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ONTOLOGY REPORT - ANNOTATIONS

Term:citrulline biosynthetic process
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Accession:GO:0019240 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of citrulline, N5-carbamoyl-L-ornithine, an alpha amino acid not found in proteins.
Synonyms:exact_synonym: citrulline anabolism;   citrulline biosynthesis;   citrulline formation;   citrulline synthesis
 xref: MetaCyc:CITRULBIO-PWY


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citrulline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH18A1 aldehyde dehydrogenase 18 family member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:92,216,639...92,267,525
Ensembl chr10:95,723,099...95,774,095 		JBrowse link
G CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:7053379 GO_REF:0000118 RGD:10755426 NCBI chr2A:27,218,699...27,245,156
Ensembl chr2A:27,306,527...27,332,804 		JBrowse link
G OTC ornithine transcarbamylase involved_in ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:9472964 GO_REF:0000107 GO_REF:0000118 RGD:4144071 NCBI chr  X:30,796,828...30,868,144
Ensembl chr  X:38,505,232...38,575,819 		JBrowse link
negative regulation of citrulline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B4 ATPase plasma membrane Ca2+ transporting 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:179,231,712...179,348,759
Ensembl chr 1:183,580,773...183,639,882 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19447
    cellular process 19000
      metabolic process 12941
        biosynthetic process 9833
          amino acid biosynthetic process 75
            alpha-amino acid biosynthetic process 66
              citrulline biosynthetic process 4
                negative regulation of citrulline biosynthetic process 1
                positive regulation of citrulline biosynthetic process 0
                regulation of citrulline biosynthetic process + 1
Path 2
Term Annotations click to browse term
  biological_process 19447
    cellular process 19000
      metabolic process 12941
        small molecule metabolic process 1677
          organic acid metabolic process 909
            oxoacid metabolic process 900
              carboxylic acid metabolic process 880
                non-proteinogenic amino acid metabolic process 74
                  citrulline metabolic process 8
                    citrulline biosynthetic process 4
                      negative regulation of citrulline biosynthetic process 1
                      positive regulation of citrulline biosynthetic process 0
                      regulation of citrulline biosynthetic process + 1
paths to the root