Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:cerebral cortex GABAergic interneuron differentiation
go back to main search page
Accession:GO:0021892 term browser browse the term
Definition:The process in which a relatively unspecialized cell acquires specialized features of a GABAergic interneuron residing in the cerebral cortex.

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
cerebral cortex GABAergic interneuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:98,182,213...98,185,057
Ensembl chr11:98,182,787...98,183,506 		JBrowse link
G DLX1 distal-less homeobox 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15028753) MGI
Ensembl		 PMID:15028753 GO_REF:0000107 NCBI chr10:57,586,452...57,599,071
Ensembl chr10:57,590,838...57,595,266 		JBrowse link
G DLX2 distal-less homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15028753) Ensembl
MGI		 PMID:15028753 GO_REF:0000107 NCBI chr10:57,604,989...57,609,487
Ensembl chr10:57,606,084...57,608,079 		JBrowse link
G NKX2-1 NK2 homeobox 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18786356)
(PMID:15028753)		 MGI
Ensembl		 PMID:15028753 PMID:18786356 GO_REF:0000107 NCBI chr24:13,274,118...13,317,533
Ensembl chr24:13,310,846...13,317,056 		JBrowse link
cerebral cortex GABAergic interneuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRNA2 cholinergic receptor nicotinic alpha 2 subunit part_of ISO RGD PMID:17046198 RGD:152995358 NCBI chr 8:25,571,958...25,591,982
Ensembl chr 8:25,571,863...25,591,788 		JBrowse link
G RAC1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (PMID:23258346) MGI PMID:23258346 NCBI chr28:15,583,609...15,610,753
Ensembl chr28:15,583,516...15,610,328 		JBrowse link
G RAC3 Rac family small GTPase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23258346) Ensembl
MGI		 PMID:23258346 GO_REF:0000107 NCBI chr16:73,919,086...73,921,647
Ensembl chr16:73,919,128...73,925,277 		JBrowse link
cerebral cortex GABAergic interneuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLX1 distal-less homeobox 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17678855) MGI
Ensembl		 PMID:17678855 GO_REF:0000107 NCBI chr10:57,586,452...57,599,071
Ensembl chr10:57,590,838...57,595,266 		JBrowse link
G DLX2 distal-less homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17678855) Ensembl
MGI		 PMID:17678855 GO_REF:0000107 NCBI chr10:57,604,989...57,609,487
Ensembl chr10:57,606,084...57,608,079 		JBrowse link
cerebral cortex GABAergic interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARX aristaless related homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17460091) Ensembl
MGI		 PMID:17460091 GO_REF:0000107 NCBI chr  X:23,499,791...23,518,333
Ensembl chr  X:23,500,454...23,511,524 		JBrowse link
G CNTN2 contactin 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11714688) MGI
Ensembl		 PMID:11714688 GO_REF:0000107 NCBI chr25:24,262,092...24,296,740
Ensembl chr25:24,261,651...24,296,850 		JBrowse link
G DRD1 dopamine receptor D1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17409246) Ensembl
MGI		 PMID:17409246 GO_REF:0000107 NCBI chr23:77,587,340...77,591,434 JBrowse link
G DRD2 dopamine receptor D2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17409246) Ensembl
MGI		 PMID:17409246 GO_REF:0000107 NCBI chr 1:104,774,632...104,843,417
Ensembl chr 1:104,774,180...104,842,736 		JBrowse link
G FEZF2 FEZ family zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21338885) Ensembl
MGI		 PMID:21338885 GO_REF:0000107 NCBI chr22:23,442,699...23,453,026
Ensembl chr22:23,443,114...23,445,908 		JBrowse link
G LHX6 LIM homeobox 6 acts_upstream_of_or_within ISO (PMID:17376969) MGI PMID:17376969 NCBI chr12:17,364,693...17,392,756
Ensembl chr12:17,366,826...17,386,276 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17043
    developmental process 6815
      anatomical structure development 6397
        forebrain development 564
          cerebral cortex neuron differentiation 33
            cerebral cortex GABAergic interneuron differentiation 13
              cerebral cortex GABAergic interneuron development + 9
              cerebral cortex GABAergic interneuron fate commitment 2
Path 2
Term Annotations click to browse term
  biological_process 17043
    developmental process 6815
      anatomical structure development 6397
        multicellular organism development 5149
          system development 4462
            nervous system development 2796
              neurogenesis 2059
                generation of neurons 1783
                  neuron differentiation 1700
                    central nervous system neuron differentiation 251
                      cerebral cortex neuron differentiation 33
                        cerebral cortex GABAergic interneuron differentiation 13
                          cerebral cortex GABAergic interneuron development + 9
                          cerebral cortex GABAergic interneuron fate commitment 2
paths to the root