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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:clear cell adenocarcinoma
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Accession:DOID:4468 term browser browse the term
Definition:An adenocarcinoma that derives_from epithelial cells which have clear cytoplasm. (DO)
Synonyms:exact_synonym: EFO:0000348;   Wolffian duct neoplasm;   clear cell adenocarcinomas;   malignant mesonephroma;   mesonephric adenocarcinoma;   mesonephroid clear cell carcinoma;   water-clear cell adenocarcinoma;   water-clear cell carcinoma
 primary_id: MESH:D018262
 xref: EFO:0000348;   EFO:0006719;   ICDO:8310/3;   NCI:C36815;   NCI:C3766;   NCI:C4072;   NCI:C4156
For additional species annotation, visit the Alliance of Genome Resources.


show annotations for term's descendants           Sort by:
clear cell adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator ISO CTD Direct Evidence: marker/mechanism CTD PMID:9754764 NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
G Cbx7 chromobox 7 disease_progression ISO RGD PMID:24375438 RGD:9587359 NCBI chr 7:111,460,656...111,479,231
Ensembl chr 7:111,460,656...111,477,973 		JBrowse link
G Daxx death-domain associated protein ISO protein:increased expression:ovary: RGD PMID:23539629 RGD:9587820 NCBI chr20:4,970,090...4,976,145
Ensembl chr20:4,970,092...4,975,843 		JBrowse link
G Tp53 tumor protein p53 ISO CTD Direct Evidence: marker/mechanism CTD PMID:9754764 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 19102
    disease of cellular proliferation 7914
      Neoplasms by Histologic Type 5403
        Germ Cell and Embryonal Neoplasms 581
          Mesonephroma 10
            clear cell adenocarcinoma 4
              bile duct clear cell adenocarcinoma + 0
              bladder clear cell adenocarcinoma + 0
              cervical clear cell adenocarcinoma 0
              endometrial clear cell adenocarcinoma 0
              fallopian tube clear cell adenocarcinoma 0
              ovarian clear cell adenocarcinoma 0
              urethra clear cell adenocarcinoma 0
              uterine ligament clear cell adenocarcinoma 0
Path 2
Term Annotations click to browse term
  disease 19102
    disease of cellular proliferation 7914
      cancer 5769
        cell type cancer 3842
          carcinoma 3282
            adenocarcinoma 1714
              clear cell adenocarcinoma 4
                bile duct clear cell adenocarcinoma + 0
                bladder clear cell adenocarcinoma + 0
                cervical clear cell adenocarcinoma 0
                endometrial clear cell adenocarcinoma 0
                fallopian tube clear cell adenocarcinoma 0
                ovarian clear cell adenocarcinoma 0
                urethra clear cell adenocarcinoma 0
                uterine ligament clear cell adenocarcinoma 0
paths to the root