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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:Liver Abscess
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Accession:DOID:9002668 term browser browse the term
Definition:Solitary or multiple collections of PUS within the liver as a result of infection by bacteria, protozoa, or other agents.
Synonyms:exact_synonym: Hepatic Abscess;   Hepatic Abscesses;   Liver Abscesses
 primary_id: MESH:D008100


show annotations for term's descendants           Sort by:
Liver Abscess term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TREM1 triggering receptor expressed on myeloid cells 1 severity ISO associated with Klebsiella pneumonia RGD PMID:24396044 RGD:126925976 NCBI chr12:9,990,678...10,000,195
Ensembl chr12:9,990,679...10,000,236 		JBrowse link
Amebic Liver Abscess term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLA-DQB1 major histocompatibility complex, class II, DQ beta 1 susceptibility ISO DNA:polymorphism, haplotype: :HLA-DQB1*04, HLA-DQB1*02 RGD PMID:25938667 RGD:36049810 NCBI chr12:2,305,307...2,307,711 JBrowse link
G DLA-DRB1 MHC class II DLA DRB1 beta chain susceptibility ISO DNA:polymorphism, haplotype: :HLA-DRB1*08 RGD PMID:25938667 RGD:36049810 NCBI chr12:2,151,409...2,164,564 JBrowse link
G IL2 interleukin 2 treatment ISO RGD PMID:10862314 RGD:14928216 NCBI chr19:17,750,780...17,756,394
Ensembl chr19:17,750,780...17,756,394 		JBrowse link
G IL23A interleukin 23 subunit alpha ISO RGD PMID:26809113 RGD:39458041 NCBI chr10:635,384...640,715
Ensembl chr10:638,719...640,359 		JBrowse link
G TNF tumor necrosis factor treatment ISO RGD PMID:10862314 RGD:14928216 NCBI chr12:1,074,561...1,076,425
Ensembl chr12:1,074,552...1,076,425 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 15674
    disease of anatomical entity 15314
      endocrine system disease 6130
        liver disease 2844
          Liver Abscess 6
            Amebic Liver Abscess 5
            Pyogenic Liver Abscesses 0
Path 2
Term Annotations click to browse term
  disease 15674
    disease of anatomical entity 15314
      Immune & Inflammatory Diseases 5189
        Inflammation 2492
          Suppuration 40
            Abscess 11
              Abdominal Abscess 6
                Liver Abscess 6
                  Amebic Liver Abscess 5
                  Pyogenic Liver Abscesses 0
paths to the root