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ONTOLOGY REPORT - ANNOTATIONS

Term:tRNA wobble cytosine modification
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Accession:GO:0002101 term browser browse the term
Definition:The process in which a cytosine in position 34 of a tRNA is post-transcriptionally modified.

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tRNA wobble cytosine modification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alkbh1 alkB homolog 1, histone H2A dioxygenase involved_in ISO (PMID:27497299) UniProt PMID:27497299 NCBI chrNW_004955438:1,531,114...1,556,483
Ensembl chrNW_004955438:1,531,114...1,556,481 		JBrowse link
tRNA wobble base cytosine methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nsun3 NOP2/Sun RNA methyltransferase 3 involved_in ISO (PMID:27214402), (PMID:27356879), (PMID:27497299) UniProt PMID:27214402 PMID:27356879 PMID:27497299 NCBI chrNW_004955407:3,322,246...3,397,289
Ensembl chrNW_004955407:3,342,876...3,397,150 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12362
    metabolic process 7488
      primary metabolic process 6455
        RNA processing 583
          tRNA processing 86
            tRNA modification 58
              tRNA wobble base modification 8
                tRNA wobble cytosine modification 2
                  tRNA wobble base cytosine methylation 1
                  tRNA wobble base lysidine biosynthesis 0
Path 2
Term Annotations click to browse term
  biological_process 12362
    cellular process 11459
      cellular metabolic process 6296
        cellular biosynthetic process 5022
          macromolecule biosynthetic process 4619
            nucleic acid biosynthetic process 2838
              RNA biosynthetic process 2744
                RNA processing 583
                  tRNA processing 86
                    tRNA modification 58
                      tRNA wobble base modification 8
                        tRNA wobble cytosine modification 2
                          tRNA wobble base cytosine methylation 1
                          tRNA wobble base lysidine biosynthesis 0
paths to the root