Ddo (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 20 | 45,673,486 - 45,693,056 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 20 | 44,090,823 - 44,109,962 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 20 | 44,090,914 - 44,133,095 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 20 | 45,870,156 - 45,889,246 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 20 | 45,529,289 - 45,548,385 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 20 | 46,247,362 - 46,266,311 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 20 | 48,739,812 - 48,758,958 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 20 | 48,739,639 - 48,758,905 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 20 | 50,384,344 - 50,403,396 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 20 | 44,766,925 - 44,786,836 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 20 | 44,899,117 - 44,918,244 (+) | NCBI | | Celera | | | Cytogenetic Map | 20 | q12 | NCBI | | | | |
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DDO (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 6 | 110,388,321 - 110,415,575 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 6 | 110,391,771 - 110,415,575 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 6 | 110,709,524 - 110,736,778 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 6 | 110,820,076 - 110,843,446 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 6 | 110,820,076 - 110,843,446 | NCBI | | | | | Celera | 6 | 111,460,002 - 111,483,375 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | q21 | NCBI | | | | | HuRef | 6 | 108,280,297 - 108,303,682 (-) | NCBI | | HuRef | | | CHM1_1 | 6 | 110,976,574 - 110,999,941 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 6 | 111,566,803 - 111,594,070 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Ddo (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 10 | 40,505,933 - 40,557,847 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 10 | 40,506,007 - 40,557,843 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 10 | 40,630,011 - 40,681,847 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 10 | 40,630,011 - 40,681,847 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 10 | 40,349,817 - 40,369,737 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 10 | 40,319,451 - 40,338,387 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 10 | 41,519,749 - 41,540,710 (+) | NCBI | | Celera | | | Cytogenetic Map | 10 | B1 | NCBI | | | | | cM Map | 10 | 22.0 | NCBI | | | | |
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Ddo (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955411 | 35,143,735 - 35,163,276 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955411 | 35,142,415 - 35,163,234 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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DDO (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 5 | 130,404,773 - 130,429,463 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 6 | 128,290,785 - 128,315,497 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 6 | 108,199,861 - 108,223,844 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 6 | 112,269,271 - 112,292,980 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 6 | 112,269,271 - 112,292,980 (-) | Ensembl | panpan1.1 | | panPan2 | |
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DDO (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 12 | 67,080,646 - 67,104,429 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 12 | 67,081,329 - 67,104,397 (-) | NCBI | CanFam3.1 | | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 12 | 67,081,329 - 67,104,397 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 12 | 66,885,507 - 66,924,087 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 12 | 67,950,181 - 67,988,830 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 12 | 67,965,688 - 67,988,779 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 12 | 67,316,440 - 67,340,123 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 12 | 67,163,368 - 67,186,153 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 12 | 67,419,791 - 67,458,386 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Ddo (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404946 | 102,005,153 - 102,025,014 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936564 | 6,280,014 - 6,299,856 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936564 | 6,280,890 - 6,299,838 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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DDO (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 1 | 76,391,116 - 76,417,301 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 76,391,112 - 76,417,147 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 85,867,147 - 85,892,926 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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DDO (Chlorocebus sabaeus - green monkey) |
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Ddo (Heterocephalus glaber - naked mole-rat) |
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