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ONTOLOGY REPORT - ANNOTATIONS

Term:presynaptic active zone cytoplasmic component
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Accession:GO:0098831 term browser browse the term
Definition:A specialized region below the presynaptic membrane, characterized by electron-dense material, a specialized cytoskeletal matrix and accumulated (associated) synaptic vesicles.
Synonyms:exact_synonym: cortex of presynaptic active zone;   presynaptic zone cortex

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presynaptic active zone cytoplasmic component term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsn bassoon presynaptic cytomatrix protein is_active_in
located_in		 ISO PMID:10340516
PMID:9679147
(MGI:5816444|PMID:21144999)		 SynGO PMID:9679147 PMID:10340516 PMID:21144999 MGI:5816444 RGD:13702152 RGD:69780 NCBI chrNW_004624730:3,498,118...3,600,488
Ensembl chrNW_004624730:3,498,257...3,593,450 		JBrowse link
G Ctbp1 C-terminal binding protein 1 is_active_in ISO (PMID:22745816) SynGO PMID:22745816 NCBI chrNW_004624755:25,998,524...26,021,223
Ensembl chrNW_004624755:25,999,713...26,021,331 		JBrowse link
G Ctbp2 C-terminal binding protein 2 is_active_in ISO (PMID:15728193), (PMID:22745816) SynGO PMID:15728193 PMID:22745816 NCBI chrNW_004624737:22,135,046...22,166,580
Ensembl chrNW_004624737:22,003,871...22,165,257 		JBrowse link
G Ctnna2 catenin alpha 2 is_active_in ISO (PMID:8909549) SynGO PMID:8909549 NCBI chrNW_004624749:22,332,750...23,546,165
Ensembl chrNW_004624749:22,333,710...23,412,593 		JBrowse link
G Ctnnb1 catenin beta 1 located_in
is_active_in		 IEA
ISO		 (PMID:8909549) Ensembl
SynGO		 PMID:8909549 GO_REF:0000107 NCBI chrNW_004624730:77,876,361...77,887,228
Ensembl chrNW_004624730:77,875,257...77,887,234 		JBrowse link
G Ctnnd1 catenin delta 1 is_active_in ISO PMID:12727444 SynGO PMID:12727444 RGD:2316208 NCBI chrNW_004624864:2,953,357...3,000,355
Ensembl chrNW_004624864:2,951,556...3,006,529 		JBrowse link
G Erc1 ELKS/RAB6-interacting/CAST family member 1 is_active_in ISO PMID:12391317 SynGO PMID:12391317 RGD:632516 NCBI chrNW_004624735:11,398,603...11,907,553
Ensembl chrNW_004624735:11,400,159...11,841,920 		JBrowse link
G Erc2 ELKS/RAB6-interacting/CAST family member 2 is_active_in ISO PMID:12391317
(PMID:29439199)		 SynGO PMID:12391317 PMID:29439199 RGD:632516 NCBI chrNW_004624822:756,532...1,806,129
Ensembl chrNW_004624822:756,550...1,807,175 		JBrowse link
G Gucy1b1 guanylate cyclase 1 soluble subunit beta 1 is_active_in ISO PMID:12388603 SynGO PMID:12388603 RGD:12050093 NCBI chrNW_004624848:2,462,240...2,508,197
Ensembl chrNW_004624848:2,462,104...2,508,983 		JBrowse link
G Iqsec2 IQ motif and Sec7 domain ArfGEF 2 is_active_in ISO (PMID:19811534) SynGO PMID:19811534 NCBI chrNW_004624909:462,724...564,989
Ensembl chrNW_004624909:460,626...565,133 		JBrowse link
G Osbpl2 oxysterol binding protein like 2 is_active_in
located_in		 ISO
IEA		 (PMID:36577376) SynGO
Ensembl		 PMID:36577376 GO_REF:0000107 NCBI chrNW_004624741:28,099,384...28,145,179
Ensembl chrNW_004624741:28,116,827...28,144,263 		JBrowse link
G Pclo piccolo presynaptic cytomatrix protein located_in
is_active_in		 ISO (MGI:5816444|PMID:21144999)
PMID:21712437
PMID:31959215		 SynGO PMID:21144999 PMID:21712437 PMID:31959215 MGI:5816444 RGD:155230771 RGD:9850098 NCBI chrNW_004624739:31,143,872...31,448,524 JBrowse link
G Ppfia3 PTPRF interacting protein alpha 3 is_active_in ISO (PMID:29439199) SynGO PMID:29439199 NCBI chrNW_004624832:4,941,760...4,964,615
Ensembl chrNW_004624832:4,941,766...4,964,602 		JBrowse link
G Rimbp2 RIMS binding protein 2 is_active_in ISO (PMID:27671655) SynGO PMID:27671655 NCBI chrNW_004624747:27,107,951...27,245,303
Ensembl chrNW_004624747:27,108,508...27,144,190 		JBrowse link
G Rims2 regulating synaptic membrane exocytosis 2 is_active_in ISO PMID:9252191 SynGO PMID:9252191 RGD:633897 NCBI chrNW_004624763:20,027,601...20,567,288
Ensembl chrNW_004624763:20,027,574...20,567,688 		JBrowse link
G Stxbp1 syntaxin binding protein 1 is_active_in ISO (PMID:32494600) SynGO PMID:32494600 NCBI chrNW_004624760:7,843,741...7,914,444
Ensembl chrNW_004624760:7,842,640...7,914,484 		JBrowse link
G Unc13a unc-13 homolog A located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624908:418,248...464,203 JBrowse link
G Unc13b unc-13 homolog B located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624915:327,633...530,522
Ensembl chrNW_004624915:327,401...531,886 		JBrowse link
cytoskeleton of presynaptic active zone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsn bassoon presynaptic cytomatrix protein located_in IEA
ISO		 TreeGrafter
RGD		 PMID:11596050 GO_REF:0000118 RGD:9850129 NCBI chrNW_004624730:3,498,118...3,600,488
Ensembl chrNW_004624730:3,498,257...3,593,450 		JBrowse link
G Erc1 ELKS/RAB6-interacting/CAST family member 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624735:11,398,603...11,907,553
Ensembl chrNW_004624735:11,400,159...11,841,920 		JBrowse link
G Pclo piccolo presynaptic cytomatrix protein ISO RGD PMID:11596050 RGD:9850129 NCBI chrNW_004624739:31,143,872...31,448,524 JBrowse link
G Rims2 regulating synaptic membrane exocytosis 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624763:20,027,601...20,567,288
Ensembl chrNW_004624763:20,027,574...20,567,688 		JBrowse link
G Rims3 regulating synaptic membrane exocytosis 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624892:83,904...122,978
Ensembl chrNW_004624892:89,691...123,037 		JBrowse link
G Rims4 regulating synaptic membrane exocytosis 4 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624790:9,654,266...9,720,522
Ensembl chrNW_004624790:9,658,850...9,721,084 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 15763
    cellular anatomical entity 15663
      presynaptic active zone 134
        presynaptic active zone cytoplasmic component 20
          cytoskeleton of presynaptic active zone + 6
Path 2
Term Annotations click to browse term
  cellular_component 15763
    cellular anatomical entity 15663
      cell junction 2368
        synapse 1840
          presynapse 815
            presynaptic active zone 134
              presynaptic active zone cytoplasmic component 20
                cytoskeleton of presynaptic active zone + 6
paths to the root