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ONTOLOGY REPORT - ANNOTATIONS


Term:RNA polymerase II transcription regulator complex
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Accession:GO:0090575 term browser browse the term
Definition:A transcription factor complex that acts at a regulatory region of a gene transcribed by RNA polymerase II.
Synonyms:narrow_synonym: RNA polymerase II transcription factor complex



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RNA polymerase II transcription regulator complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07045341.1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr20:42,257,451...42,260,249 JBrowse link
G Adnp activity-dependent neuroprotector homeobox part_of ISO (PMID:29795351) RGD PMID:29795351 NCBI chr 3:156,886,921...156,921,500
Ensembl chr 3:156,891,381...156,917,312
JBrowse link
G Anxa2 annexin A2 located_in ISO (MGI:5469743|PMID:23415230) RGD PMID:23415230 MGI:5469743 NCBI chr 8:70,105,268...70,141,663
Ensembl chr 8:70,105,253...70,141,658
JBrowse link
G Arnt aryl hydrocarbon receptor nuclear translocator part_of IEA
ISO
GO_REF:0000107
(PMID:7539918), (PMID:8756616)
Ensembl
RGD
PMID:7539918 PMID:8756616 GO_REF:0000107 NCBI chr 2:182,997,731...183,056,584
Ensembl chr 2:182,997,736...183,056,580
JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:21,904,153...21,906,003
Ensembl chr 7:21,903,126...21,905,993
JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:198,148,999...198,151,406
Ensembl chr 1:198,148,999...198,151,406
JBrowse link
G Ascl4 achaete-scute family bHLH transcription factor 4 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:17,940,899...17,943,629
Ensembl chr 7:17,941,709...17,942,146
JBrowse link
G Ascl5 achaete-scute family bHLH transcription factor 5 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:47,491,900...47,493,346
Ensembl chr13:47,492,026...47,492,592
JBrowse link
G Atf1 activating transcription factor 1 located_in ISO (PMID:20102225)
(MGI:5613480|PMID:12871976)
RGD PMID:12871976 PMID:20102225 MGI:5613480 NCBI chr 7:131,361,962...131,404,677
Ensembl chr 7:131,362,450...131,404,670
JBrowse link
G Atf2 activating transcription factor 2 located_in ISO (PMID:20102225), (PMID:23661758), (PMID:28186491) RGD PMID:20102225 PMID:23661758 PMID:28186491 NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236
JBrowse link
G Atf3 activating transcription factor 3 located_in
part_of
ISO
IEA
(PMID:20102225), (PMID:23661758)
GO_REF:0000107
RGD
Ensembl
PMID:20102225 PMID:23661758 GO_REF:0000107 NCBI chr13:102,751,278...102,800,520
Ensembl chr13:102,751,321...102,764,631
JBrowse link
G Atf4 activating transcription factor 4 part_of
located_in
ISO (MGI:5812283|PMID:27812542)
(MGI:5613480|PMID:12871976)
(PMID:20102225), (PMID:23661758)
RGD PMID:12871976 PMID:20102225 PMID:23661758 PMID:27812542 MGI:5613480 MGI:5812283 NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446
JBrowse link
G Atf5 activating transcription factor 5 located_in
part_of
ISO
IEA
(PMID:20102225), (PMID:23661758)
GO_REF:0000107
RGD
Ensembl
PMID:20102225 PMID:23661758 GO_REF:0000107 NCBI chr 1:95,295,602...95,299,755
Ensembl chr 1:95,295,610...95,299,707
JBrowse link
G Atf6 activating transcription factor 6 located_in
part_of
ISO
IEA
(PMID:23661758)
GO_REF:0000107
RGD
Ensembl
PMID:23661758 GO_REF:0000107 NCBI chr13:82,927,579...83,106,381
Ensembl chr13:82,930,034...83,107,177
JBrowse link
G Atf6b activating transcription factor 6 beta part_of
located_in
ISO (PMID:11256944)
(PMID:23661758)
RGD PMID:11256944 PMID:23661758 NCBI chr20:4,090,921...4,098,920
Ensembl chr20:4,090,921...4,098,894
JBrowse link
G Atf7 activating transcription factor 7 located_in ISO (PMID:20102225) RGD PMID:20102225 NCBI chr 7:133,660,491...133,750,902
Ensembl chr 7:133,663,294...133,750,848
JBrowse link
G Bach1 BTB domain and CNC homolog 1 located_in
part_of
ISO
IEA
(PMID:20102225)
GO_REF:0000107
RGD
Ensembl
PMID:20102225 GO_REF:0000107 NCBI chr11:26,939,429...26,974,876
Ensembl chr11:26,939,480...26,972,447
JBrowse link
G Bach2 BTB domain and CNC homolog 2 located_in ISO (PMID:23661758) RGD PMID:23661758 NCBI chr 5:46,632,338...46,982,676
Ensembl chr 5:46,638,317...46,977,877
JBrowse link
G Batf basic leucine zipper ATF-like transcription factor located_in
part_of
ISO
IEA
(PMID:20102225), (PMID:23661758)
GO_REF:0000107
RGD
Ensembl
PMID:20102225 PMID:23661758 GO_REF:0000107 NCBI chr 6:105,353,715...105,376,051
Ensembl chr 6:105,353,715...105,376,051
JBrowse link
G Batf2 basic leucine zipper ATF-like transcription factor 2 located_in
part_of
ISO
IEA
(PMID:23661758)
GO_REF:0000107
RGD
Ensembl
PMID:23661758 GO_REF:0000107 NCBI chr 1:203,467,291...203,479,428
Ensembl chr 1:203,468,097...203,475,889
JBrowse link
G Batf3 basic leucine zipper ATF-like transcription factor 3 located_in
part_of
ISO
IEA
(PMID:20102225), (PMID:23661758)
GO_REF:0000107
RGD
Ensembl
PMID:20102225 PMID:23661758 GO_REF:0000107 NCBI chr13:102,689,657...102,701,241
Ensembl chr13:102,689,657...102,701,139
JBrowse link
G Carm1 coactivator-associated arginine methyltransferase 1 part_of ISO (MGI:5467164|PMID:22977234) RGD PMID:22977234 MGI:5467164 NCBI chr 8:20,097,262...20,141,950
Ensembl chr 8:20,097,254...20,147,689
JBrowse link
G Cbx3 chromobox 3 part_of ISO (PMID:29795351) RGD PMID:29795351 NCBI chr 4:80,545,450...80,559,284
Ensembl chr 4:80,546,010...80,559,283
JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha part_of
located_in
ISO (PMID:16946298)
(PMID:20102225), (PMID:23661758)
RGD PMID:16946298 PMID:20102225 PMID:23661758 NCBI chr 1:87,759,631...87,762,303
Ensembl chr 1:87,759,433...87,762,412
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta part_of
located_in
ISO (MGI:5812283|PMID:27812542)
(PMID:20102225)
RGD PMID:20102225 PMID:27812542 MGI:5812283 NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473
JBrowse link
G Cebpd CCAAT/enhancer binding protein delta located_in ISO (PMID:20102225) RGD PMID:20102225 NCBI chr11:84,764,670...84,765,808
Ensembl chr11:84,764,565...84,765,829
JBrowse link
G Cebpe CCAAT/enhancer binding protein epsilon located_in
part_of
ISO
IEA
(PMID:23661758), (PMID:28186491)
GO_REF:0000107
RGD
Ensembl
PMID:23661758 PMID:28186491 GO_REF:0000107 NCBI chr15:28,169,885...28,171,283
Ensembl chr15:28,169,704...28,171,814
JBrowse link
G Cebpg CCAAT/enhancer binding protein gamma located_in ISO (PMID:20102225), (PMID:23661758) RGD PMID:20102225 PMID:23661758 NCBI chr 1:87,683,060...87,692,772
Ensembl chr 1:87,684,019...87,694,569
JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 part_of ISO (PMID:29795351) RGD PMID:29795351 NCBI chr 4:157,898,503...157,931,632
Ensembl chr 4:157,899,391...157,931,541
JBrowse link
G Creb1 cAMP responsive element binding protein 1 located_in ISO (PMID:20102225)
(MGI:5613480|PMID:12871976)
RGD PMID:12871976 PMID:20102225 MGI:5613480 NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816
JBrowse link
G Creb3 cAMP responsive element binding protein 3 located_in
part_of
ISO
IEA
(PMID:20102225), (PMID:23661758)
GO_REF:0000107
RGD
Ensembl
PMID:20102225 PMID:23661758 GO_REF:0000107 NCBI chr 5:57,817,835...57,823,171
Ensembl chr 5:57,817,832...57,824,390
JBrowse link
G Crebbp CREB binding protein part_of ISO (MGI:5467164|PMID:22977234), (MGI:67494|PMID:7913207) RGD PMID:7913207 PMID:22977234 MGI:5467164 MGI:67494 NCBI chr10:11,335,551...11,461,888
Ensembl chr10:11,335,953...11,461,888
JBrowse link
G Crebzf CREB/ATF bZIP transcription factor located_in
part_of
ISO
IEA
(PMID:23661758)
GO_REF:0000107
RGD
Ensembl
PMID:23661758 GO_REF:0000107 NCBI chr 1:144,416,864...144,423,540
Ensembl chr 1:144,417,446...144,428,553
JBrowse link
G Ctnnb1 catenin beta 1 located_in ISO (MGI:6827205|PMID:21075118) RGD PMID:21075118 MGI:6827205 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Dbp D-box binding PAR bZIP transcription factor located_in ISO (PMID:23661758) RGD PMID:23661758 NCBI chr 1:96,175,796...96,180,745
Ensembl chr 1:96,175,440...96,180,745
JBrowse link
G Ddit3 DNA-damage inducible transcript 3 part_of
located_in
ISO UniProtKB:P01100|UniProtKB:P15066 (MGI:5616331|PMID:10523647)
(PMID:20102225), (PMID:23661758)
RGD PMID:10523647 PMID:20102225 PMID:23661758 MGI:5616331 NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201
JBrowse link
G Deaf1 DEAF1 transcription factor part_of ISO (MGI:1321453|PMID:9860983) RGD PMID:9860983 MGI:1321453 NCBI chr 1:196,401,857...196,435,541
Ensembl chr 1:196,401,857...196,435,541
JBrowse link
G Dr1 down-regulator of transcription 1 part_of ISO (PMID:8670811) RGD PMID:8670811 NCBI chr14:1,458,223...1,469,578
Ensembl chr14:1,458,223...1,469,638
JBrowse link
G Drap1 Dr1 associated protein 1 part_of ISO (PMID:8670811) RGD PMID:8670811 NCBI chr 1:202,731,775...202,734,468
Ensembl chr 1:202,731,788...202,734,425
JBrowse link
G E2f1 E2F transcription factor 1 part_of
located_in
IBA
ISO
PMID:21873635
(PMID:16360038)
RGD PMID:16360038 PMID:21873635 RGD:13792537 NCBI chr 3:143,064,535...143,075,362
Ensembl chr 3:143,049,478...143,075,361
JBrowse link
G E2f2 E2F transcription factor 2 part_of ISO
IBA
(PMID:7739537)
PMID:21873635
RGD PMID:7739537 PMID:21873635 RGD:13792537 NCBI chr 5:148,399,193...148,422,595
Ensembl chr 5:148,399,642...148,421,217
JBrowse link
G E2f3 E2F transcription factor 3 part_of IBA
ISO
PMID:21873635
(PMID:7739537)
RGD PMID:7739537 PMID:21873635 RGD:13792537 NCBI chr17:34,601,756...34,679,139
Ensembl chr17:34,601,830...34,676,253
JBrowse link
G E2f4 E2F transcription factor 4 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:33,174,396...33,181,806
Ensembl chr19:33,174,410...33,181,806
JBrowse link
G E2f5 E2F transcription factor 5 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:86,997,331...87,012,901
Ensembl chr 2:86,997,332...87,012,990
JBrowse link
G E2f6 E2F transcription factor 6 part_of ISO
IBA
(PMID:9501179)
PMID:21873635
RGD PMID:9501179 PMID:21873635 RGD:13792537 NCBI chr 6:39,592,224...39,608,685
Ensembl chr 6:39,592,228...39,608,683
JBrowse link
G E2f7 E2F transcription factor 7 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:46,150,533...46,192,739
Ensembl chr 7:46,151,293...46,192,734
JBrowse link
G E2f8 E2F transcription factor 8 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:98,565,717...98,584,265
Ensembl chr 1:98,565,717...98,584,098
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit located_in ISO (PMID:20102225), (PMID:23661758) RGD PMID:20102225 PMID:23661758 NCBI chr 6:105,121,170...105,124,036
Ensembl chr 6:105,121,170...105,124,036
JBrowse link
G Fosl1 FOS like 1, AP-1 transcription factor subunit located_in
part_of
ISO
IEA
(PMID:23661758), (PMID:28186491)
GO_REF:0000107
RGD
Ensembl
PMID:23661758 PMID:28186491 GO_REF:0000107 NCBI chr 1:202,754,549...202,763,057
Ensembl chr 1:202,754,529...202,764,930
JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit located_in ISO (PMID:20102225) RGD PMID:20102225 NCBI chr 6:24,297,898...24,319,157
Ensembl chr 6:24,300,956...24,320,034
JBrowse link
G Gata4 GATA binding protein 4 part_of ISO (PMID:9312027) RGD PMID:9312027 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636
JBrowse link
G Gtf2b general transcription factor IIB part_of ISO (PMID:1876184), (PMID:3029109), (PMID:7601352) RGD PMID:1876184 PMID:3029109 PMID:7601352 NCBI chr 2:231,767,317...231,785,626
Ensembl chr 2:231,767,238...231,785,651
JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 part_of ISO (PMID:11802795) RGD PMID:11802795 NCBI chr10:42,006,646...42,009,213
Ensembl chr10:42,006,651...42,009,213
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha part_of ISO
IEA
(PMID:7539918), (PMID:8756616)
GO_REF:0000107
RGD
Ensembl
PMID:7539918 PMID:8756616 GO_REF:0000107 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 part_of ISO (MGI:5306308|PMID:16407227) RGD PMID:16407227 MGI:5306308 NCBI chr 4:67,439,327...67,619,223
Ensembl chr 4:67,440,501...67,619,223
JBrowse link
G Hlf HLF transcription factor, PAR bZIP family member located_in ISO (PMID:23661758) RGD PMID:23661758 NCBI chr10:75,154,244...75,211,884
Ensembl chr10:75,154,507...75,211,935
JBrowse link
G Hltf helicase-like transcription factor located_in ISO (MGI:5469743|PMID:23415230) RGD PMID:23415230 MGI:5469743 NCBI chr 2:102,549,724...102,609,492
Ensembl chr 2:102,549,724...102,609,327
JBrowse link
G Hmga1 high mobility group AT-hook 1 part_of ISO (MGI:5644022|PMID:19389484) RGD PMID:19389484 MGI:5644022 NCBI chr20:5,611,088...5,618,755
Ensembl chr20:5,611,694...5,618,752
JBrowse link
G Hnrnpab heterogeneous nuclear ribonucleoprotein A/B part_of ISS
ISO
GO_REF:0000024
(MGI:3698386|PMID:17273560)
BHF-UCL
RGD
PMID:17273560 GO_REF:0000024 MGI:3698386 NCBI chr10:35,857,040...35,862,935
Ensembl chr10:35,857,041...35,863,344
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U colocalizes_with
part_of
ISO
IEA
(PMID:10490622)
GO_REF:0000107
RGD
Ensembl
PMID:10490622 GO_REF:0000107 NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588
JBrowse link
G Hoxb9 homeo box B9 part_of ISO (MGI:86817|PMID:9079637) RGD PMID:9079637 MGI:86817 NCBI chr10:81,237,312...81,240,818
Ensembl chr10:81,237,312...81,240,818
JBrowse link
G Hyal2 hyaluronidase 2 part_of IEA
ISO
GO_REF:0000107
(MGI:3851310|PMID:19366691)
Ensembl
RGD
PMID:19366691 GO_REF:0000107 MGI:3851310 NCBI chr 8:108,241,895...108,246,853
Ensembl chr 8:108,243,133...108,246,850
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit located_in ISO (PMID:20102225), (PMID:23661758) RGD PMID:20102225 PMID:23661758 NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656
JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit located_in ISO (PMID:20102225), (PMID:23661758) RGD PMID:20102225 PMID:23661758 NCBI chr19:23,176,265...23,178,049
Ensembl chr19:23,176,294...23,178,035
JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit located_in ISO (PMID:20102225) RGD PMID:20102225 NCBI chr16:18,734,121...18,735,799
Ensembl chr16:18,734,122...18,735,799
JBrowse link
G Ldb1 LIM domain binding 1 part_of ISO (MGI:1321453|PMID:9860983) RGD PMID:9860983 MGI:1321453 NCBI chr 1:244,864,168...244,890,007
Ensembl chr 1:244,877,173...244,890,013
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 located_in ISO (MGI:6827205|PMID:21075118) RGD PMID:21075118 MGI:6827205 NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
JBrowse link
G Lmo4 LIM domain only 4 part_of ISO (MGI:1321453|PMID:9860983), (MGI:3840011|PMID:19323994) RGD PMID:9860983 PMID:19323994 MGI:1321453 MGI:3840011 NCBI chr 2:233,264,180...233,280,881
Ensembl chr 2:233,264,182...233,280,880
JBrowse link
G Maf MAF bZIP transcription factor located_in
part_of
ISO
IEA
(PMID:23661758)
GO_REF:0000107
RGD
Ensembl
PMID:23661758 GO_REF:0000107 NCBI chr19:43,353,867...43,713,162
Ensembl chr19:43,360,342...43,712,365
JBrowse link
G Mafb MAF bZIP transcription factor B located_in
part_of
ISO
IEA
(PMID:23661758)
GO_REF:0000107
RGD
Ensembl
PMID:23661758 GO_REF:0000107 NCBI chr 3:148,998,111...149,000,031
Ensembl chr 3:148,998,122...149,000,031
JBrowse link
G Maff MAF bZIP transcription factor F located_in ISO (PMID:23661758) RGD PMID:23661758 NCBI chr 7:110,912,499...110,923,851
Ensembl chr 7:110,912,499...110,923,851
JBrowse link
G Mafg MAF bZIP transcription factor G located_in
part_of
ISO
IEA
(PMID:23661758)
GO_REF:0000107
RGD
Ensembl
PMID:23661758 GO_REF:0000107 NCBI chr10:105,903,307...105,911,845
Ensembl chr10:105,903,237...105,912,026
JBrowse link
G Max MYC associated factor X part_of IBA
ISO
PMID:21873635
(PMID:8425219), (PMID:8521822)
RGD PMID:8425219 PMID:8521822 PMID:21873635 RGD:13792537 NCBI chr 6:95,636,857...95,662,204
Ensembl chr 6:95,636,858...95,662,137
JBrowse link
G Mxd3 Max dimerization protein 3 part_of ISO
IEA
(MGI:77472|PMID:8521822)
GO_REF:0000107
RGD
Ensembl
PMID:8521822 GO_REF:0000107 MGI:77472 NCBI chr17:9,301,430...9,305,156
Ensembl chr17:9,301,399...9,305,157
JBrowse link
G Mxd4 Max dimerization protein 4 part_of ISO (MGI:77472|PMID:8521822) RGD PMID:8521822 MGI:77472 NCBI chr14:76,562,105...76,576,224
Ensembl chr14:76,561,774...76,576,221
JBrowse link
G Mxi1 MAX interactor 1, dimerization protein part_of ISO
IEA
(PMID:8425219)
GO_REF:0000107
RGD
Ensembl
PMID:8425219 GO_REF:0000107 NCBI chr 1:252,323,915...252,383,682
Ensembl chr 1:252,323,303...252,383,681
JBrowse link
G Ncoa1 nuclear receptor coactivator 1 located_in ISO (PMID:16373399) RGD PMID:16373399 NCBI chr 6:27,232,609...27,507,992
Ensembl chr 6:27,232,611...27,475,664
JBrowse link
G Ncoa3 nuclear receptor coactivator 3 part_of ISO (MGI:5467164|PMID:22977234) RGD PMID:22977234 MGI:5467164 NCBI chr 3:154,738,566...154,821,395
Ensembl chr 3:154,738,581...154,818,594
JBrowse link
G Neurod1 neuronal differentiation 1 part_of ISO (PMID:10545951) RGD PMID:10545951 NCBI chr 3:64,360,222...64,363,526
Ensembl chr 3:64,359,395...64,363,649
JBrowse link
G Nfe2 nuclear factor, erythroid 2 located_in ISO (PMID:20102225), (PMID:23661758) RGD PMID:20102225 PMID:23661758 NCBI chr 7:134,382,758...134,395,364
Ensembl chr 7:134,382,761...134,390,108
JBrowse link
G Nfe2l1 NFE2 like bZIP transcription factor 1 located_in ISO (PMID:20102225) RGD PMID:20102225 NCBI chr10:81,796,055...81,812,926
Ensembl chr10:81,800,366...81,832,318
JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 located_in
part_of
ISO
IEA
(PMID:23661758)
GO_REF:0000107
RGD
Ensembl
PMID:23661758 GO_REF:0000107 NCBI chr 3:60,594,239...60,621,785
Ensembl chr 3:60,594,242...60,621,737
JBrowse link
G Nfe2l3 NFE2 like bZIP transcription factor 3 located_in
part_of
ISO
IEA
(PMID:20102225)
GO_REF:0000107
RGD
Ensembl
PMID:20102225 GO_REF:0000107 NCBI chr 4:80,506,756...80,534,629
Ensembl chr 4:80,506,756...80,534,629
JBrowse link
G Nfil3 nuclear factor, interleukin 3 regulated located_in
part_of
ISO
IEA
(PMID:20102225), (PMID:23661758)
GO_REF:0000107
RGD
Ensembl
PMID:20102225 PMID:23661758 GO_REF:0000107 NCBI chr17:12,280,499...12,295,728
Ensembl chr17:12,280,484...12,295,858
JBrowse link
G Nfya nuclear transcription factor Y subunit alpha part_of ISO (PMID:11256944) RGD PMID:11256944 NCBI chr 9:12,587,437...12,613,911
Ensembl chr 9:12,586,259...12,613,898
JBrowse link
G Nfyb nuclear transcription factor Y subunit beta part_of ISO (PMID:11256944) RGD PMID:11256944 NCBI chr 7:20,964,988...20,980,569
Ensembl chr 7:20,964,993...20,980,565
JBrowse link
G Nfyc nuclear transcription factor Y subunit gamma part_of ISO (PMID:11256944) RGD PMID:11256944 NCBI chr 5:134,336,802...134,405,372
Ensembl chr 5:134,336,808...134,405,377
JBrowse link
G Nkx2-5 NK2 homeobox 5 part_of ISO
IEA
(PMID:9312027)
GO_REF:0000107
RGD
Ensembl
PMID:9312027 GO_REF:0000107 NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934
JBrowse link
G Nono non-POU domain containing, octamer-binding part_of ISO (MGI:5644022|PMID:19389484) RGD PMID:19389484 MGI:5644022 NCBI chr  X:66,554,131...66,571,992
Ensembl chr  X:66,554,098...66,571,952
JBrowse link
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 located_in
part_of
ISO
IEA
(PMID:27011007)
GO_REF:0000107
RGD
Ensembl
PMID:27011007 GO_REF:0000107 NCBI chr 1:95,041,967...95,047,377
Ensembl chr 1:95,041,967...95,047,377
JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 part_of
located_in
ISO
IEA
(PMID:18511497)
(PMID:25416956)
GO_REF:0000107
(MGI:4399016|PMID:17107947)
RGD
Ensembl
PMID:17107947 PMID:18511497 PMID:25416956 GO_REF:0000107 MGI:4399016 NCBI chr 3:77,158,808...77,168,907
Ensembl chr 3:77,158,808...77,168,722
JBrowse link
G Nr5a1 nuclear receptor subfamily 5, group A, member 1 part_of IBA
ISO
PMID:21873635
(MGI:5644022|PMID:19389484)
RGD PMID:19389484 PMID:21873635 MGI:5644022, RGD:13792537 NCBI chr 3:22,464,786...22,486,328
Ensembl chr 3:22,465,502...22,486,328
JBrowse link
G Nr5a2 nuclear receptor subfamily 5, group A, member 2 part_of IBA
ISO
PMID:21873635
(MGI:5644022|PMID:19389484)
RGD PMID:19389484 PMID:21873635 MGI:5644022, RGD:13792537 NCBI chr13:48,313,634...48,433,494
Ensembl chr13:48,316,301...48,433,326
JBrowse link
G Pbx1 PBX homeobox 1 part_of ISO (PMID:9079637) RGD PMID:9079637 NCBI chr13:80,278,766...80,588,563
Ensembl chr13:80,278,770...80,588,594
JBrowse link
G Pou2af1 POU class 2 homeobox associating factor 1 part_of ISO
IBA
(PMID:10329190), (PMID:11380252)
PMID:21873635
RGD PMID:10329190 PMID:11380252 PMID:21873635 RGD:13792537 NCBI chr 8:51,521,813...51,548,819
Ensembl chr 8:51,474,015...51,548,819
JBrowse link
G Pou2f1 POU class 2 homeobox 1 part_of ISO
IEA
(PMID:10329190), (PMID:11380252)
GO_REF:0000107
RGD
Ensembl
PMID:10329190 PMID:11380252 GO_REF:0000107 NCBI chr13:78,120,617...78,263,306
Ensembl chr13:78,130,685...78,263,363
JBrowse link
G Pou4f1 POU class 4 homeobox 1 part_of IEA
ISO
GO_REF:0000107
(MGI:6355477|PMID:10329733)
Ensembl
RGD
PMID:10329733 GO_REF:0000107 MGI:6355477 NCBI chr15:81,255,566...81,260,057
Ensembl chr15:81,257,781...81,259,728
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma part_of
located_in
ISO (PMID:9568716)
(PMID:16373399)
RGD PMID:9568716 PMID:16373399 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
JBrowse link
G Rab24 RAB24, member RAS oncogene family part_of IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr17:9,308,363...9,310,568
Ensembl chr17:9,308,525...9,310,553
JBrowse link
G Rara retinoic acid receptor, alpha located_in
part_of
ISO
IEA
(PMID:1310351)
GO_REF:0000107
RGD
Ensembl
PMID:1310351 GO_REF:0000107 NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142
JBrowse link
G Rfx5 regulatory factor X5 part_of ISO UniProtKB:O00287|UniProtKB:O14593 (PMID:9806546) RGD PMID:9806546 NCBI chr 2:182,521,131...182,528,720
Ensembl chr 2:182,521,202...182,528,717
JBrowse link
G Rfxank regulatory factor X-associated ankyrin-containing protein part_of ISO UniProtKB:O00287|UniProtKB:P48382 (PMID:9806546) RGD PMID:9806546 NCBI chr16:19,280,857...19,288,886
Ensembl chr16:19,281,475...19,460,255
JBrowse link
G Rfxap regulatory factor X-associated protein part_of ISO UniProtKB:O14593|UniProtKB:P48382 (PMID:9118943), (PMID:9806546) RGD PMID:9118943 PMID:9806546 NCBI chr 2:139,008,052...139,012,235
Ensembl chr 2:139,008,055...139,012,259
JBrowse link
G Rxra retinoid X receptor alpha part_of
located_in
ISO
IBA
(PMID:17426122), (PMID:18511497)
(MGI:6827315|PMID:8910441)
(MGI:4399016|PMID:17107947)
(PMID:10669605), (PMID:1310351), (PMID:22179700), (PMID:26289479)
PMID:21873635
RGD PMID:1310351 PMID:8910441 PMID:10669605 PMID:17107947 PMID:17426122 More... MGI:4399016 MGI:6827315, RGD:13792537 NCBI chr 3:10,989,832...11,076,366
Ensembl chr 3:10,989,832...11,073,712
JBrowse link
G Rxrb retinoid X receptor beta part_of
located_in
IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:25416956), (PMID:27011007)
Ensembl
RGD
PMID:25416956 PMID:27011007 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr20:4,816,813...4,823,267
Ensembl chr20:4,816,815...4,828,773
JBrowse link
G Rxrg retinoid X receptor gamma part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:79,743,430...79,785,173
Ensembl chr13:79,743,563...79,785,167
JBrowse link
G S100a10 S100 calcium binding protein A10 located_in ISO (MGI:5469743|PMID:23415230) RGD PMID:23415230 MGI:5469743 NCBI chr 2:179,221,012...179,229,659
Ensembl chr 2:179,220,887...179,229,661
JBrowse link
G Sfpq splicing factor proline and glutamine rich part_of ISO (MGI:5644022|PMID:19389484) RGD PMID:19389484 MGI:5644022 NCBI chr 5:139,338,034...139,353,476
Ensembl chr 5:139,338,075...139,353,472
JBrowse link
G Smad4 SMAD family member 4 part_of ISO (MGI:3851310|PMID:19366691) RGD PMID:19366691 MGI:3851310 NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
JBrowse link
G Stat1 signal transducer and activator of transcription 1 located_in ISO (PMID:8662591), (PMID:9630226) RGD PMID:8662591 PMID:9630226 NCBI chr 9:49,419,561...49,459,969
Ensembl chr 9:49,419,340...49,588,540
JBrowse link
G Stat3 signal transducer and activator of transcription 3 part_of
located_in
ISO (PMID:16946298)
(PMID:17676033), (PMID:8662591)
RGD PMID:8662591 PMID:16946298 PMID:17676033 NCBI chr10:85,811,206...85,863,057
Ensembl chr10:85,811,218...85,863,057
JBrowse link
G Stat4 signal transducer and activator of transcription 4 located_in ISO (PMID:18591661) RGD PMID:18591661 NCBI chr 9:49,472,660...49,588,540
Ensembl chr 9:49,419,340...49,588,540
JBrowse link
G Stat6 signal transducer and activator of transcription 6 located_in
part_of
ISO
IEA
(PMID:22000020)
GO_REF:0000107
RGD
Ensembl
PMID:22000020 GO_REF:0000107 NCBI chr 7:63,480,229...63,497,551
Ensembl chr 7:63,479,642...63,498,495
JBrowse link
G Tcf12 transcription factor 12 part_of ISO (PMID:11802795) RGD PMID:11802795 NCBI chr 8:72,490,447...72,799,265
Ensembl chr 8:72,492,567...72,799,201
JBrowse link
G Tcf15 transcription factor 15 part_of ISO (MGI:3818123|PMID:18361414) RGD PMID:18361414 MGI:3818123 NCBI chr 3:140,638,984...140,644,766
Ensembl chr 3:140,638,984...140,644,766
JBrowse link
G Tcf3 transcription factor 3 part_of ISO
IEA
(PMID:11802795)
GO_REF:0000107
(MGI:3818123|PMID:18361414)
(PMID:10545951)
RGD
Ensembl
PMID:10545951 PMID:11802795 PMID:18361414 GO_REF:0000107 MGI:3818123 NCBI chr 7:9,280,571...9,302,315
Ensembl chr 7:9,280,571...9,302,314
JBrowse link
G Tfdp1 transcription factor Dp-1 part_of
located_in
ISO (PMID:7739537)
(PMID:16360038)
RGD PMID:7739537 PMID:16360038 NCBI chr16:76,162,040...76,200,871
Ensembl chr16:76,162,043...76,200,817
JBrowse link
G Tfdp2 transcription factor Dp-2 part_of ISO (PMID:7739537), (PMID:9501179) RGD PMID:7739537 PMID:9501179 NCBI chr 8:96,760,459...96,901,466
Ensembl chr 8:96,760,504...96,896,682
JBrowse link
G Thra thyroid hormone receptor alpha located_in ISO (MGI:6827315|PMID:8910441) RGD PMID:8910441 MGI:6827315 NCBI chr10:83,701,885...83,729,408
Ensembl chr10:83,700,755...83,729,936
JBrowse link
G Thrb thyroid hormone receptor beta located_in
part_of
ISO
IEA
(PMID:26289479)
GO_REF:0000107
RGD
Ensembl
PMID:26289479 GO_REF:0000107 NCBI chr15:7,685,180...8,031,920
Ensembl chr15:7,685,180...7,882,916
JBrowse link
G Tp53 tumor protein p53 part_of IDA PMID:10329733 ARUK-UCL PMID:10329733 RGD:14697712 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Trim28 tripartite motif-containing 28 part_of IBA
ISO
ISS
PMID:21873635
(MGI:3698386|PMID:17273560)
GO_REF:0000024
RGD
BHF-UCL
PMID:17273560 PMID:21873635 GO_REF:0000024 MGI:3698386, RGD:13792537 NCBI chr 1:73,652,441...73,659,388
Ensembl chr 1:73,652,709...73,659,380
JBrowse link
G Vdr vitamin D receptor part_of
located_in
ISO
IEA
(PMID:17426122)
(PMID:22179700)
GO_REF:0000107
RGD
Ensembl
PMID:17426122 PMID:22179700 GO_REF:0000107 NCBI chr 7:128,987,981...129,037,677
Ensembl chr 7:128,987,981...129,037,677
JBrowse link
G Wwox WW domain-containing oxidoreductase part_of ISO (MGI:3851310|PMID:19366691) RGD PMID:19366691 MGI:3851310 NCBI chr19:42,432,141...43,360,278
Ensembl chr19:42,432,152...43,359,391
JBrowse link
G Xbp1 X-box binding protein 1 located_in
part_of
ISO
IEA
(PMID:23661758)
GO_REF:0000107
RGD
Ensembl
PMID:23661758 GO_REF:0000107 NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
JBrowse link
activating signal cointegrator 1 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascc2 activating signal cointegrator 1 complex subunit 2 part_of ISO (PMID:12077347) RGD PMID:12077347 NCBI chr14:79,503,449...79,547,801
Ensembl chr14:79,503,517...79,545,494
JBrowse link
G Ascc3 activating signal cointegrator 1 complex subunit 3 part_of ISO (PMID:12077347) RGD PMID:12077347 NCBI chr20:53,510,137...53,795,446
Ensembl chr20:53,510,184...53,790,165
JBrowse link
G Trip4 thyroid hormone receptor interactor 4 part_of ISO (PMID:12077347) RGD PMID:12077347 NCBI chr 8:66,351,861...66,439,679
Ensembl chr 8:66,353,248...66,439,774
JBrowse link
activin responsive factor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxh1 forkhead box H1 part_of IBA
ISO
PMID:21873635
(MGI:1321467|PMID:9858566), (MGI:1328655|PMID:10349617)
(PMID:9389648)
RGD PMID:9389648 PMID:9858566 PMID:10349617 PMID:21873635 MGI:1321467 MGI:1328655, RGD:13792537 NCBI chr 7:108,387,969...108,391,566
Ensembl chr 7:108,387,969...108,390,049
JBrowse link
G Smad2 SMAD family member 2 part_of ISO (PMID:9389648) RGD PMID:9389648 NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323
JBrowse link
G Smad4 SMAD family member 4 part_of ISO
IEA
(PMID:9389648)
GO_REF:0000107
RGD
Ensembl
PMID:9389648 GO_REF:0000107 NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
JBrowse link
ATF1-ATF4 transcription factor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf1 activating transcription factor 1 part_of ISO (PMID:12871976)
(MGI:5613480|PMID:12871976)
RGD PMID:12871976 MGI:5613480 NCBI chr 7:131,361,962...131,404,677
Ensembl chr 7:131,362,450...131,404,670
JBrowse link
G Atf4 activating transcription factor 4 part_of IBA
ISO
PMID:21873635
(MGI:5613480|PMID:12871976)
(PMID:12871976)
RGD PMID:12871976 PMID:21873635 MGI:5613480, RGD:13792537 NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446
JBrowse link
ATF4-CREB1 transcription factor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf1 activating transcription factor 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:131,361,962...131,404,677
Ensembl chr 7:131,362,450...131,404,670
JBrowse link
G Atf4 activating transcription factor 4 part_of ISO
IBA
(PMID:12871976)
(MGI:5613480|PMID:12871976)
PMID:21873635
RGD PMID:12871976 PMID:21873635 MGI:5613480, RGD:13792537 NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446
JBrowse link
G Creb1 cAMP responsive element binding protein 1 part_of ISO
IBA
(PMID:12871976)
(MGI:5613480|PMID:12871976)
PMID:21873635
RGD PMID:12871976 PMID:21873635 MGI:5613480, RGD:13792537 NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816
JBrowse link
G Crem cAMP responsive element modulator part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:54,238,889...54,305,989
Ensembl chr17:54,239,030...54,305,989
JBrowse link
beta-catenin-TCF complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl9 BCL9, transcription coactivator part_of IBA
ISO
PMID:21873635
UniProtKB:P15884|UniProtKB:P35222 (PMID:11955446), (PMID:28296634)
RGD PMID:11955446 PMID:28296634 PMID:21873635 RGD:13792537 NCBI chr 2:184,760,616...184,846,261
Ensembl chr 2:184,760,618...184,786,435
JBrowse link
G Bcl9l BCL9 like part_of IBA
ISO
PMID:21873635
(PMID:28296634)
RGD PMID:28296634 PMID:21873635 RGD:13792537 NCBI chr 8:44,811,977...44,840,611
Ensembl chr 8:44,811,977...44,840,611
JBrowse link
G Ctnnb1 catenin beta 1 part_of
located_in
ISO
IEA
UniProtKB:O00512|UniProtKB:P15884|UniProtKB:Q9UJU2 (PMID:11955446), (PMID:18936100), (PMID:28296634)
GO_REF:0000107
(PMID:20123964)
(MGI:1196720|PMID:9488439), (MGI:4836133|PMID:20371816)
RGD
Ensembl
PMID:9488439 PMID:11955446 PMID:18936100 PMID:20123964 PMID:20371816 More... GO_REF:0000107 MGI:1196720 MGI:4836133 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Ldb1 LIM domain binding 1 part_of ISO (PMID:28296634) RGD PMID:28296634 NCBI chr 1:244,864,168...244,890,007
Ensembl chr 1:244,877,173...244,890,013
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 part_of
located_in
ISO
IBA
UniProtKB:P35222 (PMID:18936100)
(PMID:20123964)
(MGI:4836133|PMID:20371816)
PMID:21873635
RGD PMID:18936100 PMID:20123964 PMID:20371816 PMID:21873635 MGI:4836133, RGD:13792537 NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
JBrowse link
G Pygo2 pygopus family PHD finger 2 part_of ISO (PMID:28296634) RGD PMID:28296634 NCBI chr 2:174,849,670...174,854,758
Ensembl chr 2:174,849,936...174,854,758
JBrowse link
G Tcf4 transcription factor 4 part_of ISO UniProtKB:O00512|UniProtKB:P35222 (PMID:11955446) RGD PMID:11955446 NCBI chr18:62,941,739...63,288,126
Ensembl chr18:62,943,782...63,284,425
JBrowse link
G Tcf7 transcription factor 7 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:36,423,443...36,454,350
Ensembl chr10:36,423,445...36,453,535
JBrowse link
G Tcf7l1 transcription factor 7 like 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:104,680,734...104,846,086
Ensembl chr 4:104,680,739...104,845,287
JBrowse link
G Tcf7l2 transcription factor 7 like 2 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967
JBrowse link
G Tle1 TLE family member 1, transcriptional corepressor part_of ISO (PMID:28296634) RGD PMID:28296634 NCBI chr 5:85,851,827...85,934,806
Ensembl chr 5:85,851,827...85,934,774
JBrowse link
G Tle3 TLE family member 3, transcriptional corepressor part_of ISO (PMID:28296634) RGD PMID:28296634 NCBI chr 8:61,857,791...61,903,505
Ensembl chr 8:61,858,200...61,903,493
JBrowse link
G Tle4 TLE family member 4, transcriptional corepressor part_of ISO (PMID:28296634) RGD PMID:28296634 NCBI chr 1:211,661,738...211,798,458
Ensembl chr 1:211,661,746...211,797,862
JBrowse link
beta-catenin-TCF7L2 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 part_of ISO
ISS
(PMID:12651860), (PMID:9065401), (PMID:9065402)
GO_REF:0000024
RGD
UniProt
PMID:9065401 PMID:9065402 PMID:12651860 GO_REF:0000024 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Tcf4 transcription factor 4 part_of ISO (PMID:12651860) RGD PMID:12651860 NCBI chr18:62,941,739...63,288,126
Ensembl chr18:62,943,782...63,284,425
JBrowse link
G Tcf7l2 transcription factor 7 like 2 part_of ISO (PMID:9065401), (PMID:9065402) RGD PMID:9065401 PMID:9065402 NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967
JBrowse link
C/EBP complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cebpa CCAAT/enhancer binding protein alpha located_in ISO (PMID:20102225) RGD PMID:20102225 NCBI chr 1:87,759,631...87,762,303
Ensembl chr 1:87,759,433...87,762,412
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta located_in ISO (PMID:20102225)
(MGI:6827204|PMID:17264204)
RGD PMID:17264204 PMID:20102225 MGI:6827204 NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473
JBrowse link
CCAAT-binding factor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 part_of IDA PMID:8703044 MGI PMID:8703044 RGD:150521642 NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236
JBrowse link
G Cebpz CCAAT/enhancer binding protein zeta part_of IDA PMID:8703044 MGI PMID:8703044 RGD:150521642 NCBI chr 6:16,119,871...16,137,600
Ensembl chr 6:16,119,872...16,137,600
JBrowse link
G Ing2 inhibitor of growth family, member 2 part_of ISO (PMID:15243141) RGD PMID:15243141 NCBI chr16:44,573,592...44,584,180
Ensembl chr16:44,575,597...44,583,482
JBrowse link
G Nfya nuclear transcription factor Y subunit alpha part_of
located_in
IDA
IEA
ISO
IBA
GO_REF:0000002
(PMID:23332751)
PMID:21873635
(PMID:15243141)
InterPro
RGD
PMID:15243141 PMID:23332751 PMID:7878029 PMID:21873635 GO_REF:0000002, RGD:729287, RGD:13792537 NCBI chr 9:12,587,437...12,613,911
Ensembl chr 9:12,586,259...12,613,898
JBrowse link
G Nfyb nuclear transcription factor Y subunit beta part_of
located_in
IDA
IEA
ISO
IBA
GO_REF:0000107
(PMID:23332751)
PMID:21873635
(PMID:15243141)
Ensembl
RGD
PMID:15243141 PMID:23332751 PMID:7878029 PMID:21873635 GO_REF:0000107, RGD:729287, RGD:13792537 NCBI chr 7:20,964,988...20,980,569
Ensembl chr 7:20,964,993...20,980,565
JBrowse link
G Nfyc nuclear transcription factor Y subunit gamma located_in
part_of
IDA
ISO
IBA
(PMID:23332751)
PMID:21873635
(PMID:15243141)
RGD PMID:15243141 PMID:23332751 PMID:7878029 PMID:21873635 RGD:729287, RGD:13792537 NCBI chr 5:134,336,802...134,405,372
Ensembl chr 5:134,336,808...134,405,377
JBrowse link
CHOP-ATF4 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf4 activating transcription factor 4 part_of ISO UniProtKB:P35638 (PMID:11478948), (PMID:18940792) RGD PMID:11478948 PMID:18940792 NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446
JBrowse link
G Ddit3 DNA-damage inducible transcript 3 part_of IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
UniProtKB:P18848 (PMID:11478948), (PMID:18940792)
Ensembl
RGD
PMID:11478948 PMID:18940792 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201
JBrowse link
CHOP-C/EBP complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cebpa CCAAT/enhancer binding protein alpha part_of
located_in
IPI
ISO
PMID:8657121
(PMID:20102225)
RGD PMID:20102225 PMID:8657121 PMID:8657121 RGD:1599740, RGD:1599740 NCBI chr 1:87,759,631...87,762,303
Ensembl chr 1:87,759,433...87,762,412
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta part_of
located_in
IPI
ISO
PMID:1547942
PMID:8657121
(PMID:20102225)
RGD PMID:20102225 PMID:1547942 PMID:8657121 RGD:10047202, RGD:1599740 NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473
JBrowse link
G Ddit3 DNA-damage inducible transcript 3 part_of
located_in
IPI
IEA
ISO
IBA
PMID:8657121
GO_REF:0000107
(PMID:20102225)
UniProtKB:P21272 (MGI:85669|PMID:1547942)
PMID:21873635
Ensembl
RGD
PMID:1547942 PMID:20102225 PMID:8657121 PMID:8657121 PMID:21873635 GO_REF:0000107 MGI:85669, RGD:1599740, RGD:1599740, RGD:13792537 NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201
JBrowse link
CLOCK-BMAL transcription complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arntl aryl hydrocarbon receptor nuclear translocator-like located_in ISO (PMID:23229515)
(MGI:5442460|PMID:22653727)
RGD PMID:22653727 PMID:23229515 MGI:5442460 NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231
JBrowse link
G Arntl2 aryl hydrocarbon receptor nuclear translocator-like 2 located_in
part_of
ISO
IEA
(PMID:10864977)
GO_REF:0000107
(MGI:5918767|PMID:25961797)
RGD
Ensembl
PMID:10864977 PMID:25961797 GO_REF:0000107 MGI:5918767 NCBI chr 4:179,699,432...179,747,710
Ensembl chr 4:179,699,502...179,746,949
JBrowse link
G Clock clock circadian regulator located_in
part_of
ISO
IBA
IEA
(PMID:10864977), (PMID:23229515)
PMID:21873635
GO_REF:0000107
(MGI:5442460|PMID:22653727), (MGI:5918767|PMID:25961797)
RGD
Ensembl
PMID:10864977 PMID:22653727 PMID:23229515 PMID:25961797 PMID:21873635 GO_REF:0000107 MGI:5442460 MGI:5918767, RGD:13792537 NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400
JBrowse link
G Npas2 neuronal PAS domain protein 2 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:41,463,361...41,642,322
Ensembl chr 9:41,463,830...41,642,320
JBrowse link
core mediator complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Med1 mediator complex subunit 1 located_in ISO (PMID:24882805) RGD PMID:24882805 NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299
JBrowse link
G Med10 mediator complex subunit 10 located_in
part_of
ISO
IEA
(PMID:24882805)
GO_REF:0000107
RGD
Ensembl
PMID:24882805 GO_REF:0000107 NCBI chr 1:33,470,064...33,481,698
Ensembl chr 1:33,470,066...33,475,767
JBrowse link
G Med11 mediator complex subunit 11 located_in
part_of
ISO
IEA
(PMID:24882805)
GO_REF:0000107
RGD
Ensembl
PMID:24882805 GO_REF:0000107 NCBI chr10:55,164,304...55,166,134
Ensembl chr10:55,164,326...55,166,533
JBrowse link
G Med14 mediator complex subunit 14 part_of
located_in
IBA
ISO
PMID:21873635
(PMID:24882805)
RGD PMID:24882805 PMID:21873635 RGD:13792537 NCBI chr  X:10,036,749...10,127,910
Ensembl chr  X:10,036,805...10,126,240
JBrowse link
G Med15 mediator complex subunit 15 located_in ISO (PMID:24882805) RGD PMID:24882805 NCBI chr11:83,280,722...83,356,006
Ensembl chr11:83,280,762...83,355,362
JBrowse link
G Med16 mediator complex subunit 16 located_in
part_of
ISO
IEA
(PMID:24882805)
GO_REF:0000107
RGD
Ensembl
PMID:24882805 GO_REF:0000107 NCBI chr 7:9,798,641...9,811,172
Ensembl chr 7:9,798,668...9,811,172
JBrowse link
G Med17 mediator complex subunit 17 part_of
located_in
IBA
ISO
PMID:21873635
(PMID:24882805)
RGD PMID:24882805 PMID:21873635 RGD:13792537 NCBI chr 8:12,101,594...12,120,592
Ensembl chr 8:12,101,594...12,120,592
JBrowse link
G Med18 mediator complex subunit 18 part_of
located_in
IBA
ISO
PMID:21873635
(PMID:24882805)
RGD PMID:24882805 PMID:21873635 RGD:13792537 NCBI chr 5:144,663,316...144,668,652
Ensembl chr 5:144,663,252...144,668,635
JBrowse link
G Med19 mediator complex subunit 19 located_in ISO (PMID:24882805) RGD PMID:24882805 NCBI chr 3:69,762,138...69,772,661
Ensembl chr 3:69,762,166...69,772,036
JBrowse link
G Med20 mediator complex subunit 20 located_in ISO (PMID:24882805) RGD PMID:24882805 NCBI chr 9:13,370,146...13,382,756
Ensembl chr 9:13,370,146...13,382,476
JBrowse link
G Med21 mediator complex subunit 21 located_in ISO (PMID:24882805) RGD PMID:24882805 NCBI chr 4:179,560,509...179,583,811
Ensembl chr 4:179,560,579...179,567,548
JBrowse link
G Med22 mediator complex subunit 22 located_in
part_of
ISO
IEA
(PMID:24882805)
GO_REF:0000107
RGD
Ensembl
PMID:24882805 GO_REF:0000107 NCBI chr 3:10,233,754...10,238,836
Ensembl chr 3:10,233,754...10,238,836
JBrowse link
G Med23 mediator complex subunit 23 located_in ISO (PMID:24882805) RGD PMID:24882805 NCBI chr 1:20,490,315...20,558,461
Ensembl chr 1:20,490,315...20,537,463
JBrowse link
G Med24 mediator complex subunit 24 located_in
part_of
ISO
IEA
(PMID:24882805)
GO_REF:0000107
RGD
Ensembl
PMID:24882805 GO_REF:0000107 NCBI chr10:83,664,609...83,702,315
Ensembl chr10:83,664,609...83,690,123
JBrowse link
G Med25 mediator complex subunit 25 located_in ISO (PMID:24882805) RGD PMID:24882805 NCBI chr 1:95,359,961...95,375,827
Ensembl chr 1:95,360,284...95,375,877
JBrowse link
G Med26 mediator complex subunit 26 part_of
located_in
IBA
ISO
PMID:21873635
(PMID:24882805)
RGD PMID:24882805 PMID:21873635 RGD:13792537 NCBI chr16:17,299,722...17,350,168
Ensembl chr16:17,299,722...17,349,543
JBrowse link
G Med27 mediator complex subunit 27 located_in
part_of
ISO
IEA
(PMID:24882805)
GO_REF:0000107
RGD
Ensembl
PMID:24882805 GO_REF:0000107 NCBI chr 3:12,629,593...12,803,340
Ensembl chr 3:12,629,603...12,803,339
JBrowse link
G Med28 mediator complex subunit 28 located_in
part_of
ISO
IEA
(PMID:24882805)
GO_REF:0000107
RGD
Ensembl
PMID:24882805 GO_REF:0000107 NCBI chr14:65,594,785...65,603,583
Ensembl chr14:65,594,647...65,603,583
JBrowse link
G Med29 mediator complex subunit 29 located_in
part_of
ISO
IEA
(PMID:24882805)
GO_REF:0000107
RGD
Ensembl
PMID:24882805 GO_REF:0000107 NCBI chr 1:83,677,961...83,683,365
Ensembl chr 1:83,677,961...83,683,365
JBrowse link
G Med30 mediator complex subunit 30 located_in
part_of
ISO
IEA
(PMID:24882805)
GO_REF:0000107
RGD
Ensembl
PMID:24882805 GO_REF:0000107 NCBI chr 7:84,004,710...84,028,064
Ensembl chr 7:84,004,722...84,026,595
JBrowse link
G Med31 mediator complex subunit 31 part_of
located_in
IBA
ISO
PMID:21873635
(PMID:24882805)
RGD PMID:24882805 PMID:21873635 RGD:13792537 NCBI chr10:56,836,944...56,840,326
Ensembl chr10:56,836,944...56,840,326
JBrowse link
G Med4 mediator complex subunit 4 part_of
located_in
IBA
ISO
PMID:21873635
(PMID:24882805)
RGD PMID:24882805 PMID:21873635 RGD:13792537 NCBI chr15:48,696,542...48,706,818
Ensembl chr15:48,696,511...48,706,820
JBrowse link
G Med6 mediator complex subunit 6 part_of
located_in
IBA
ISO
PMID:21873635
(PMID:24882805)
RGD PMID:24882805 PMID:21873635 RGD:13792537 NCBI chr 6:101,270,410...101,283,929
Ensembl chr 6:101,270,410...101,283,876
JBrowse link
G Med7 mediator complex subunit 7 located_in
part_of
ISO
IEA
(PMID:24882805)
GO_REF:0000107
RGD
Ensembl
PMID:24882805 GO_REF:0000107 NCBI chr10:30,842,330...30,857,873
Ensembl chr10:30,842,292...30,859,220
JBrowse link
G Med8 mediator complex subunit 8 located_in ISO (PMID:24882805) RGD PMID:24882805 NCBI chr 5:131,948,632...131,949,516
Ensembl chr 5:131,943,982...131,950,305
JBrowse link
G Med9 mediator complex subunit 9 located_in
part_of
ISO
IEA
(PMID:24882805)
GO_REF:0000107
RGD
Ensembl
PMID:24882805 GO_REF:0000107 NCBI chr10:44,750,667...44,765,464
Ensembl chr10:44,750,698...44,765,464
JBrowse link
core TFIIH complex portion of holo TFIIH complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gtf2h2 general transcription factor IIH subunit 2 part_of ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 2:31,623,752...31,652,697
Ensembl chr 2:31,624,678...31,652,592
JBrowse link
G Gtf2h3 general transcription factor IIH subunit 3 part_of ISO
ISS
(PMID:27193682)
GO_REF:0000024
RGD
UniProt
PMID:27193682 GO_REF:0000024 NCBI chr12:32,009,010...32,025,484
Ensembl chr12:32,009,014...32,025,497
JBrowse link
G Gtf2h4 general transcription factor 2H subunit 4 part_of ISO (PMID:27193682) RGD PMID:27193682 NCBI chr20:3,071,328...3,076,990
Ensembl chr20:3,071,328...3,076,984
JBrowse link
core-binding factor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbfb core-binding factor subunit beta part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:33,049,162...33,092,752
Ensembl chr19:33,049,172...33,092,751
JBrowse link
G Runx1 RUNX family transcription factor 1 part_of TAS PMID:18258917 UniProt PMID:18258917 RGD:13524617 NCBI chr11:31,839,880...32,074,427
Ensembl chr11:31,843,764...32,074,542
JBrowse link
heteromeric SMAD protein complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smad1 SMAD family member 1 part_of
located_in
IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:11779505)
Ensembl
RGD
PMID:11779505 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr19:28,513,130...28,573,665
Ensembl chr19:28,513,131...28,573,651
JBrowse link
G Smad2 SMAD family member 2 part_of
located_in
ISO
IBA
(PMID:21828274)
(PMID:15350224)
PMID:21873635
RGD PMID:15350224 PMID:21828274 PMID:21873635 RGD:13792537 NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323
JBrowse link
G Smad3 SMAD family member 3 part_of
located_in
IBA
ISO
PMID:21873635
(PMID:15350224)
(PMID:21828274)
RGD PMID:15350224 PMID:21828274 PMID:21873635 RGD:13792537 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
JBrowse link
G Smad4 SMAD family member 4 part_of
located_in
IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:11779505), (PMID:15350224)
Ensembl
RGD
PMID:11779505 PMID:15350224 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
JBrowse link
G Smad5 SMAD family member 5 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:7,862,332...7,891,678
Ensembl chr17:7,864,720...7,891,634
JBrowse link
G Smad6 SMAD family member 6 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:64,450,114...64,519,673
Ensembl chr 8:64,450,114...64,519,763
JBrowse link
G Smad7 SMAD family member 7 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:68,988,429...69,016,774
Ensembl chr18:68,988,429...69,016,765
JBrowse link
G Smad9 SMAD family member 9 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:138,956,326...139,006,315
Ensembl chr 2:138,986,471...139,006,307
JBrowse link
ISGF3 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irf9 interferon regulatory factor 9 located_in ISO (PMID:24065129) RGD PMID:24065129 NCBI chr15:29,095,474...29,101,924
Ensembl chr15:29,095,789...29,101,236
JBrowse link
G Stat1 signal transducer and activator of transcription 1 located_in ISO (PMID:24065129) RGD PMID:24065129 NCBI chr 9:49,419,561...49,459,969
Ensembl chr 9:49,419,340...49,588,540
JBrowse link
G Stat2 signal transducer and activator of transcription 2 located_in
part_of
ISO
IEA
(PMID:24065129)
GO_REF:0000107
RGD
Ensembl
PMID:24065129 GO_REF:0000107 NCBI chr 7:702,565...718,349
Ensembl chr 7:702,495...718,967
JBrowse link
Myc-Max complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Max MYC associated factor X located_in
part_of
ISO
IEA
(PMID:12553908)
GO_REF:0000107
(MGI:4839428|PMID:20434984)
RGD
Ensembl
PMID:12553908 PMID:20434984 GO_REF:0000107 MGI:4839428 NCBI chr 6:95,636,857...95,662,204
Ensembl chr 6:95,636,858...95,662,137
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor located_in
part_of
ISO
IEA
(PMID:12553908)
GO_REF:0000107
(MGI:4839428|PMID:20434984)
RGD
Ensembl
PMID:12553908 PMID:20434984 GO_REF:0000107 MGI:4839428 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
Rb-E2F complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cebpa CCAAT/enhancer binding protein alpha IDA RGD PMID:16172914 RGD:1625368 NCBI chr 1:87,759,631...87,762,303
Ensembl chr 1:87,759,433...87,762,412
JBrowse link
G E2f1 E2F transcription factor 1 part_of
located_in
ISO (PMID:20224733)
(PMID:16360038)
RGD PMID:16360038 PMID:20224733 NCBI chr 3:143,064,535...143,075,362
Ensembl chr 3:143,049,478...143,075,361
JBrowse link
G Rb1 RB transcriptional corepressor 1 part_of
located_in
IBA
ISO
IEA
ISS
PMID:21873635
(PMID:16360038)
(MGI:5285162|PMID:20224733), (MGI:6368297|PMID:8336704)
GO_REF:0000107
GO_REF:0000024
(PMID:8245034)
RGD
Ensembl
UniProt
PMID:8245034 PMID:8336704 PMID:16360038 PMID:20224733 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:5285162 MGI:6368297, RGD:13792537 NCBI chr15:48,371,295...48,502,473
Ensembl chr15:48,371,296...48,502,302
JBrowse link
G Tfdp1 transcription factor Dp-1 located_in
part_of
ISO
IEA
(PMID:16360038)
GO_REF:0000107
RGD
Ensembl
PMID:16360038 GO_REF:0000107 NCBI chr16:76,162,040...76,200,871
Ensembl chr16:76,162,043...76,200,817
JBrowse link
SMN-Gemin2 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gemin5 gem (nuclear organelle) associated protein 5 part_of ISO (PMID:19377484) RGD PMID:19377484 NCBI chr10:42,295,729...42,342,902
Ensembl chr10:42,297,515...42,342,892
JBrowse link
TEAD-YAP complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tead1 TEA domain transcription factor 1 part_of
located_in
ISO (PMID:20123905)
(MGI:6827312|PMID:11358867)
(PMID:25384421)
RGD PMID:11358867 PMID:20123905 PMID:25384421 MGI:6827312 NCBI chr 1:166,791,900...167,010,591
Ensembl chr 1:166,792,628...167,003,369
JBrowse link
G Tead2 TEA domain transcription factor 2 part_of ISO (PMID:20368466) RGD PMID:20368466 NCBI chr 1:95,702,366...95,719,186
Ensembl chr 1:95,703,005...95,719,186
JBrowse link
G Yap1 Yes1 associated transcriptional regulator part_of
located_in
ISO (PMID:20123905), (PMID:20368466)
(MGI:6827312|PMID:11358867)
(PMID:25384421)
RGD PMID:11358867 PMID:20123905 PMID:20368466 PMID:25384421 MGI:6827312 NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
JBrowse link
transcription factor AP-1 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fos Fos proto-oncogene, AP-1 transcription factor subunit part_of
located_in
ISO (PMID:10508860), (PMID:26514923)
(MGI:80762|PMID:1631061)
(PMID:7816143), (PMID:9510247)
RGD PMID:1631061 PMID:7816143 PMID:9510247 PMID:10508860 PMID:26514923 MGI:80762 NCBI chr 6:105,121,170...105,124,036
Ensembl chr 6:105,121,170...105,124,036
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit part_of
located_in
ISO (PMID:10508860), (PMID:26514923)
(MGI:80762|PMID:1631061)
(PMID:7816143), (PMID:8662824), (PMID:9510247)
RGD PMID:1631061 PMID:7816143 PMID:8662824 PMID:9510247 PMID:10508860 More... MGI:80762 NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656
JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit part_of ISO (PMID:10508860) RGD PMID:10508860 NCBI chr19:23,176,265...23,178,049
Ensembl chr19:23,176,294...23,178,035
JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit part_of ISO (PMID:10508860) RGD PMID:10508860 NCBI chr16:18,734,121...18,735,799
Ensembl chr16:18,734,122...18,735,799
JBrowse link
G Nfatc2 nuclear factor of activated T-cells 2 located_in
part_of
ISO
IEA
(PMID:9510247)
GO_REF:0000107
RGD
Ensembl
PMID:9510247 GO_REF:0000107 NCBI chr 3:157,195,970...157,328,640
Ensembl chr 3:157,198,872...157,328,325
JBrowse link
transcription factor TFIIA complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gtf2a1 general transcription factor 2A subunit 1 part_of
located_in
ISO
IBA
(PMID:7724559)
(PMID:8626665)
(MGI:3583836|PMID:15927180)
PMID:21873635
RGD PMID:7724559 PMID:8626665 PMID:15927180 PMID:21873635 MGI:3583836, RGD:13792537 NCBI chr 6:110,488,891...110,521,059
Ensembl chr 6:110,488,931...110,521,511
JBrowse link
G Gtf2a1l general transcription factor 2A subunit 1 like part_of IBA
ISO
PMID:21873635
(MGI:3583836|PMID:15927180)
RGD PMID:15927180 PMID:21873635 MGI:3583836, RGD:13792537 NCBI chr 6:5,752,814...5,834,797
Ensembl chr 6:5,752,823...5,836,472
JBrowse link
G Gtf2a2 general transcription factor 2A subunit 2 part_of
located_in
ISO
IEA
IBA
(PMID:7724559), (PMID:7958899), (PMID:7958900)
(PMID:8626665)
GO_REF:0000002
PMID:21873635
RGD
InterPro
PMID:7724559 PMID:7958899 PMID:7958900 PMID:8626665 PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 8:70,662,395...70,675,576
Ensembl chr 8:70,662,428...70,675,569
JBrowse link
G LOC103695118 transcription initiation factor IIA subunit 2 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002
G Tbp TATA box binding protein part_of ISO (PMID:7724559) RGD PMID:7724559 NCBI chr 1:56,463,330...56,480,430
Ensembl chr 1:56,463,618...56,510,016
JBrowse link
G Tbpl1 TATA-box binding protein like 1 part_of ISO (MGI:3583836|PMID:15927180) RGD PMID:15927180 MGI:3583836 NCBI chr 1:22,777,892...22,803,305
Ensembl chr 1:22,778,459...22,803,122
Ensembl chr 1:22,778,459...22,803,122
JBrowse link
transcription factor TFIID complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit part_of ISO (PMID:27193682) RGD PMID:27193682 NCBI chr 1:79,033,342...79,047,102
Ensembl chr 1:79,033,326...79,047,102
JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit part_of ISO (PMID:27193682) RGD PMID:27193682 NCBI chr18:23,883,613...23,914,326
Ensembl chr18:23,883,580...23,914,329
JBrowse link
G Gtf2a1 general transcription factor 2A subunit 1 part_of ISO (PMID:27193682) RGD PMID:27193682 NCBI chr 6:110,488,891...110,521,059
Ensembl chr 6:110,488,931...110,521,511
JBrowse link
G Gtf2a2 general transcription factor 2A subunit 2 part_of ISO (PMID:27193682) RGD PMID:27193682 NCBI chr 8:70,662,395...70,675,576
Ensembl chr 8:70,662,428...70,675,569
JBrowse link
G Gtf2b general transcription factor IIB part_of ISO
IEA
(PMID:27193682)
GO_REF:0000107
RGD
Ensembl
PMID:27193682 GO_REF:0000107 NCBI chr 2:231,767,317...231,785,626
Ensembl chr 2:231,767,238...231,785,651
JBrowse link
G Gtf2e1 general transcription factor IIE subunit 1 part_of ISO (PMID:27193682) RGD PMID:27193682 NCBI chr11:63,182,073...63,215,349
Ensembl chr11:63,182,349...63,213,942
JBrowse link
G Gtf2e2 general transcription factor IIE subunit 2 part_of ISO (PMID:27193682) RGD PMID:27193682 NCBI chr16:58,399,307...58,449,467
Ensembl chr16:58,399,107...58,449,371
JBrowse link
G Gtf2f1 general transcription factor IIF subunit 1 part_of ISO (PMID:27193682) RGD PMID:27193682 NCBI chr 9:1,844,027...1,853,455
Ensembl chr 9:1,843,901...1,853,423
JBrowse link
G Gtf2h3 general transcription factor IIH subunit 3 part_of ISO (PMID:27193682) RGD PMID:27193682 NCBI chr12:32,009,010...32,025,484
Ensembl chr12:32,009,014...32,025,497
JBrowse link
G Gtf2h4 general transcription factor 2H subunit 4 part_of ISO (PMID:27193682) RGD PMID:27193682 NCBI chr20:3,071,328...3,076,990
Ensembl chr20:3,071,328...3,076,984
JBrowse link
G Gtf2h5 general transcription factor IIH subunit 5 part_of ISO
IBA
(PMID:27193682)
PMID:21873635
RGD PMID:27193682 PMID:21873635 RGD:13792537 NCBI chr 1:46,656,804...46,663,512
Ensembl chr 1:46,656,859...46,664,939
JBrowse link
G LOC120103497 general transcription factor IIH subunit 5-like part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:27,109,209...27,114,478
Ensembl chr 6:27,111,331...27,111,546
JBrowse link
G LOC690283 similar to TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor NOT|part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:59,890,127...59,892,594
Ensembl chr 1:59,890,278...59,891,258
JBrowse link
G Taf1 TATA-box binding protein associated factor 1 part_of
located_in
ISO (PMID:14580349), (PMID:24927529), (PMID:25412659), (PMID:27007846), (PMID:29111974), (PMID:8625415)
(PMID:23332750)
RGD PMID:8625415 PMID:14580349 PMID:23332750 PMID:24927529 PMID:25412659 More... NCBI chr  X:66,640,915...66,716,543
Ensembl chr  X:66,640,982...66,716,543
JBrowse link
G Taf10 TATA-box binding protein associated factor 10 part_of
located_in
ISO
IBA
(PMID:14580349), (PMID:15099517), (PMID:29111974), (PMID:7729427), (PMID:7923369)
(PMID:23332750)
PMID:21873635
RGD PMID:7729427 PMID:7923369 PMID:14580349 PMID:15099517 PMID:23332750 More... RGD:13792537 NCBI chr 1:160,095,108...160,096,401
Ensembl chr 1:160,095,108...160,096,376
JBrowse link
G Taf11 TATA-box binding protein associated factor 11 part_of
located_in
IBA
ISO
PMID:21873635
(PMID:23332750)
(PMID:14580349), (PMID:29111974), (PMID:7729427), (PMID:8670810)
RGD PMID:7729427 PMID:8670810 PMID:14580349 PMID:23332750 PMID:29111974 More... RGD:13792537 NCBI chr20:5,955,774...5,963,593
Ensembl chr20:5,955,777...5,961,905
JBrowse link
G Taf12 TATA-box binding protein associated factor 12 part_of
located_in
IBA
ISO
PMID:21873635
(PMID:23332750)
(PMID:14580349), (PMID:29111974)
RGD PMID:14580349 PMID:23332750 PMID:29111974 PMID:21873635 RGD:13792537 NCBI chr 5:144,472,816...144,490,299
Ensembl chr 5:144,472,841...144,488,849
JBrowse link
G Taf13 TATA-box binding protein associated factor 13 part_of
located_in
ISO
IBA
(PMID:29111974), (PMID:7729427)
(PMID:23332750)
PMID:21873635
RGD PMID:7729427 PMID:23332750 PMID:29111974 PMID:21873635 RGD:13792537 NCBI chr 2:196,205,219...196,215,882
Ensembl chr 2:196,205,243...196,215,878
JBrowse link
G Taf2 TATA-box binding protein associated factor 2 part_of
located_in
IBA
ISO
PMID:21873635
(PMID:23332750)
(PMID:10409744), (PMID:14580349), (PMID:27007846), (PMID:29111974), (PMID:9774672)
RGD PMID:9774672 PMID:10409744 PMID:14580349 PMID:23332750 PMID:27007846 More... RGD:13792537 NCBI chr 7:86,422,613...86,479,616
Ensembl chr 7:86,422,613...86,479,616
JBrowse link
G Taf3 TATA-box binding protein associated factor 3 part_of
located_in
ISO (PMID:11438666), (PMID:29111974)
(PMID:23332750)
RGD PMID:11438666 PMID:23332750 PMID:29111974 NCBI chr17:68,455,389...68,608,367
Ensembl chr17:68,423,909...68,608,367
JBrowse link
G Taf4 TATA-box binding protein associated factor 4 part_of
located_in
IBA
ISO
PMID:21873635
(PMID:23332750)
(PMID:14580349), (PMID:29111974)
RGD PMID:14580349 PMID:23332750 PMID:29111974 PMID:21873635 RGD:13792537 NCBI chr 3:167,017,992...167,083,413
Ensembl chr 3:167,017,993...167,083,356
JBrowse link
G Taf4b TATA-box binding protein associated factor 4b part_of IBA
ISO
PMID:21873635
(PMID:29111974)
RGD PMID:29111974 PMID:21873635 RGD:13792537 NCBI chr18:5,952,737...6,086,408
Ensembl chr18:5,952,769...6,068,307
JBrowse link
G Taf5 TATA-box binding protein associated factor 5 part_of
located_in
IBA
ISO
PMID:21873635
(PMID:23332750)
(PMID:14580349), (PMID:29111974), (PMID:9045704)
RGD PMID:9045704 PMID:14580349 PMID:23332750 PMID:29111974 PMID:21873635 RGD:13792537 NCBI chr 1:245,958,428...245,973,914
Ensembl chr 1:245,958,428...245,973,914
JBrowse link
G Taf5l TATA-box binding protein associated factor 5 like NOT|part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:51,991,704...52,011,001
Ensembl chr19:51,991,708...52,011,295
JBrowse link
G Taf6 TATA-box binding protein associated factor 6 part_of
located_in
ISO
IEA
IBA
(PMID:8262073)
(PMID:23332750)
(PMID:14580349), (PMID:27007846), (PMID:29111974)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:8262073 PMID:14580349 PMID:23332750 PMID:27007846 PMID:29111974 More... GO_REF:0000107, RGD:13792537 NCBI chr12:17,055,864...17,064,244
Ensembl chr12:17,055,873...17,064,247
JBrowse link
G Taf6l TATA-box binding protein associated factor 6 like part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:205,672,147...205,684,721
Ensembl chr 1:205,672,149...205,684,655
JBrowse link
G Taf7 TATA-box binding protein associated factor 7 part_of
located_in
IBA
ISO
PMID:21873635
(MGI:1342782|PMID:10438527), (MGI:5918349|PMID:28893950)
(PMID:23332750)
(PMID:14580349), (PMID:24927529), (PMID:25412659), (PMID:27007846), (PMID:29111974), (PMID:7824954)
RGD PMID:7824954 PMID:10438527 PMID:14580349 PMID:23332750 PMID:24927529 More... MGI:1342782 MGI:5918349, RGD:13792537 NCBI chr18:29,459,937...29,462,086
Ensembl chr18:29,452,943...29,462,134
JBrowse link
G Taf7l TATA-box binding protein associated factor 7-like part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:97,660,222...97,675,241
Ensembl chr  X:97,660,222...97,675,023
JBrowse link
G Taf7l-ps1 TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, pseudogene 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:51,763,259...51,764,401
Ensembl chr 7:51,763,259...51,764,401
JBrowse link
G Taf7l2 TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, pseudogene 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 7:51,763,259...51,764,401 JBrowse link
G Taf8 TATA-box binding protein associated factor 8 part_of
located_in
IBA
ISO
PMID:21873635
(PMID:23332750)
(PMID:14580349), (PMID:27007846), (PMID:29111974)
RGD PMID:14580349 PMID:23332750 PMID:27007846 PMID:29111974 PMID:21873635 RGD:13792537 NCBI chr 9:13,491,892...13,511,713
Ensembl chr 9:13,491,937...13,511,717
JBrowse link
G Taf9 TATA-box binding protein associated factor 9 part_of
located_in
IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:23332750)
(PMID:14580349), (PMID:15899866), (PMID:29111974)
Ensembl
RGD
PMID:14580349 PMID:15899866 PMID:23332750 PMID:29111974 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 2:31,794,316...31,798,324
Ensembl chr 2:31,794,142...31,798,769
JBrowse link
G Taf9b TATA-box binding protein associated factor 9b part_of IBA
ISO
PMID:21873635
(PMID:15899866), (PMID:29111974)
RGD PMID:15899866 PMID:29111974 PMID:21873635 RGD:13792537 NCBI chr  X:71,289,290...71,300,142
Ensembl chr  X:71,289,290...71,300,604
JBrowse link
G Tbp TATA box binding protein part_of
located_in
IDA
ISO
(MGI:5918349|PMID:28893950)
(PMID:23332750)
(PMID:14580349), (PMID:27007846), (PMID:27193682), (PMID:29111974), (PMID:7729427)
RGD PMID:7729427 PMID:14580349 PMID:23332750 PMID:27007846 PMID:27193682 More... MGI:5918349, RGD:2306552 NCBI chr 1:56,463,330...56,480,430
Ensembl chr 1:56,463,618...56,510,016
JBrowse link
G Tcea1 transcription elongation factor A1 part_of ISO (PMID:27193682) RGD PMID:27193682 NCBI chr 5:14,631,454...14,668,769
Ensembl chr 5:14,631,454...14,668,745
JBrowse link
transcription factor TFIIE complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gtf2e1 general transcription factor IIE subunit 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:63,182,073...63,215,349
Ensembl chr11:63,182,349...63,213,942
JBrowse link
G Gtf2e2 general transcription factor IIE subunit 2 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:58,399,307...58,449,467
Ensembl chr16:58,399,107...58,449,371
JBrowse link
transcription factor TFIIF complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gtf2f1 general transcription factor IIF subunit 1 part_of
located_in
IBA
ISO
PMID:21873635
(PMID:11183778)
RGD PMID:11183778 PMID:21873635 RGD:13792537 NCBI chr 9:1,844,027...1,853,455
Ensembl chr 9:1,843,901...1,853,423
JBrowse link
G Gtf2f2 general transcription factor IIF subunit 2 part_of
located_in
IEA
ISO
IBA
GO_REF:0000002
(PMID:11183778)
PMID:21873635
InterPro
RGD
PMID:11183778 PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr15:51,206,027...51,327,166
Ensembl chr15:51,206,031...51,327,253
JBrowse link
transcription factor TFIIH core complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnh cyclin H part_of ISO (PMID:8692841), (PMID:8692842) RGD PMID:8692841 PMID:8692842 NCBI chr 2:15,834,833...15,855,643
Ensembl chr 2:15,834,833...15,855,819
JBrowse link
G Cdk7 cyclin-dependent kinase 7 part_of IEA
ISO
GO_REF:0000107
(PMID:8692841)
Ensembl
RGD
PMID:8692841 GO_REF:0000107 NCBI chr 2:31,840,545...31,865,447
Ensembl chr 2:31,840,558...31,865,383
JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit part_of IDA
ISO
(PMID:8692841), (PMID:8692842) RGD PMID:8692841 PMID:8692842 PMID:8855220 RGD:1642642 NCBI chr 1:79,033,342...79,047,102
Ensembl chr 1:79,033,326...79,047,102
JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit part_of IDA
ISO
(PMID:8692841), (PMID:8692842) RGD PMID:8692841 PMID:8692842 PMID:8855220 RGD:1642642 NCBI chr18:23,883,613...23,914,326
Ensembl chr18:23,883,580...23,914,329
JBrowse link
G Gtf2h1 general transcription factor IIH subunit 1 part_of IBA
ISO
PMID:21873635
(PMID:8692841)
RGD PMID:8692841 PMID:21873635 RGD:13792537 NCBI chr 1:97,321,401...97,349,455
Ensembl chr 1:97,321,394...97,349,455
JBrowse link
G Gtf2h3 general transcription factor IIH subunit 3 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:32,009,010...32,025,484
Ensembl chr12:32,009,014...32,025,497
JBrowse link
G Gtf2h4 general transcription factor 2H subunit 4 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:3,071,328...3,076,990
Ensembl chr20:3,071,328...3,076,984
JBrowse link
G Gtf2h5 general transcription factor IIH subunit 5 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:46,656,804...46,663,512
Ensembl chr 1:46,656,859...46,664,939
JBrowse link
G LOC120103497 general transcription factor IIH subunit 5-like part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:27,109,209...27,114,478
Ensembl chr 6:27,111,331...27,111,546
JBrowse link
G Mnat1 MNAT1 component of CDK activating kinase part_of ISO (PMID:8692841) RGD PMID:8692841 NCBI chr 6:91,814,703...91,971,945
Ensembl chr 6:91,814,749...91,970,744
JBrowse link
transcription factor TFIIH holo complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnh cyclin H part_of ISS
ISO
GO_REF:0000024
(PMID:9852112)
UniProt
RGD
PMID:9852112 GO_REF:0000024 NCBI chr 2:15,834,833...15,855,643
Ensembl chr 2:15,834,833...15,855,819
JBrowse link
G Cdk7 cyclin-dependent kinase 7 part_of IDA
ISO
ISS
(PMID:9852112)
GO_REF:0000024
RGD
UniProt
PMID:9852112 PMID:7553866 GO_REF:0000024, RGD:9590319 NCBI chr 2:31,840,545...31,865,447
Ensembl chr 2:31,840,558...31,865,383
JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit part_of ISO (PMID:9852112) RGD PMID:9852112 NCBI chr 1:79,033,342...79,047,102
Ensembl chr 1:79,033,326...79,047,102
JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit part_of IBA
ISO
ISS
PMID:21873635
(PMID:9852112)
GO_REF:0000024
RGD
UniProt
PMID:9852112 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr18:23,883,613...23,914,326
Ensembl chr18:23,883,580...23,914,329
JBrowse link
G Gtf2f2 general transcription factor IIF subunit 2 IDA RGD PMID:7553866 RGD:9590319 NCBI chr15:51,206,027...51,327,166
Ensembl chr15:51,206,031...51,327,253
JBrowse link
G Gtf2h1 general transcription factor IIH subunit 1 part_of IDA
ISO
IBA
(PMID:9852112)
PMID:21873635
RGD PMID:9852112 PMID:7553866 PMID:21873635 RGD:9590319, RGD:13792537 NCBI chr 1:97,321,401...97,349,455
Ensembl chr 1:97,321,394...97,349,455
JBrowse link
G Gtf2h2 general transcription factor IIH subunit 2 part_of IBA
ISS
PMID:21873635
GO_REF:0000024
UniProt PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 2:31,623,752...31,652,697
Ensembl chr 2:31,624,678...31,652,592
JBrowse link
G Gtf2h3 general transcription factor IIH subunit 3 part_of ISO
ISS
IBA
(PMID:9852112)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:9852112 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr12:32,009,010...32,025,484
Ensembl chr12:32,009,014...32,025,497
JBrowse link
G Gtf2h4 general transcription factor 2H subunit 4 part_of ISO
IBA
(PMID:9852112)
PMID:21873635
RGD PMID:9852112 PMID:21873635 RGD:13792537 NCBI chr20:3,071,328...3,076,990
Ensembl chr20:3,071,328...3,076,984
JBrowse link
G Gtf2h5 general transcription factor IIH subunit 5 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:46,656,804...46,663,512
Ensembl chr 1:46,656,859...46,664,939
JBrowse link
G LOC120103497 general transcription factor IIH subunit 5-like part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:27,109,209...27,114,478
Ensembl chr 6:27,111,331...27,111,546
JBrowse link
G Mnat1 MNAT1 component of CDK activating kinase part_of ISO
IBA
(PMID:9852112)
PMID:21873635
RGD PMID:9852112 PMID:21873635 RGD:13792537 NCBI chr 6:91,814,703...91,971,945
Ensembl chr 6:91,814,749...91,970,744
JBrowse link
transcription factor TFIIK complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnh cyclin H part_of IBA
ISO
PMID:21873635
(PMID:8692841)
RGD PMID:8692841 PMID:21873635 RGD:13792537 NCBI chr 2:15,834,833...15,855,643
Ensembl chr 2:15,834,833...15,855,819
JBrowse link
G Cdk7 cyclin-dependent kinase 7 part_of IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:8692841)
Ensembl
RGD
PMID:8692841 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 2:31,840,545...31,865,447
Ensembl chr 2:31,840,558...31,865,383
JBrowse link
G Mnat1 MNAT1 component of CDK activating kinase part_of ISO (PMID:8692841) RGD PMID:8692841 NCBI chr 6:91,814,703...91,971,945
Ensembl chr 6:91,814,749...91,970,744
JBrowse link
transcription factor TFTC complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kat2a lysine acetyltransferase 2A part_of ISO (PMID:10373431) RGD PMID:10373431 NCBI chr10:85,632,216...85,640,561
Ensembl chr10:85,632,216...85,640,166
JBrowse link
G LOC690283 similar to TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:59,890,127...59,892,594
Ensembl chr 1:59,890,278...59,891,258
JBrowse link
G Supt3h SPT3 homolog, SAGA and STAGA complex component part_of ISO (PMID:10373431) RGD PMID:10373431 NCBI chr 9:15,878,296...16,206,768
Ensembl chr 9:15,868,287...16,206,706
JBrowse link
G Tada3 transcriptional adaptor 3 part_of ISO (PMID:10373431) RGD PMID:10373431 NCBI chr 4:146,510,213...146,521,975
Ensembl chr 4:146,510,246...146,521,590
JBrowse link
G Taf10 TATA-box binding protein associated factor 10 part_of ISO (PMID:10373431), (PMID:9603525) RGD PMID:9603525 PMID:10373431 NCBI chr 1:160,095,108...160,096,401
Ensembl chr 1:160,095,108...160,096,376
JBrowse link
G Taf12 TATA-box binding protein associated factor 12 part_of ISO (PMID:9603525) RGD PMID:9603525 NCBI chr 5:144,472,816...144,490,299
Ensembl chr 5:144,472,841...144,488,849
JBrowse link
G Taf2 TATA-box binding protein associated factor 2 part_of ISO (PMID:10373431) RGD PMID:10373431 NCBI chr 7:86,422,613...86,479,616
Ensembl chr 7:86,422,613...86,479,616
JBrowse link
G Taf4 TATA-box binding protein associated factor 4 part_of ISO (PMID:10373431), (PMID:9603525) RGD PMID:9603525 PMID:10373431 NCBI chr 3:167,017,992...167,083,413
Ensembl chr 3:167,017,993...167,083,356
JBrowse link
G Taf5 TATA-box binding protein associated factor 5 part_of ISO (PMID:10373431), (PMID:9603525) RGD PMID:9603525 PMID:10373431 NCBI chr 1:245,958,428...245,973,914
Ensembl chr 1:245,958,428...245,973,914
JBrowse link
G Taf5l TATA-box binding protein associated factor 5 like part_of ISO (PMID:10373431) RGD PMID:10373431 NCBI chr19:51,991,704...52,011,001
Ensembl chr19:51,991,708...52,011,295
JBrowse link
G Taf6 TATA-box binding protein associated factor 6 part_of ISO
IEA
(PMID:9603525)
GO_REF:0000107
RGD
Ensembl
PMID:9603525 GO_REF:0000107 NCBI chr12:17,055,864...17,064,244
Ensembl chr12:17,055,873...17,064,247
JBrowse link
G Taf7 TATA-box binding protein associated factor 7 part_of ISO (PMID:9603525) RGD PMID:9603525 NCBI chr18:29,459,937...29,462,086
Ensembl chr18:29,452,943...29,462,134
JBrowse link
G Taf9 TATA-box binding protein associated factor 9 part_of ISO
IEA
IBA
(PMID:15899866)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:15899866 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 2:31,794,316...31,798,324
Ensembl chr 2:31,794,142...31,798,769
JBrowse link
G Taf9b TATA-box binding protein associated factor 9b part_of ISO (PMID:15899866) RGD PMID:15899866 NCBI chr  X:71,289,290...71,300,142
Ensembl chr  X:71,289,290...71,300,604
JBrowse link
G Trrap transformation/transcription domain-associated protein part_of ISO (PMID:10373431) RGD PMID:10373431 NCBI chr12:9,738,006...9,827,708
Ensembl chr12:9,738,006...9,827,674
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19969
    protein-containing complex 6133
      transcription regulator complex 507
        RNA polymerase II transcription regulator complex 237
          ATF1-ATF4 transcription factor complex 2
          ATF4-CREB1 transcription factor complex 4
          C/EBP complex 2
          CCAAT-binding factor complex 6
          CHOP-ATF4 complex 2
          CHOP-C/EBP complex 3
          CLOCK-BMAL transcription complex 4
          CSL-Notch-Mastermind transcription factor complex 0
          ISGF3 complex 3
          M/G1 phase-specific MADS box-forkhead transcription factor complex 0
          MBF transcription complex 0
          Myc-Max complex 2
          Nkx-2.5 complex 0
          Pi Mi complex 0
          Pip2-Oaf1 complex 0
          Rb-E2F complex 4
          SBF transcription complex 0
          SMN-Gemin2 complex 1
          SRF-myogenin-E12 complex 0
          TEAD-YAP complex 3
          activating signal cointegrator 1 complex 3
          activin responsive factor complex 3
          beta-catenin-TCF complex + 13
          core mediator complex 26
          core-binding factor complex 2
          ecdysone receptor holocomplex + 0
          heteromeric SMAD protein complex 8
          insulin control element activator complex 0
          transcription factor AP-1 complex + 5
          transcription factor TFIIA complex 6
          transcription factor TFIID complex + 35
          transcription factor TFIIE complex 2
          transcription factor TFIIF complex 2
          transcription factor TFIIH core complex + 11
          transcription factor TFIIH holo complex + 12
          transcription factor TFIIK complex 3
          transcription factor TFTC complex 15
          upstream stimulatory factor complex 0
Path 2
Term Annotations click to browse term
  cellular_component 19969
    cellular anatomical entity 19686
      intracellular anatomical structure 14329
        intracellular organelle 12679
          intracellular membrane-bounded organelle 11208
            nucleus 7044
              nuclear protein-containing complex 1290
                RNA polymerase II transcription regulator complex 237
                  ATF1-ATF4 transcription factor complex 2
                  ATF4-CREB1 transcription factor complex 4
                  C/EBP complex 2
                  CCAAT-binding factor complex 6
                  CHOP-ATF4 complex 2
                  CHOP-C/EBP complex 3
                  CLOCK-BMAL transcription complex 4
                  CSL-Notch-Mastermind transcription factor complex 0
                  ISGF3 complex 3
                  M/G1 phase-specific MADS box-forkhead transcription factor complex 0
                  MBF transcription complex 0
                  Myc-Max complex 2
                  Nkx-2.5 complex 0
                  Pi Mi complex 0
                  Pip2-Oaf1 complex 0
                  Rb-E2F complex 4
                  SBF transcription complex 0
                  SMN-Gemin2 complex 1
                  SRF-myogenin-E12 complex 0
                  TEAD-YAP complex 3
                  activating signal cointegrator 1 complex 3
                  activin responsive factor complex 3
                  beta-catenin-TCF complex + 13
                  core mediator complex 26
                  core-binding factor complex 2
                  ecdysone receptor holocomplex + 0
                  heteromeric SMAD protein complex 8
                  insulin control element activator complex 0
                  transcription factor AP-1 complex + 5
                  transcription factor TFIIA complex 6
                  transcription factor TFIID complex + 35
                  transcription factor TFIIE complex 2
                  transcription factor TFIIF complex 2
                  transcription factor TFIIH core complex + 11
                  transcription factor TFIIH holo complex + 12
                  transcription factor TFIIK complex 3
                  transcription factor TFTC complex 15
                  upstream stimulatory factor complex 0
paths to the root