LOC100991256 (leukocyte immunoglobulin-like receptor subfamily B member 3) - Rat Genome Database

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Gene: LOC100991256 (leukocyte immunoglobulin-like receptor subfamily B member 3) Pan paniscus
Analyze
Symbol: LOC100991256
Name: leukocyte immunoglobulin-like receptor subfamily B member 3
RGD ID: 11803214
Description: ENCODES a protein that exhibits amyloid-beta binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN B cell homeostasis (ortholog); B cell mediated immunity (ortholog); cytokine-mediated signaling pathway (ortholog); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: leukocyte immunoglobulin like receptor B3; leukocyte immunoglobulin-like receptor subfamily A member 6; LILRB3
RGD Orthologs
Human
Mouse
Rat
Dog
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22060,219,542 - 60,227,293 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11962,142,235 - 62,148,611 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01951,148,567 - 51,154,764 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11959,989,855 - 60,015,767 (-)NCBIpanpan1.1PanPan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
LOC100991256
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22060,219,542 - 60,227,293 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11962,142,235 - 62,148,611 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01951,148,567 - 51,154,764 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11959,989,855 - 60,015,767 (-)NCBIpanpan1.1PanPan1.1panPan2
LILRB3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381954,216,278 - 54,223,007 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1954,216,278 - 54,223,506 (-)EnsemblGRCh38hg38GRCh38
GRCh371954,720,147 - 54,746,631 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361959,411,959 - 59,418,771 (-)NCBINCBI36Build 36hg18NCBI36
Build 341959,412,548 - 59,438,461NCBI
Celera1951,761,822 - 51,864,872 (-)NCBICelera
Cytogenetic Map19q13.42NCBI
HuRef1951,035,967 - 51,040,525 (-)NCBIHuRef
CHM1_11954,721,297 - 54,728,106 (-)NCBICHM1_1
T2T-CHM13v2.01957,296,666 - 57,303,395 (-)NCBIT2T-CHM13v2.0
Pirb
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3973,715,504 - 3,723,381 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl73,714,408 - 3,723,390 (-)EnsemblGRCm39 Ensembl
GRCm3873,712,505 - 3,720,382 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl73,711,409 - 3,720,391 (-)EnsemblGRCm38mm10GRCm38
MGSCv3773,664,107 - 3,671,984 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3673,315,619 - 3,323,469 (-)NCBIMGSCv36mm8
Celera73,626,073 - 3,649,918 (-)NCBICelera
Cytogenetic Map7A1NCBI
cM Map72.14NCBI
Pirb
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8174,414,556 - 74,433,015 (+)NCBIGRCr8
mRatBN7.2165,499,195 - 65,506,666 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl165,499,195 - 65,506,666 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0164,005,797 - 64,013,268 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl164,074,231 - 64,081,438 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl163,759,638 - 64,013,289 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0162,998,083 - 63,005,523 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.0163,066,408 - 63,073,848 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4163,812,260 - 63,819,599 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera163,224,301 - 63,231,772 (+)NCBICelera
Cytogenetic Map1q12NCBI
LOC611446
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11102,955,916 - 102,978,669 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1103,033,688 - 103,040,386 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01103,617,135 - 103,623,833 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11103,259,746 - 103,266,445 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01103,015,519 - 103,022,218 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01103,730,424 - 103,737,122 (+)NCBIUU_Cfam_GSD_1.0


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_034946400   ⟹   XP_034802291
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22060,219,542 - 60,227,285 (-)NCBI
NHGRI_mPanPan11962,142,235 - 62,148,611 (-)NCBI
Mhudiblu_PPA_v01951,148,567 - 51,154,763 (-)NCBI
RefSeq Acc Id: XM_034946401   ⟹   XP_034802292
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22060,219,542 - 60,227,285 (-)NCBI
NHGRI_mPanPan11962,142,235 - 62,148,611 (-)NCBI
Mhudiblu_PPA_v01951,148,567 - 51,154,763 (-)NCBI
RefSeq Acc Id: XM_034946402   ⟹   XP_034802293
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22060,219,542 - 60,227,285 (-)NCBI
NHGRI_mPanPan11962,142,235 - 62,148,611 (-)NCBI
Mhudiblu_PPA_v01951,148,567 - 51,154,763 (-)NCBI
RefSeq Acc Id: XM_034946403   ⟹   XP_034802294
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22060,219,542 - 60,227,285 (-)NCBI
NHGRI_mPanPan11962,142,235 - 62,148,611 (-)NCBI
Mhudiblu_PPA_v01951,148,567 - 51,154,763 (-)NCBI
RefSeq Acc Id: XR_004667995
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22060,222,594 - 60,227,293 (-)NCBI
NHGRI_mPanPan11962,143,925 - 62,148,611 (-)NCBI
Mhudiblu_PPA_v01951,150,075 - 51,154,764 (-)NCBI
Protein Sequences
Protein RefSeqs XP_034802291 (Get FASTA)   NCBI Sequence Viewer  
  XP_034802292 (Get FASTA)   NCBI Sequence Viewer  
  XP_034802293 (Get FASTA)   NCBI Sequence Viewer  
  XP_034802294 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000027416.1
RefSeq Acc Id: XP_034802294   ⟸   XM_034946403
- Peptide Label: isoform X4
- UniProtKB: A0A2R9BGK9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034802293   ⟸   XM_034946402
- Peptide Label: isoform X3
- UniProtKB: A0A2R9BGK9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034802292   ⟸   XM_034946401
- Peptide Label: isoform X2
RefSeq Acc Id: XP_034802291   ⟸   XM_034946400
- Peptide Label: isoform X1
Protein Domains
Ig-like


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000036768 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000050256.1 UniProtKB/TrEMBL
Gene3D-CATH Immunoglobulins UniProtKB/TrEMBL
InterPro Ig-like_dom UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Ig-like_Receptors_ImmuneReg UniProtKB/TrEMBL
  Ig_sub UniProtKB/TrEMBL
  Ig_sub2 UniProtKB/TrEMBL
  Immunoglobulin UniProtKB/TrEMBL
NCBI Gene LOC100991256 ENTREZGENE
PANTHER LEUKOCYTE IMMUNOGLOBULIN-LIKE RECEPTOR SUBFAMILY A MEMBER 5 UniProtKB/TrEMBL
  MHC CLASS I NK CELL RECEPTOR UniProtKB/TrEMBL
Pfam Ig_2 UniProtKB/TrEMBL
  PF00047 UniProtKB/TrEMBL
PROSITE IG_LIKE UniProtKB/TrEMBL
SMART IGc2 UniProtKB/TrEMBL
  SM00409 UniProtKB/TrEMBL
Superfamily-SCOP Immunoglobulin UniProtKB/TrEMBL
UniProt A0A2R9BGK9 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-07-01 LOC100991256  leukocyte immunoglobulin-like receptor subfamily B member 3  LILRB3  leukocyte immunoglobulin like receptor B3  Symbol and/or name change 5135510 APPROVED
2018-05-08 LILRB3  leukocyte immunoglobulin like receptor B3  LOC100991256  leukocyte immunoglobulin-like receptor subfamily A member 6  Symbol and/or name change 5135510 APPROVED