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ONTOLOGY REPORT - ANNOTATIONS

Term:vesicle cargo loading
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Accession:GO:0035459 term browser browse the term
Definition:The formation of a macromolecular complex between the coat proteins and proteins and/or lipoproteins that are going to be transported by a vesicle.
Synonyms:exact_synonym: cargo loading into vesicle;   cargo selection

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vesicle cargo loading term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTAGE1 cutaneous T cell lymphoma-associated antigen 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:58,092,734...58,100,018
Ensembl chr18:58,093,110...58,099,989 		JBrowse link
G KIF13A kinesin family member 13A involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:54,156,948...54,389,141
Ensembl chr17:54,156,969...54,390,502 		JBrowse link
G LOC103214433 cTAGE family member 2-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:27,804,604...27,807,690 JBrowse link
G LOC103214471 cTAGE family member 2-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:29,792,746...29,795,850 JBrowse link
G LOC103226467 cTAGE family member 8-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:45,609,150...45,612,057 JBrowse link
G LOC103238818 cTAGE family member 8-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:82,665,174...82,667,987 JBrowse link
G MIA2 MIA SH3 domain ER export factor 2 involved_in ISO (PMID:27138255), (PMID:27170179) UniProt PMID:27138255 PMID:27170179 NCBI chr24:15,997,817...16,127,881 JBrowse link
G MIA3 MIA SH3 domain ER export factor 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr25:6,901,891...6,954,556
Ensembl chr25:6,902,425...6,954,526 		JBrowse link
G PICALM phosphatidylinositol binding clathrin assembly protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:77,214,391...77,325,626
Ensembl chr 1:77,213,836...77,324,875 		JBrowse link
COPII-coated vesicle cargo loading term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CIDEB cell death inducing DFFA like effector b involved_in IEA Ensembl GO_REF:0000107 Ensembl chr24:1,287,932...1,291,573 JBrowse link
G MIA3 MIA SH3 domain ER export factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:6,901,891...6,954,556
Ensembl chr25:6,902,425...6,954,526 		JBrowse link
G RAB1A RAB1A, member RAS oncogene family involved_in ISO (PMID:17684057) UniProt PMID:17684057 NCBI chr14:41,890,055...41,932,180 JBrowse link
G SAR1A secretion associated Ras related GTPase 1A involved_in ISO (PMID:23433038)
(PMID:17499046), (PMID:18843296)		 UniProt PMID:17499046 PMID:18843296 PMID:23433038 NCBI chr 9:61,134,657...61,154,551
Ensembl chr 9:61,144,503...61,154,226 		JBrowse link
G SAR1B secretion associated Ras related GTPase 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:37,409,666...37,433,462
Ensembl chr23:37,406,770...37,444,447 		JBrowse link
G SEC13 SEC13 homolog, nuclear pore and COPII coat complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:46,336,909...46,357,435
Ensembl chr22:46,336,829...46,355,723 		JBrowse link
G SEC23A SEC23 homolog A, COPII coat complex component involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr24:15,801,945...15,874,938
Ensembl chr24:15,801,509...15,874,994 		JBrowse link
G SEC23B SEC23 homolog B, COPII coat complex component involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:47,569,734...47,618,229
Ensembl chr 2:47,569,727...47,618,295 		JBrowse link
G SEC24A SEC24 homolog A, COPII coat complex component involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr23:37,448,344...37,501,745 JBrowse link
G SEC24B SEC24 homolog B, COPII coat complex component involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:57,363,133...57,463,056
Ensembl chr 7:57,387,167...57,462,276 		JBrowse link
G SEC24C SEC24 homolog C, COPII coat complex component involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:57,600,783...57,628,501
Ensembl chr 9:57,601,863...57,626,038 		JBrowse link
G SEC24D SEC24 homolog D, COPII coat complex component involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:66,208,005...66,318,222
Ensembl chr 7:66,207,765...66,318,206 		JBrowse link
G SEC31A SEC31 homolog A, COPII coat complex component involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:31,207,349...31,288,484
Ensembl chr 7:31,207,089...31,288,574 		JBrowse link
G SEC31B SEC31 homolog B, COPII coat complex component involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:93,505,655...93,537,525
Ensembl chr 9:93,506,626...93,537,155 		JBrowse link
G SURF4 surfeit 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:4,759,307...4,775,227
Ensembl chr12:4,759,388...4,776,219 		JBrowse link
G TBC1D20 TBC1 domain family member 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:56,065,975...56,093,521
Ensembl chr 2:56,066,042...56,094,333 		JBrowse link
negative regulation of cargo loading into COPII-coated vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G INSIG1 insulin induced gene 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:123,448,614...123,460,778
Ensembl chr21:123,449,106...123,460,807 		JBrowse link
G SAR1A secretion associated Ras related GTPase 1A acts_upstream_of_or_within ISO (PMID:23580231) MGI PMID:23580231 NCBI chr 9:61,134,657...61,154,551
Ensembl chr 9:61,144,503...61,154,226 		JBrowse link
regulation of cargo loading into COPII-coated vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SAR1A secretion associated Ras related GTPase 1A acts_upstream_of_or_within ISO (PMID:19966784) MGI PMID:19966784 NCBI chr 9:61,134,657...61,154,551
Ensembl chr 9:61,144,503...61,154,226 		JBrowse link
G SEC24B SEC24 homolog B, COPII coat complex component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19966784) Ensembl
MGI		 PMID:19966784 GO_REF:0000107 NCBI chr 7:57,363,133...57,463,056
Ensembl chr 7:57,387,167...57,462,276 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17042
    cellular process 16559
      vesicle-mediated transport 1559
        vesicle cargo loading 25
          COPII-coated vesicle cargo loading + 17
          clathrin-coated vesicle cargo loading + 0
Path 2
Term Annotations click to browse term
  biological_process 17042
    localization 5410
      establishment of localization 4707
        transport 4401
          vesicle-mediated transport 1559
            vesicle cargo loading 25
              COPII-coated vesicle cargo loading + 17
              clathrin-coated vesicle cargo loading + 0
paths to the root