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ONTOLOGY REPORT - ANNOTATIONS

Term:transcription factor TFIIH core complex
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Accession:GO:0000439 term browser browse the term
Definition:The 7 subunit core of TFIIH that is a part of either the general transcription factor holo-TFIIH or the nucleotide-excision repair factor 3 complex. In S. cerevisiae/humans the complex is composed of: Ssl2/XPB, Tfb1/p62, Tfb2/p52, Ssl1/p44, Tfb4/p34, Tfb5/p8 and Rad3/XPD.
Synonyms:exact_synonym: SSL2-core TFIIH complex;   core TFIIH complex
 alt_id: GO:0000441


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transcription factor TFIIH core complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnh cyclin H part_of ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:85,337,504...85,361,850
Ensembl chr13:85,337,527...85,371,588 		JBrowse link
G Cdk7 cyclin dependent kinase 7 part_of ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:100,833,532...100,867,454
Ensembl chr13:100,839,139...100,867,447 		JBrowse link
G Ercc2 excision repair cross-complementing rodent repair deficiency, complementation group 2 part_of ISO RGD
MGI		 PMID:8855220 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:1642642 NCBI chr 7:19,115,942...19,129,619
Ensembl chr 7:19,115,935...19,129,619 		JBrowse link
G Ercc3 excision repair cross-complementing rodent repair deficiency, complementation group 3 part_of ISO RGD
MGI		 PMID:8855220 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:1642642 NCBI chr18:32,373,357...32,403,206
Ensembl chr18:32,373,353...32,403,204 		JBrowse link
G Gtf2h1 general transcription factor II H, polypeptide 1 part_of ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 7:46,445,518...46,473,224
Ensembl chr 7:46,445,527...46,473,224 		JBrowse link
G Gtf2h2 general transcription factor II H, polypeptide 2 part_of ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:100,596,726...100,629,123
Ensembl chr13:100,596,726...100,629,087 		JBrowse link
G Gtf2h3 general transcription factor IIH, polypeptide 3 part_of IBA GO_Central GO_REF:0000033 NCBI chr 5:124,717,211...124,735,743
Ensembl chr 5:124,717,203...124,735,743 		JBrowse link
G Gtf2h4 general transcription factor II H, polypeptide 4 part_of IBA GO_Central GO_REF:0000033 NCBI chr17:35,978,624...35,984,607
Ensembl chr17:35,978,622...35,984,631 		JBrowse link
G Gtf2h5 general transcription factor IIH, polypeptide 5 part_of IBA GO_Central GO_REF:0000033 NCBI chr17:6,130,103...6,135,763
Ensembl chr17:6,130,061...6,136,792 		JBrowse link
G Mnat1 menage a trois 1 part_of ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:73,158,957...73,320,762
Ensembl chr12:73,170,491...73,320,762 		JBrowse link
core TFIIH complex portion of holo TFIIH complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gtf2h2 general transcription factor II H, polypeptide 2 part_of ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:100,596,726...100,629,123
Ensembl chr13:100,596,726...100,629,087 		JBrowse link
G Gtf2h3 general transcription factor IIH, polypeptide 3 part_of ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:124,717,211...124,735,743
Ensembl chr 5:124,717,203...124,735,743 		JBrowse link
G Gtf2h4 general transcription factor II H, polypeptide 4 part_of ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:35,978,624...35,984,607
Ensembl chr17:35,978,622...35,984,631 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 28585
    protein-containing complex 6177
      transcription regulator complex 563
        RNA polymerase II transcription regulator complex 253
          transcription factor TFIIH core complex 10
            core TFIIH complex portion of NEF3 complex 0
            core TFIIH complex portion of holo TFIIH complex 3
Path 2
Term Annotations click to browse term
  cellular_component 28585
    cellular anatomical entity 19619
      intracellular anatomical structure 14780
        intracellular organelle 13155
          intracellular membrane-bounded organelle 12011
            nucleus 7488
              nuclear protein-containing complex 1285
                RNA polymerase II transcription regulator complex 253
                  transcription factor TFIIH core complex 10
                    core TFIIH complex portion of NEF3 complex 0
                    core TFIIH complex portion of holo TFIIH complex 3
paths to the root