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Charcot-Marie-Tooth disease type 6 - Ontology Report - Rat Genome Database

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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:Charcot-Marie-Tooth disease type 6
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Accession:DOID:0080068 term browser browse the term
Definition:A Charcot-Marie-Tooth disease that is characterized by early-onset optic atrophy resulting in progressive visual loss and peripheral axonal sensorimotor neuropathy with highly variable age at onset and severity. (DO)
Synonyms:exact_synonym: CMT6;   Charcot-Marie-Tooth disease 6;   HMSN VI;   HMSN6;   hereditary motor and sensory neuropathy VI;   hereditary motor and sensory neuropathy type 6;   hereditary motor and sensory neuropathy, type VI;   peripheral neuropathy and optic atrophy
 primary_id: MESH:C562851


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Charcot-Marie-Tooth disease type 6 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mfn2 mitofusin 2 ISO DNA:missense mutations, nonsense mutation:cds:multiple
ClinVar Annotator: match by term: CHARCOT-MARIE-TOOTH DISEASE, TYPE 6 | ClinVar Annotator: match by term: PERIPHERAL NEUROPATHY AND OPTIC ATROPHY
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
RGD
PMID:8406488 PMID:15064763 PMID:15549395 PMID:16043786 PMID:16437557 More... RGD:1601409 NCBI chr 5:163,587,463...163,617,363
Ensembl chr 5:158,304,287...158,335,342
JBrowse link
G Mtrfr mitochondrial translation release factor in rescue ISO ClinVar Annotator: match by term: PERIPHERAL NEUROPATHY AND OPTIC ATROPHY ClinVar PMID:25741868 PMID:31673878 NCBI chr12:37,922,532...37,936,219
Ensembl chr12:32,258,435...32,275,258
JBrowse link
G Plod1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 ISO ClinVar Annotator: match by term: PERIPHERAL NEUROPATHY AND OPTIC ATROPHY ClinVar PMID:25741868 NCBI chr 5:163,623,847...163,650,737
Ensembl chr 5:158,340,490...158,367,620
JBrowse link
G Slc25a46 solute carrier family 25, member 46 ISS OMIM:601152 | OMIM:616505 MouseDO NCBI chr18:23,490,422...23,519,599
Ensembl chr18:23,215,962...23,244,314
JBrowse link
Charcot-Marie-Tooth Disease Type 6A term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mfn2 mitofusin 2 ISO ClinVar Annotator: match by term: CHARCOT-MARIE-TOOTH DISEASE, TYPE 6A | ClinVar Annotator: match by term: HMSN VIA | ClinVar Annotator: match by term: NEUROPATHY, HEREDITARY MOTOR AND SENSORY, TYPE VIA, WITH OPTIC ATROPHY OMIM
ClinVar
PMID:9409358 PMID:9536098 PMID:10732809 PMID:15064763 PMID:15549395 More... NCBI chr 5:163,587,463...163,617,363
Ensembl chr 5:158,304,287...158,335,342
JBrowse link
Charcot-Marie-Tooth Disease Type 6B term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc25a46 solute carrier family 25, member 46 ISO ClinVar Annotator: match by term: CHARCOT-MARIE-TOOTH DISEASE, TYPE 6B | ClinVar Annotator: match by term: NEUROPATHY, HEREDITARY MOTOR AND SENSORY, TYPE VIB | ClinVar Annotator: match by term: NEUROPATHY, HEREDITARY MOTOR AND SENSORY, TYPE VIB, WITH OPTIC ATROPHY | ClinVar Annotator: match by term: Neuropathy, hereditary motor and sensory, type VIB OMIM
ClinVar
PMID:9536098 PMID:16199547 PMID:17576681 PMID:25640679 PMID:25741868 More... NCBI chr18:23,490,422...23,519,599
Ensembl chr18:23,215,962...23,244,314
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 19140
    disease of anatomical entity 18453
      musculoskeletal system disease 8461
        neuromuscular disease 3226
          Charcot-Marie-Tooth disease 729
            Charcot-Marie-Tooth disease type 6 4
              Charcot-Marie-Tooth Disease Type 6A 1
              Charcot-Marie-Tooth Disease Type 6B 1
              Charcot-Marie-Tooth Disease Type 6C 0
Path 2
Term Annotations click to browse term
  disease 19140
    disease of anatomical entity 18453
      nervous system disease 14363
        central nervous system disease 12640
          neurodegenerative disease 5076
            Nervous System Heredodegenerative Disorders 3369
              motor peripheral neuropathy 1303
                Charcot-Marie-Tooth disease 729
                  Charcot-Marie-Tooth disease type 6 4
                    Charcot-Marie-Tooth Disease Type 6A 1
                    Charcot-Marie-Tooth Disease Type 6B 1
                    Charcot-Marie-Tooth Disease Type 6C 0
paths to the root