...852,360
Ensembl chr 4:825,062...852,664 		JBrowse link
positive regulation of protein localization to early endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DTX3L deltex E3 ubiquitin ligase 3L involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:137,950,266...137,961,381
Ensembl chr13:137,950,272...137,961,343 		JBrowse link
G EGF epidermal growth factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:112,235,607...112,330,062
Ensembl chr 8:112,234,386...112,330,046 		JBrowse link
G EZR ezrin involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:8,403,362...8,452,750
Ensembl chr 1:8,403,453...8,452,742 		JBrowse link
G MGAT3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase acts_upstream_of_or_within ISO (PMID:25592972) MGI PMID:25592972 NCBI chr 5:8,777,964...8,807,144
Ensembl chr 5:8,777,965...8,807,100 		JBrowse link
G MSN moesin involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:51,844,197...51,967,674
Ensembl chr  X:51,844,156...51,970,107 		JBrowse link
G NF2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:46,653,869...46,726,421
Ensembl chr14:46,653,900...46,731,999 		JBrowse link
G RDX radixin involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:38,243,608...38,299,561
Ensembl chr 9:38,220,447...38,322,097 		JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:125,353,063...125,493,368
Ensembl chr 3:125,352,920...125,493,362 		JBrowse link
G SORL1 sortilin related receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:48,435,350...48,653,670
Ensembl chr 9:48,435,345...48,653,655 		JBrowse link
G VEGFA vascular endothelial growth factor A involved_in ISO (PMID:23639442) BHF-UCL PMID:23639442 NCBI chr 7:38,746,393...38,762,282
Ensembl chr 7:38,746,052...38,761,366 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17638
    localization 5329
      macromolecule localization 3009
        cellular macromolecule localization 2551
          protein localization 2538
            protein localization to organelle 1017
              protein localization to endosome 33
                protein localization to early endosome 17
                  neurotransmitter receptor transport postsynaptic membrane to endosome 5
                  positive regulation of protein localization to early endosome 10
                  regulation of protein localization to early endosome + 10
paths to the root