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ONTOLOGY REPORT - ANNOTATIONS

Term:short-chain fatty acid catabolic process
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Accession:GO:0019626 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a short-chain fatty acid. A short-chain fatty acid has an aliphatic tail containing fewer than 6 carbons.
Comment:While there is not universal consensus on the lengths of short-, medium-, long- and very-long-chain fatty acids, the GO uses the definitions in ChEBI (see CHEBI:26666, CHEBI:59554, CHEBI:15904 and CHEBI:27283).
Synonyms:exact_synonym: short-chain fatty acid breakdown;   short-chain fatty acid catabolism;   short-chain fatty acid degradation
 xref: MetaCyc:ACETOACETATE-DEG-PWY


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2-oxobutyrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHYH phytanoyl-CoA 2-hydroxylase ISO RGD PMID:10588950 RGD:727286 NCBI chr10:13,277,804...13,300,115
Ensembl chr10:13,251,223...13,636,018 		JBrowse link
butyrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADS acyl-CoA dehydrogenase short chain involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:3968063 GO_REF:0000118 RGD:2317678 NCBI chr12:118,309,303...118,323,489
Ensembl chr12:121,682,113...121,696,376 		JBrowse link
propionate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PCK1 phosphoenolpyruvate carboxykinase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:53,901,738...53,907,090
Ensembl chr20:55,179,429...55,184,920 		JBrowse link
G PCK2 phosphoenolpyruvate carboxykinase 2, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:4,872,276...4,882,118
Ensembl chr14:22,996,813...23,006,775 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16624
    cellular process 16183
      metabolic process 10746
        catabolic process 2484
          lipid catabolic process 328
            fatty acid catabolic process 104
              short-chain fatty acid catabolic process 4
                2-oxobutyrate catabolic process 1
                acetoacetic acid catabolic process 0
                butyrate catabolic process 1
                propionate catabolic process + 2
Path 2
Term Annotations click to browse term
  biological_process 16624
    cellular process 16183
      metabolic process 10746
        small molecule metabolic process 1683
          organic acid metabolic process 919
            oxoacid metabolic process 911
              carboxylic acid metabolic process 891
                carboxylic acid catabolic process 234
                  monocarboxylic acid catabolic process 129
                    fatty acid catabolic process 104
                      short-chain fatty acid catabolic process 4
                        2-oxobutyrate catabolic process 1
                        acetoacetic acid catabolic process 0
                        butyrate catabolic process 1
                        propionate catabolic process + 2
paths to the root