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ONTOLOGY REPORT - ANNOTATIONS

Term:chromatin silencing complex
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Accession:GO:0005677 term browser browse the term
Definition:Any protein complex that mediates changes in chromatin structure that result in transcriptional silencing.


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chromatin silencing complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAHD1 bromo adjacent homology domain containing 1 part_of IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:130,849,835...130,874,735
Ensembl chr 1:130,849,842...130,875,974 		JBrowse link
G BAZ2A bromodomain adjacent to zinc finger domain 2A part_of ISO (MGI:3587127|PMID:16085498), (MGI:3852588|PMID:19578370) UniProt PMID:16085498 PMID:19578370 MGI:3587127 MGI:3852588 NCBI chr 5:21,932,527...21,983,033
Ensembl chr 5:21,936,260...21,983,032 		JBrowse link
G EED embryonic ectoderm development part_of ISO (PMID:26658965) MGI PMID:26658965 NCBI chr 9:20,123,077...20,158,747
Ensembl chr 9:20,123,857...20,158,816 		JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit part_of IEA Ensembl GO_REF:0000107 NCBI chr 9:109,384,976...109,450,943
Ensembl chr 9:109,385,015...109,450,941 		JBrowse link
G RRP8 ribosomal RNA processing 8 part_of IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:3,152,162...3,169,380
Ensembl chr 9:3,152,209...3,162,540 		JBrowse link
G SIRT1 sirtuin 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr14:71,091,167...71,126,351
Ensembl chr14:71,091,167...71,123,297 		JBrowse link
G SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 part_of IEA Ensembl GO_REF:0000107 NCBI chr 8:84,184,572...84,224,943
Ensembl chr 8:84,184,576...84,224,871 		JBrowse link
G SUV39H1 SUV39H1 histone lysine methyltransferase part_of IEA Ensembl GO_REF:0000107 NCBI chr  X:42,797,309...42,811,457
Ensembl chr  X:42,797,828...42,811,461 		JBrowse link
G SUZ12 SUZ12 polycomb repressive complex 2 subunit part_of IEA Ensembl GO_REF:0000107 NCBI chr12:42,983,597...43,032,671
Ensembl chr12:42,983,601...43,032,654 		JBrowse link
G YY1 YY1 transcription factor part_of IEA Ensembl GO_REF:0000107 NCBI chr 7:121,132,168...121,170,699
Ensembl chr 7:121,132,191...121,170,697 		JBrowse link
chromatin lock complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBX3 chromobox 3 located_in
part_of		 ISO
IEA		 (PMID:17540172) ComplexPortal
Ensembl		 PMID:17540172 GO_REF:0000107 NCBI chr18:46,193,138...46,205,114
Ensembl chr18:46,193,140...46,204,714 		JBrowse link
G L3MBTL1 L3MBTL histone methyl-lysine binding protein 1 located_in ISO (PMID:17540172) ComplexPortal PMID:17540172 NCBI chr17:46,135,567...46,176,967
Ensembl chr17:46,136,013...46,173,944 		JBrowse link
G LOC110261685 chromobox protein homolog 3 part_of IEA Ensembl GO_REF:0000107 NCBI chr 7:80,569,216...80,571,089 JBrowse link
G RB1 RB transcriptional corepressor 1 located_in
part_of		 ISO
IEA		 (PMID:17540172) ComplexPortal
Ensembl		 PMID:17540172 GO_REF:0000107 NCBI chr11:19,186,754...19,317,642
Ensembl chr11:19,186,761...19,317,690 		JBrowse link
eNoSc complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RRP8 ribosomal RNA processing 8 located_in
part_of		 ISO
IEA		 (PMID:18485871) ComplexPortal
Ensembl		 PMID:18485871 GO_REF:0000107 NCBI chr 9:3,152,162...3,169,380
Ensembl chr 9:3,152,209...3,162,540 		JBrowse link
G SIRT1 sirtuin 1 located_in
part_of		 ISO
IEA		 (PMID:18485871) ComplexPortal
Ensembl		 PMID:18485871 GO_REF:0000107 NCBI chr14:71,091,167...71,126,351
Ensembl chr14:71,091,167...71,123,297 		JBrowse link
G SUV39H1 SUV39H1 histone lysine methyltransferase located_in
part_of		 ISO
IEA		 (PMID:18485871) ComplexPortal
Ensembl		 PMID:18485871 GO_REF:0000107 NCBI chr  X:42,797,309...42,811,457
Ensembl chr  X:42,797,828...42,811,461 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 18687
    protein-containing complex 6005
      nuclear protein-containing complex 1244
        chromatin silencing complex 14
          RENT complex 0
          chromatin lock complex 4
          eNoSc complex 3
Path 2
Term Annotations click to browse term
  cellular_component 18687
    cellular anatomical entity 18466
      organelle 12444
        membrane-bounded organelle 11406
          intracellular membrane-bounded organelle 10861
            nucleus 6843
              nuclear protein-containing complex 1244
                chromatin silencing complex 14
                  RENT complex 0
                  chromatin lock complex 4
                  eNoSc complex 3
paths to the root