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ONTOLOGY REPORT - ANNOTATIONS

Term:D-amino acid metabolic process
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Accession:GO:0046416 term browser browse the term
Definition:The chemical reactions and pathways involving D-amino acids, the D-enantiomers of amino acids.
Synonyms:exact_synonym: D-amino acid metabolism


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D-amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:42,592,342...42,613,046
Ensembl chr12:42,592,343...42,612,741 		JBrowse link
D-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase involved_in ISO
IBA		 (PMID:16616139), (PMID:20603179)
GO_REF:0000033
(MGI:5442503|PMID:20603179)		 RGD
GO_Central		 PMID:16616139 PMID:20603179 GO_REF:0000033 MGI:5442503 NCBI chr12:42,592,342...42,613,046
Ensembl chr12:42,592,343...42,612,741 		JBrowse link
D-amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase involved_in ISO (PMID:29274788)
(PMID:16751595), (PMID:2572224)		 RGD PMID:2572224 PMID:16751595 PMID:29274788 NCBI chr12:42,592,342...42,613,046
Ensembl chr12:42,592,343...42,612,741 		JBrowse link
G Ddo D-aspartate oxidase involved_in IDA
IBA
IEA
ISO		 PMID:25747990
GO_REF:0000033
GO_REF:0000117
(MGI:5442503|PMID:20603179), (MGI:7482880|PMID:37189369), (MGI:7565899|PMID:25747990), (MGI:7565904|PMID:32553892), (MGI:7565916|PMID:26058797)
(PMID:16751595), (PMID:17234685)
(PMID:20603179), (PMID:25747990), (PMID:28629864)
(PMID:33650155)
PMID:29292239		 GO_Central
UniProt
RGD		 PMID:16751595 PMID:17234685 PMID:20603179 PMID:25747990 PMID:26058797 More... GO_REF:0000033 GO_REF:0000117 MGI:5442503 MGI:7482880 MGI:7565899 MGI:7565904 MGI:7565916, RGD:401901226, RGD:401901239 NCBI chr20:44,090,823...44,109,962
Ensembl chr20:44,090,914...44,133,095 		JBrowse link
D-serine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srr serine racemase involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:11054547), (PMID:15193426)
GO_REF:0000033
(PMID:10557334), (PMID:11054547), (PMID:12021263), (PMID:15710237)		 RGD
GO_Central		 PMID:10557334 PMID:11054547 PMID:12021263 PMID:15193426 PMID:15710237 GO_REF:0000033 NCBI chr10:59,769,563...59,786,688
Ensembl chr10:59,769,571...59,787,011 		JBrowse link
D-serine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase involved_in ISO
IBA		 (PMID:18544534)
GO_REF:0000033		 RGD
GO_Central		 PMID:18544534 GO_REF:0000033 NCBI chr12:42,592,342...42,613,046
Ensembl chr12:42,592,343...42,612,741 		JBrowse link
D-serine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase involved_in ISO (PMID:21679769) RGD PMID:21679769 NCBI chr12:42,592,342...42,613,046
Ensembl chr12:42,592,343...42,612,741 		JBrowse link
G Srr serine racemase involved_in ISO
IDA		 (PMID:20106978) RGD PMID:20106978 PMID:20106978 RGD:8554326 NCBI chr10:59,769,563...59,786,688
Ensembl chr10:59,769,571...59,787,011 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19692
    metabolic process 11456
      primary metabolic process 10015
        amino acid metabolic process 292
          non-proteinogenic amino acid metabolic process 72
            D-amino acid metabolic process 3
              D-alanine metabolic process + 1
              D-amino acid biosynthetic process + 1
              D-amino acid catabolic process + 2
              D-arginine metabolic process 0
              D-cysteine metabolic process + 0
              D-glutamate metabolic process 0
              D-glutamine metabolic process 0
              D-leucine metabolic process + 0
              D-lysine metabolic process + 0
              D-ornithine metabolic process 0
              D-serine metabolic process + 2
              D-tyrosine metabolic process + 0
              D-valine metabolic process + 0
              octopine metabolic process + 0
Path 2
Term Annotations click to browse term
  biological_process 19692
    metabolic process 11456
      organic substance metabolic process 10970
        organic acid metabolic process 1021
          oxoacid metabolic process 1010
            carboxylic acid metabolic process 995
              alpha-amino acid metabolic process 210
                D-amino acid metabolic process 3
                  D-alanine metabolic process + 1
                  D-amino acid biosynthetic process + 1
                  D-amino acid catabolic process + 2
                  D-arginine metabolic process 0
                  D-cysteine metabolic process + 0
                  D-glutamate metabolic process 0
                  D-glutamine metabolic process 0
                  D-leucine metabolic process + 0
                  D-lysine metabolic process + 0
                  D-ornithine metabolic process 0
                  D-serine metabolic process + 2
                  D-tyrosine metabolic process + 0
                  D-valine metabolic process + 0
                  octopine metabolic process + 0
paths to the root