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ONTOLOGY REPORT - ANNOTATIONS

Term:long-chain fatty acid binding
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Accession:GO:0036041 term browser browse the term
Definition:Binding to a long-chain fatty acid. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.
Comment:While there is not universal consensus on the lengths of short-, medium-, long- and very-long-chain fatty acids, the GO uses the definitions in ChEBI (see CHEBI:26666, CHEBI:59554, CHEBI:15904 and CHEBI:27283).

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long-chain fatty acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fabp3 fatty acid binding protein 3 enables IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624764:14,698,062...14,705,379
Ensembl chrNW_004624764:14,698,062...14,705,972 		JBrowse link
G LOC101706814 fatty acid-binding protein, adipocyte enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624744:9,956,166...9,960,442
Ensembl chrNW_004624744:9,956,053...9,960,552 		JBrowse link
G Prr7 proline rich 7, synaptic enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:12,632,297...12,633,521
Ensembl chrNW_004624733:12,632,309...12,633,729 		JBrowse link
G Rida reactive intermediate imine deaminase A homolog ISO RGD PMID:10101265 RGD:9685549 NCBI chrNW_004624763:5,249,905...5,263,994
Ensembl chrNW_004624763:5,247,715...5,263,880 		JBrowse link
G Ucp1 uncoupling protein 1 enables IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004625006:155,179...162,544
Ensembl chrNW_004625006:155,100...162,551 		JBrowse link
arachidonic acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox5ap arachidonate 5-lipoxygenase activating protein enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624776:7,475,269...7,646,805
Ensembl chrNW_004624776:7,475,200...7,506,283 		JBrowse link
G Gpr31 G protein-coupled receptor 31 enables ISO (PMID:21712392) UniProt PMID:21712392 NCBI chrNW_004624785:12,155,797...12,158,107 JBrowse link
G Hnf4a hepatocyte nuclear factor 4 alpha ISO RGD PMID:11940586 RGD:625581 NCBI chrNW_004624790:10,039,344...10,065,167
Ensembl chrNW_004624790:10,038,999...10,100,649 		JBrowse link
G Pparg peroxisome proliferator activated receptor gamma enables ISO (MGI:3793920|PMID:9568715) BHF-UCL PMID:9568715 MGI:3793920 NCBI chrNW_004624956:84,673...207,176
Ensembl chrNW_004624956:83,842...149,481 		JBrowse link
G Snca synuclein alpha enables ISO (PMID:16734431) MGI PMID:16734431 NCBI chrNW_004624757:17,393,046...17,528,783
Ensembl chrNW_004624757:17,392,998...17,528,320 		JBrowse link
G Stx3 syntaxin 3 enables ISO PMID:16598260 HGNC-UCL PMID:16598260 RGD:8553500 NCBI chrNW_004624864:1,054,130...1,091,071
Ensembl chrNW_004624864:1,054,284...1,090,398 		JBrowse link
G Tmem175 transmembrane protein 175 enables ISO (PMID:35750034) UniProt PMID:35750034 NCBI chrNW_004624755:26,190,547...26,200,512
Ensembl chrNW_004624755:26,190,547...26,207,793 		JBrowse link
icosatetraenoic acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fabp3 fatty acid binding protein 3 ISO RGD PMID:11170430 RGD:1582405 NCBI chrNW_004624764:14,698,062...14,705,379
Ensembl chrNW_004624764:14,698,062...14,705,972 		JBrowse link
linoleic acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppard peroxisome proliferator activated receptor delta enables ISO (PMID:10198642) UniProt PMID:10198642 NCBI chrNW_004624754:22,021,465...22,084,320 JBrowse link
oleic acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule (CD36 blood group) ISO RGD PMID:8320718 RGD:6893566 NCBI chrNW_004624739:29,341,620...29,441,232
Ensembl chrNW_004624739:29,407,568...29,441,333 		JBrowse link
G Fabp3 fatty acid binding protein 3 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:14,698,062...14,705,379
Ensembl chrNW_004624764:14,698,062...14,705,972 		JBrowse link
G Scp2 sterol carrier protein 2 enables ISO (PMID:18465878) UniProt PMID:18465878 NCBI chrNW_004624859:106,405...252,870
Ensembl chrNW_004624859:107,258...252,756 		JBrowse link
stearic acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf4a hepatocyte nuclear factor 4 alpha ISO RGD PMID:11940586 RGD:625581 NCBI chrNW_004624790:10,039,344...10,065,167
Ensembl chrNW_004624790:10,038,999...10,100,649 		JBrowse link
G Pitpna phosphatidylinositol transfer protein alpha enables ISO PMID:12641450 UniProt PMID:12641450 RGD:8553638 NCBI chrNW_004624786:4,238,500...4,274,890
Ensembl chrNW_004624786:4,242,046...4,274,625 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 16311
    binding 14837
      lipid binding 731
        fatty acid binding 45
          long-chain fatty acid binding 16
            5(S)-hydroxyperoxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding 0
            5-hydroxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding 0
            5-oxo-6E,8Z,11Z,14Z-icosatetraenoic acid binding 0
            icosatetraenoic acid binding + 8
            isopentadecanoic acid binding 0
            linoleic acid binding 1
            oleic acid binding 3
            stearic acid binding 2
Path 2
Term Annotations click to browse term
  molecular_function 16311
    binding 14837
      small molecule binding 4415
        ion binding 4214
          anion binding 2023
            carboxylic acid binding 169
              monocarboxylic acid binding 66
                fatty acid binding 45
                  long-chain fatty acid binding 16
                    5(S)-hydroxyperoxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding 0
                    5-hydroxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding 0
                    5-oxo-6E,8Z,11Z,14Z-icosatetraenoic acid binding 0
                    icosatetraenoic acid binding + 8
                    isopentadecanoic acid binding 0
                    linoleic acid binding 1
                    oleic acid binding 3
                    stearic acid binding 2
paths to the root