Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

CLINICAL MEASUREMENT - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:lumbar vertebra area
go back to main search page
Accession:CMO:0001688 term browser browse the term
Definition:A measurement of the extent of a two-dimensional surface of or plane through a lumbar vertebra, any of the individual bones forming the portion of the spinal column (the protective bony corridor through which the spinal cord passes) between the thoracic vertebrae in the chest region and the sacrum in the hip region.


show annotations for term's descendants           Sort by:
lumbar vertebra area term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss119 Bone structure and strength QTL 119 IDA RGD PMID:26297441 RGD:11528619
lumbar vertebra cortical cross-sectional area term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss44 Bone structure and strength QTL 44 IDA RGD PMID:18158281 RGD:2293455 NCBI chr 2:43,162,366...148,478,373 JBrowse link
Q Bss45 Bone structure and strength QTL 45 IDA RGD PMID:18158281 RGD:2293455 NCBI chr16:37,752,156...82,752,156 JBrowse link
Q Bss46 Bone structure and strength QTL 46 IDA RGD PMID:18158281 RGD:2293455 NCBI chr18:11,791,518...63,636,873 JBrowse link
lumbar vertebra cross-sectional area term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd2 Bone mineral density QTL 2 IDA L5 lumbar vertebra total cross-sectional area RGD PMID:16180139 RGD:1553896 NCBI chr 2:114,837,675...212,549,332 JBrowse link
Q Bss41 Bone structure and strength QTL 41 IDA RGD PMID:18158281 RGD:2293455 NCBI chr 1:171,629,477...216,629,477 JBrowse link
Q Bss42 Bone structure and strength QTL 42 IDA RGD PMID:18158281 RGD:2293455 NCBI chr 7:47,651,439...92,651,439 JBrowse link
Q Bss43 Bone structure and strength QTL 43 IDA RGD PMID:18158281 RGD:2293455 NCBI chr10:59,209,888...104,209,888 JBrowse link
lumbar vertebra trabecular cross-sectional area term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss47 Bone structure and strength QTL 47 IDA RGD PMID:18158281 RGD:2293455 NCBI chr 1:171,629,477...216,629,477 JBrowse link
Q Bss48 Bone structure and strength QTL 48 IDA RGD PMID:18158281 RGD:2293455
Q Bss49 Bone structure and strength QTL 49 IDA RGD PMID:18158281 RGD:2293455 NCBI chr12:10,474,137...46,669,029 JBrowse link
Q Bss50 Bone structure and strength QTL 50 IDA RGD PMID:18158281 RGD:2293455 NCBI chr18:1...34,291,613 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  clinical measurement 2369
    body morphological measurement 733
      skeleton morphological measurement 201
        bone morphological measurement 179
          vertebra morphological measurement 12
            vertebra area 12
              lumbar vertebra area 12
                lumbar vertebra cross-sectional area + 11
Path 2
Term Annotations click to browse term
  clinical measurement 2369
    musculoskeletal system measurement 297
      skeletal system measurement 235
        skeleton morphological measurement 201
          bone morphological measurement 179
            bone area measurement 82
              vertebra area 12
                lumbar vertebra area 12
                  lumbar vertebra cross-sectional area + 11
paths to the root