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ONTOLOGY REPORT - ANNOTATIONS

Term:glycosaminoglycan catabolic process
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Accession:GO:0006027 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars.
Synonyms:exact_synonym: glycosaminoglycan breakdown;   glycosaminoglycan catabolism;   glycosaminoglycan degradation

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glycosaminoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HYAL2 hyaluronidase 2 involved_in ISO (PMID:9712871) UniProt PMID:9712871 NCBI chr22:11,704,422...11,710,013
Ensembl chr22:11,703,790...11,709,454 		JBrowse link
G IDS iduronate 2-sulfatase involved_in ISO (PMID:28593992) UniProt PMID:28593992
G IDUA alpha-L-iduronidase acts_upstream_of_or_within ISO (PMID:19834056)
(PMID:19751987)
(PMID:16979922), (PMID:22580166)
(PMID:21873421)		 RGD
MGI		 PMID:6138357 PMID:16979922 PMID:19751987 PMID:19834056 PMID:21873421 More... RGD:1599427 NCBI chr27:47,778,220...47,794,435
Ensembl chr27:47,778,335...47,794,352 		JBrowse link
G LOC103232717 iduronate 2-sulfatase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:124,187,554...124,214,764
Ensembl chr  X:124,191,390...124,214,157 		JBrowse link
G LYVE1 lymphatic vessel endothelial hyaluronan receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11278811) Ensembl
MGI		 PMID:11278811 GO_REF:0000107 NCBI chr 1:54,252,203...54,268,873
Ensembl chr 1:54,253,495...54,269,598 		JBrowse link
G SGSH N-sulfoglucosamine sulfohydrolase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:72,192,559...72,203,230
Ensembl chr16:72,190,310...72,203,130 		JBrowse link
chondroitin sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HEXB hexosaminidase subunit beta involved_in ISO (PMID:22451654) MGI PMID:22451654 NCBI chr 4:69,037,532...69,065,925
Ensembl chr 4:69,037,583...69,065,814 		JBrowse link
G HYAL1 hyaluronidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:11,689,123...11,693,144
Ensembl chr22:11,688,970...11,693,183 		JBrowse link
G LOC103246571 beta-glucuronidase involved_in ISO (PMID:23897660) MGI PMID:23897660 NCBI chr28:1,621,293...1,646,097
Ensembl chr28:1,620,359...1,646,075 		JBrowse link
dermatan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARSB arylsulfatase B involved_in ISO (PMID:24240681) MGI PMID:24240681 NCBI chr 4:73,016,497...73,203,570
Ensembl chr 4:73,015,980...73,202,439 		JBrowse link
G HEXA hexosaminidase subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:11,081,985...11,130,366
Ensembl chr26:11,082,468...11,116,075 		JBrowse link
G HEXB hexosaminidase subunit beta involved_in ISO (PMID:11707436) MGI PMID:11707436 NCBI chr 4:69,037,532...69,065,925
Ensembl chr 4:69,037,583...69,065,814 		JBrowse link
G IDUA alpha-L-iduronidase involved_in
acts_upstream_of_or_within		 ISO (PMID:24036510)
(PMID:19834056)
(PMID:19751987)
(PMID:25854773)		 UniProt
MGI		 PMID:19751987 PMID:19834056 PMID:24036510 PMID:25854773 NCBI chr27:47,778,220...47,794,435
Ensembl chr27:47,778,335...47,794,352 		JBrowse link
G LOC103232717 iduronate 2-sulfatase involved_in ISO (PMID:30064964) MGI PMID:30064964 NCBI chr  X:124,187,554...124,214,764
Ensembl chr  X:124,191,390...124,214,157 		JBrowse link
heparin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IDUA alpha-L-iduronidase acts_upstream_of_or_within ISO (PMID:21873421)
(PMID:19834056)
(PMID:19751987)		 MGI PMID:19751987 PMID:19834056 PMID:21873421 NCBI chr27:47,778,220...47,794,435
Ensembl chr27:47,778,335...47,794,352 		JBrowse link
hyaluronan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD44 CD44 molecule (IN blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:30,039,854...30,132,646
Ensembl chr 1:30,039,749...30,132,416 		JBrowse link
G CEMIP cell migration inducing hyaluronidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:2,440,075...2,611,636
Ensembl chr26:2,438,706...2,519,563 		JBrowse link
G CEMIP2 cell migration inducing hyaluronidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:82,751,445...82,837,050
Ensembl chr12:82,752,995...82,837,042 		JBrowse link
G FGF2 fibroblast growth factor 2 involved_in ISO (PMID:19577615) UniProt PMID:19577615 NCBI chr 7:70,089,394...70,157,423 JBrowse link
G HEXA hexosaminidase subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:11,081,985...11,130,366
Ensembl chr26:11,082,468...11,116,075 		JBrowse link
G HEXB hexosaminidase subunit beta involved_in ISO (PMID:22451654) MGI PMID:22451654 NCBI chr 4:69,037,532...69,065,925
Ensembl chr 4:69,037,583...69,065,814 		JBrowse link
G HYAL1 hyaluronidase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr22:11,689,123...11,693,144
Ensembl chr22:11,688,970...11,693,183 		JBrowse link
G HYAL2 hyaluronidase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr22:11,704,422...11,710,013
Ensembl chr22:11,703,790...11,709,454 		JBrowse link
G HYAL3 hyaluronidase 3 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr22:11,680,189...11,688,678
Ensembl chr22:11,679,585...11,682,972 		JBrowse link
G LOC103226818 hyaluronidase-4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:92,587,648...92,673,009
Ensembl chr21:92,654,174...92,672,089 		JBrowse link
G LOC103244927 hyaluronan mediated motility receptor involved_in ISO (PMID:26528478) MGI PMID:26528478 NCBI chr23:65,732,343...65,765,511
Ensembl chr23:65,732,553...65,765,511 		JBrowse link
G LOC103246571 beta-glucuronidase involved_in ISO (PMID:20385825) MGI PMID:20385825 NCBI chr28:1,621,293...1,646,097
Ensembl chr28:1,620,359...1,646,075 		JBrowse link
G LYVE1 lymphatic vessel endothelial hyaluronan receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:54,252,203...54,268,873
Ensembl chr 1:54,253,495...54,269,598 		JBrowse link
G SPAM1 sperm adhesion molecule 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:92,738,082...92,744,794
Ensembl chr21:92,738,287...92,744,715 		JBrowse link
G STAB2 stabilin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:98,780,148...98,953,871
Ensembl chr11:98,779,921...98,954,913 		JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:35,651,583...35,674,387
Ensembl chr 6:35,648,677...35,674,365 		JBrowse link
keratan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNS glucosamine (N-acetyl)-6-sulfatase ISO RGD PMID:3161730 RGD:1600571 NCBI chr11:60,390,479...60,434,266
Ensembl chr11:60,388,883...60,434,233 		JBrowse link
peptidoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LYG1 lysozyme g1 involved_in IEA InterPro GO_REF:0000002 NCBI chr14:2,986,476...3,006,837
Ensembl chr14:2,986,634...3,005,561 		JBrowse link
G LYG2 lysozyme g2 involved_in IEA InterPro GO_REF:0000002 Ensembl chr14:2,948,502...2,957,081 JBrowse link
G PGLYRP1 peptidoglycan recognition protein 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:39,474,077...39,478,635
Ensembl chr 6:39,474,170...39,477,914 		JBrowse link
G PGLYRP2 peptidoglycan recognition protein 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:14,072,310...14,084,014
Ensembl chr 6:14,072,423...14,082,798 		JBrowse link
G PGLYRP3 peptidoglycan recognition protein 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr20:10,445,996...10,459,908
Ensembl chr20:10,446,660...10,459,478 		JBrowse link
G PGLYRP4 peptidoglycan recognition protein 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr20:10,406,242...10,422,989
Ensembl chr20:10,405,138...10,422,625 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17080
    metabolic process 11165
      macromolecule metabolic process 9216
        aminoglycan metabolic process 115
          aminoglycan catabolic process 35
            glycosaminoglycan catabolic process 28
              chondroitin sulfate catabolic process 3
              dermatan sulfate catabolic process 5
              galactosaminoglycan catabolic process 0
              heparin catabolic process 1
              hyaluronan catabolic process 16
              keratan sulfate catabolic process 1
              peptidoglycan catabolic process 6
paths to the root