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myeloid dendritic cell differentiation - Ontology Report - Rat Genome Database

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ONTOLOGY REPORT - ANNOTATIONS

Term:myeloid dendritic cell differentiation
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Accession:GO:0043011 term browser browse the term
Definition:The process in which a monocyte acquires the specialized features of a dendritic cell, an immunocompetent cell of the lymphoid and hemopoietic systems and skin.
Synonyms:xref: Wikipedia:Dendritic_cell

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myeloid dendritic cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BATF basic leucine zipper ATF-like transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:56,075,768...56,100,749
Ensembl chr14:74,919,115...74,943,652 		JBrowse link
G BATF2 basic leucine zipper ATF-like transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:60,344,306...60,353,448
Ensembl chr11:63,685,121...63,694,280 		JBrowse link
G BATF3 basic leucine zipper ATF-like transcription factor 3 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:23913046) Ensembl
MGI		 PMID:23913046 GO_REF:0000107 NCBI chr 1:188,256,087...188,271,196
Ensembl chr 1:193,116,694...193,131,228 		JBrowse link
G CAMK4 calcium/calmodulin dependent protein kinase IV involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:106,590,803...106,855,592
Ensembl chr 5:112,393,211...112,647,203 		JBrowse link
G CD86 CD86 molecule ISO RGD PMID:21039614 RGD:4892198 NCBI chr 3:119,151,884...119,217,641
Ensembl chr 3:126,059,008...126,124,339 		JBrowse link
G CSF2 colony stimulating factor 2 acts_upstream_of_or_within
involved_in 		IEA Ensembl GO_REF:0000107 NCBI chr 5:127,496,951...127,499,325
Ensembl chr 5:133,660,775...133,663,146 		JBrowse link
G DCSTAMP dendrocyte expressed seven transmembrane protein involved_in ISO (PMID:17713547) UniProt PMID:17713547 NCBI chr 8:100,967,757...100,985,384
Ensembl chr 8:103,121,332...103,138,223 		JBrowse link
G GIMAP5 GTPase, IMAP family member 5 ISO RGD PMID:15922563 RGD:2303773 NCBI chr 7:142,319,479...142,326,035 JBrowse link
G IL4 interleukin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:128,091,342...128,099,886
Ensembl chr 5:134,253,039...134,261,581 		JBrowse link
G IRF4 interferon regulatory factor 4 acts_upstream_of_or_within
involved_in 		IEA
ISO 		(PMID:22992524) Ensembl
UniProt		 PMID:22992524 GO_REF:0000107 NCBI chr 6:206,282...226,487
Ensembl chr 6:342,718...356,654 		JBrowse link
G LOC100976049 dehydrogenase/reductase SDR family member 2, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:4,457,316...4,466,551
Ensembl chr14:22,551,645...22,558,926 		JBrowse link
G LOC100991256 leukocyte immunoglobulin-like receptor subfamily B member 3 acts_upstream_of_or_within ISO (PMID:12021780) MGI PMID:12021780 NCBI chr19:51,148,567...51,154,764 JBrowse link
G LTBR lymphotoxin beta receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:6,514,432...6,521,966
Ensembl chr12:6,422,470...6,438,510 		JBrowse link
G NOTCH2 notch receptor 2 acts_upstream_of_or_within ISO (PMID:23913046) MGI PMID:23913046 NCBI chr 1:82,457,829...82,615,142
Ensembl chr 1:117,538,243...117,612,840 		JBrowse link
G PSEN1 presenilin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:53,718,299...53,802,684
Ensembl chr14:72,579,024...72,663,876 		JBrowse link
G RBPJ recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within ISO (PMID:23913046) MGI PMID:23913046 NCBI chr 4:20,719,548...20,835,439
Ensembl chr 4:25,995,263...26,107,683 		JBrowse link
G RELB RELB proto-oncogene, NF-kB subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:41,948,559...41,987,121
Ensembl chr19:50,554,864...50,590,223 		JBrowse link
G SPI1 Spi-1 proto-oncogene acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:47,301,245...47,326,891
Ensembl chr11:47,853,991...47,880,259 		JBrowse link
G TNFSF9 TNF superfamily member 9 ISO RGD PMID:18687212 RGD:2317345 NCBI chr19:5,558,021...5,562,901
Ensembl chr19:6,476,941...6,483,352 		JBrowse link
G TRAF6 TNF receptor associated factor 6 acts_upstream_of_or_within ISO (PMID:14499111) MGI PMID:14499111 NCBI chr11:36,457,633...36,483,616
Ensembl chr11:36,335,609...36,356,334 		JBrowse link
G UBD ubiquitin D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:29,359,680...29,364,014
Ensembl chr 6:30,018,444...30,022,814 		JBrowse link
Langerhans cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ITGB6 integrin subunit beta 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:47,386,913...47,496,491
Ensembl chr2B:164,764,251...164,867,426 		JBrowse link
G ITGB8 integrin subunit beta 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:21,019,917...21,105,143
Ensembl chr 7:20,336,031...20,415,666 		JBrowse link
G TGFB1 transforming growth factor beta 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973 		JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:30,536,187...30,623,653
Ensembl chr 3:30,854,460...30,938,856 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19315
    immune system process 2524
      leukocyte activation 1007
        myeloid leukocyte activation 279
          myeloid dendritic cell activation 38
            myeloid dendritic cell differentiation 25
              Langerhans cell differentiation 4
              myeloid dendritic cell differentiation involved in immune response 0
Path 2
Term Annotations click to browse term
  biological_process 19315
    cellular process 18868
      cellular developmental process 4505
        cell differentiation 4504
          cell development 3203
            hemopoiesis 1032
              leukocyte differentiation 665
                mononuclear cell differentiation 537
                  dendritic cell differentiation 57
                    myeloid dendritic cell differentiation 25
                      Langerhans cell differentiation 4
                      myeloid dendritic cell differentiation involved in immune response 0
paths to the root