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ONTOLOGY REPORT - ANNOTATIONS

Term:ATP-dependent chromatin remodeler activity
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Accession:GO:0140658 term browser browse the term
Definition:An activity, driven by ATP hydrolysis, that modulates the contacts between histones and DNA, resulting in a change in chromosome architecture within the nucleosomal array, leading to chromatin remodeling.
Synonyms:exact_synonym: ATP hydrolysis-dependent chromatin remodeler activity;   ATP-dependent chromatin remodeller activity;   ATPase-dependent chromatin remodeler activity
 related_synonym: ATP-dependent chromatin remodelling;   nucleosome-activated ATPase activity;   nucleosome-dependent ATPase activity
 alt_id: GO:0070615


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ATP-dependent chromatin remodeler activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARID1A AT-rich interaction domain 1A enables ISO (PMID:23129809) MGI PMID:23129809 NCBI chr 1:25,960,868...26,047,057
Ensembl chr 1:27,018,616...27,103,239 		JBrowse link
G ATRX ATRX chromatin remodeler enables IEA InterPro GO_REF:0000002 NCBI chr  X:66,682,968...66,969,421
Ensembl chr  X:76,795,574...77,083,486 		JBrowse link
G BTAF1 B-TFIID TATA-box binding protein associated factor 1 enables IEA InterPro GO_REF:0000002 NCBI chr10:88,671,438...88,778,452
Ensembl chr10:92,193,094...92,298,865 		JBrowse link
G CHD1 chromodomain helicase DNA binding protein 1 enables IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 5:94,165,414...94,238,836
Ensembl chr 5:99,721,032...99,790,263 		JBrowse link
G CHD1L chromodomain helicase DNA binding protein 1 like enables IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 1:122,595,246...122,720,788
Ensembl chr 1:112,809,274...112,862,219 		JBrowse link
G CHD2 chromodomain helicase DNA binding protein 2 enables IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr15:71,568,560...71,713,330
Ensembl chr15:90,781,169...90,903,569 		JBrowse link
G CHD3 chromodomain helicase DNA binding protein 3 enables IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr17:7,919,803...7,947,787
Ensembl chr17:7,910,644...7,933,115 		JBrowse link
G CHD4 chromodomain helicase DNA binding protein 4 enables IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr12:6,701,004...6,738,621
Ensembl chr12:6,619,089...6,656,076 		JBrowse link
G CHD5 chromodomain helicase DNA binding protein 5 enables IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 1:4,867,636...4,947,401
Ensembl chr 1:6,125,525...6,191,991 		JBrowse link
G CHD6 chromodomain helicase DNA binding protein 6 enables IEA InterPro GO_REF:0000002 NCBI chr20:37,744,012...37,953,593
Ensembl chr20:38,839,685...38,999,501 		JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 enables IEA InterPro GO_REF:0000002 NCBI chr 8:57,091,002...57,282,471
Ensembl chr 8:58,816,840...58,945,186 		JBrowse link
G CHD8 chromodomain helicase DNA binding protein 8 enables IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr14:2,202,847...2,274,012
Ensembl chr14:20,281,422...20,326,361 		JBrowse link
G CHD9 chromodomain helicase DNA binding protein 9 enables IEA InterPro GO_REF:0000002 NCBI chr16:33,310,358...33,582,142
Ensembl chr16:52,550,321...52,665,290 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor enables IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr10:44,703,720...44,784,948 JBrowse link
G ERCC6L ERCC excision repair 6 like, spindle assembly checkpoint helicase enables IEA InterPro GO_REF:0000002 NCBI chr  X:61,441,350...61,476,267
Ensembl chr  X:71,526,160...71,560,091 		JBrowse link
G ERCC6L2 ERCC excision repair 6 like 2 enables IEA InterPro GO_REF:0000002 NCBI chr 9:66,967,399...67,153,934
Ensembl chr 9:95,092,512...95,183,122 		JBrowse link
G HELLS helicase, lymphoid specific enables IEA InterPro GO_REF:0000002 NCBI chr10:91,282,330...91,344,156
Ensembl chr10:94,790,292...94,847,209 		JBrowse link
G HLTF helicase like transcription factor enables IEA InterPro GO_REF:0000002 NCBI chr 3:146,054,371...146,111,150
Ensembl chr 3:153,632,319...153,688,951 		JBrowse link
G INO80 INO80 complex ATPase subunit enables IEA InterPro GO_REF:0000002 NCBI chr15:19,920,980...20,058,117
Ensembl chr15:38,170,982...38,307,311 		JBrowse link
G LOC100971447 E1A-binding protein p400 enables IEA InterPro GO_REF:0000002 NCBI chr12:129,606,823...129,737,179
Ensembl chr12:134,045,829...134,163,185 		JBrowse link
G LOC100991444 chromatin remodeling regulator CECR2 enables IEA Ensembl GO_REF:0000107 NCBI chr22:795,525...987,645
Ensembl chr22:16,335,754...16,412,640 		JBrowse link
G LOC100995302 RAD54 like 2 enables IEA InterPro GO_REF:0000002 NCBI chr 3:51,466,650...51,637,062
Ensembl chr 3:52,754,861...52,828,441
Ensembl chr 3:52,754,861...52,828,441 		JBrowse link
G RAD54B RAD54 homolog B enables IEA InterPro GO_REF:0000002 NCBI chr 8:90,995,229...91,098,149
Ensembl chr 8:92,939,535...93,034,060 		JBrowse link
G RAD54L RAD54 like enables IEA InterPro GO_REF:0000002 NCBI chr 1:45,549,586...45,581,711
Ensembl chr 1:46,905,598...46,936,259 		JBrowse link
G SHPRH SNF2 histone linker PHD RING helicase enables IEA InterPro GO_REF:0000002 NCBI chr 6:143,628,076...143,751,370
Ensembl chr 6:148,388,329...148,457,023 		JBrowse link
G SMARCA1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 contributes_to
enables		 ISO
IEA		 (PMID:15640247) MGI
TreeGrafter
InterPro		 PMID:15640247 GO_REF:0000002 GO_REF:0000118 NCBI chr  X:118,577,295...118,654,326
Ensembl chr  X:128,875,334...128,952,900 		JBrowse link
G SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 enables IEA InterPro GO_REF:0000002 NCBI chr 9:1,818,004...1,997,652
Ensembl chr 9:2,013,237...2,189,409 		JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 enables IEA InterPro GO_REF:0000002 NCBI chr19:10,515,216...10,616,155
Ensembl chr19:11,250,006...11,334,952 		JBrowse link
G SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 enables IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:135,874,888...135,917,096
Ensembl chr 4:147,174,060...147,214,809 		JBrowse link
G SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 enables IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr 4:86,567,722...86,651,527
Ensembl chr 4:97,240,614...97,324,366 		JBrowse link
G SMARCAL1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 enables IEA InterPro GO_REF:0000002 NCBI chr2B:103,672,934...103,743,802
Ensembl chr2B:222,276,353...222,347,258 		JBrowse link
G SRCAP Snf2 related CREBBP activator protein enables IEA InterPro GO_REF:0000002 NCBI chr16:24,229,869...24,271,427
Ensembl chr16:31,065,964...31,106,312 		JBrowse link
G TTF2 transcription termination factor 2 enables IEA InterPro GO_REF:0000002 NCBI chr 1:85,417,804...85,459,440
Ensembl chr 1:120,413,049...120,454,630 		JBrowse link
G ZRANB3 zinc finger RANBP2-type containing 3 enables IEA InterPro GO_REF:0000002 NCBI chr2B:24,331,731...24,665,652
Ensembl chr2B:139,234,909...139,577,193 		JBrowse link
ATP-dependent H2AZ histone chaperone activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VPS72 vacuolar protein sorting 72 homolog enables IEA InterPro GO_REF:0000002 NCBI chr 1:126,525,642...126,539,432
Ensembl chr 1:130,174,051...130,187,785 		JBrowse link
ATP-dependent histone chaperone activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MYD88 MYD88 innate immune signal transduction adaptor enables IEA Ensembl GO_REF:0000107 NCBI chr 3:38,036,565...38,041,014
Ensembl chr 3:38,319,024...38,323,572 		JBrowse link
histone octamer slider activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RSF1 remodeling and spacing factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr11:72,724,124...72,885,063
Ensembl chr11:76,364,842...76,525,034 		JBrowse link
G SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 enables IEA Ensembl GO_REF:0000107 NCBI chr 4:135,874,888...135,917,096
Ensembl chr 4:147,174,060...147,214,809 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 17494
    ATP-dependent activity 577
      ATP-dependent activity, acting on DNA 119
        ATP-dependent chromatin remodeler activity 37
          ATP-dependent histone chaperone activity + 2
          histone octamer slider activity + 2
Path 2
Term Annotations click to browse term
  molecular_function 17494
    catalytic activity 5388
      catalytic activity, acting on a nucleic acid 593
        catalytic activity, acting on DNA 244
          ATP-dependent activity, acting on DNA 119
            ATP-dependent chromatin remodeler activity 37
              ATP-dependent histone chaperone activity + 2
              histone octamer slider activity + 2
paths to the root