LOC103214433 (cTAGE family member 2-like) - Rat Genome Database

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Gene: LOC103214433 (cTAGE family member 2-like) Chlorocebus sabaeus
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Symbol: LOC103214433
Name: cTAGE family member 2-like
RGD ID: 18676227
Description: INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (inferred); protein secretion (inferred); vesicle cargo loading (inferred); FOUND IN endoplasmic reticulum exit site (inferred); endoplasmic reticulum membrane (inferred); membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: cTAGE family member 5-like
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1327,804,604 - 27,807,690 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605716,076,972 - 16,079,436 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References
Additional References at PubMed
PMID:30032202  


Genomics

Variants

.
Variants in LOC103214433
60 total Variants

Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_007960418 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACDXN010000025 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_007960418   ⟹   XP_007958609
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1327,804,604 - 27,807,690 (+)NCBI
Vero_WHO_p1.0NW_02366605716,076,972 - 16,079,436 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_007958609 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000013709.1
RefSeq Acc Id: XP_007958609   ⟸   XM_007960418
- UniProtKB: A0A0D9RYM0 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000017685 UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000015780.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.287.1490 UniProtKB/TrEMBL
InterPro cTAGE_MIA/OTOR UniProtKB/TrEMBL
NCBI Gene LOC103214433 ENTREZGENE
PANTHER MELANOMA INHIBITORY ACTIVITY-RELATED UniProtKB/TrEMBL
  PTHR23158:SF55 UniProtKB/TrEMBL
UniProt A0A0D9RYM0 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-12-08 LOC103214433  cTAGE family member 2-like  LOC103214433  cTAGE family member 5-like  Symbol and/or name change 5135510 APPROVED