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ONTOLOGY REPORT - ANNOTATIONS

Term:cytosolic ribosome assembly
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Accession:GO:0042256 term browser browse the term
Definition:The aggregation, arrangement and bonding together of the large and small ribosomal subunits into a functional cytosolic ribosome. Distinct stages of this process take place first in the nucleolus, then in the nucleus and finally in the cytosol.
Synonyms:exact_synonym: mature ribosome assembly

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cytosolic ribosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1QBP complement C1q binding protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:4,843,202...4,850,639
Ensembl chr16:4,843,438...4,850,600 		JBrowse link
G DDX3X DEAD-box helicase 3 X-linked involved_in ISO (PMID:22323517) UniProt PMID:22323517 NCBI chr  X:38,513,251...38,539,982
Ensembl chr  Y:689,380...706,092 		JBrowse link
G EFL1 elongation factor like GTPase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr26:1,134,150...1,270,216
Ensembl chr26:1,134,208...1,270,885 		JBrowse link
G EIF6 eukaryotic translation initiation factor 6 involved_in IEA UniProt
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chr 2:56,185,419...56,190,993
Ensembl chr 2:56,184,679...56,191,012 		JBrowse link
G NSUN4 NOP2/Sun RNA methyltransferase 4 involved_in ISO (MGI:5573024|PMID:24516400) UniProt PMID:24516400 MGI:5573024 NCBI chr20:86,432,047...86,453,481
Ensembl chr20:86,432,414...86,453,157 		JBrowse link
G SBDS SBDS ribosome maturation factor involved_in IEA InterPro GO_REF:0000002 NCBI chr28:2,527,395...2,535,152
Ensembl chr28:2,527,020...2,535,147 		JBrowse link
90S preribosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RPL38 ribosomal protein L38 acts_upstream_of_or_within ISO (PMID:21529712) MGI PMID:21529712 NCBI chr16:47,425,014...47,432,401 JBrowse link
small-subunit processome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABT1 activator of basal transcription 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:45,617,425...45,619,634
Ensembl chr17:45,616,617...45,619,681 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:43,915,226...44,119,547
Ensembl chr 8:43,914,636...44,119,541 		JBrowse link
G XRCC5 X-ray repair cross complementing 5 involved_in ISO (PMID:32103174) UniProt PMID:32103174 NCBI chr10:101,952,909...102,051,059
Ensembl chr10:101,953,067...102,049,964 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16925
    cellular process 15870
      cellular component organization or biogenesis 6767
        cellular component biogenesis 3359
          ribonucleoprotein complex biogenesis 467
            ribosome biogenesis 338
              ribosome assembly 65
                cytosolic ribosome assembly 10
                  90S preribosome assembly 1
                  cytosolic large ribosomal subunit assembly 0
                  cytosolic small ribosomal subunit assembly + 3
Path 2
Term Annotations click to browse term
  biological_process 16925
    cellular process 15870
      cellular component organization or biogenesis 6767
        cellular component organization 6531
          organelle organization 3670
            organelle assembly 1046
              non-membrane-bounded organelle assembly 436
                ribosome assembly 65
                  cytosolic ribosome assembly 10
                    90S preribosome assembly 1
                    cytosolic large ribosomal subunit assembly 0
                    cytosolic small ribosomal subunit assembly + 3
paths to the root