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CLINICAL MEASUREMENT - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (https://rgd.mcw.edu/rgdweb/contact/contactus.html).
Term:skeleton morphological measurement
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Accession:CMO:0000437 term browser browse the term
Definition:Measurement of the physical form or structure of the bony framework of the body or a portion of this framework.
Synonyms:related_synonym: skeletal morphological measurement


show annotations for term's descendants           Sort by:
ankle joint diameter term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Aia23 Adjuvant induced arthritis QTL 23 IDA 2.3 RGD PMID:19526527 RGD:2316974 NCBI chr13:11,766,535...32,331,607 JBrowse link
bone mineral content term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd82 Bone mineral density QTL 82 IDA 2.8 update to tibia specific term RGD PMID:21818327 RGD:5684953 NCBI chr 2:59,324,377...103,795,077 JBrowse link
Q Bmd83 Bone mineral density QTL 82 IDA 4.8 update to tibia specific term RGD PMID:21818327 RGD:5684953
Q Bmd84 Bone mineral density QTL 84 IDA 4.1 update to tibia specific term RGD PMID:21818327 RGD:5684953 NCBI chr 8:42,692,684...50,095,447 JBrowse link
Q Bmd87 Bone mineral density QTL 87 IDA 5.1 update to tibia specific term RGD PMID:21818327 RGD:5684953 NCBI chr 4:56,647,776...78,882,945 JBrowse link
bone mineral density term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd40 Bone mineral density QTL 40 IDA 1.0E-4 15.4 RGD PMID:18707222 RGD:2300109 NCBI chr 1:201,554,356...246,554,356 JBrowse link
Q Bmd42 Bone mineral density QTL 42 IDA 1.0E-4 8.4 RGD PMID:18707222 RGD:2300109 NCBI chr 1:171,629,477...216,629,477 JBrowse link
Q Bmd47 Bone mineral density QTL 47 IDA 1.0E-4 6.6 RGD PMID:18707222 RGD:2300109 NCBI chr 2:20,662,448...65,662,448 JBrowse link
Q Bmd49 Bone mineral density QTL 49 IDA 1.0E-4 4.8 RGD PMID:18707222 RGD:2300109 NCBI chr 2:88,862,519...133,862,519 JBrowse link
Q Bmd51 Bone mineral density QTL 51 IDA 1.0E-4 11.7 RGD PMID:18707222 RGD:2300109 NCBI chr 6:1...27,574,569 JBrowse link
Q Bmd67 Bone mineral density QTL 67 IDA 1.0E-4 4.8 RGD PMID:18707222 RGD:2300109 NCBI chr18:1...34,291,613 JBrowse link
Q Bmd85 Bone mineral density QTL 85 IDA 0.024 4.7 update to tibia specific term RGD PMID:21818327 RGD:5684953 NCBI chr 2:59,324,377...103,795,077 JBrowse link
Q Bmd86 Bone mineral density QTL 86 IDA 3.7 update to tibia specific term RGD PMID:21818327 RGD:5684953 NCBI chr 4:56,647,776...78,882,945 JBrowse link
bone polar moment of inertia term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss57 Bone structure and strength QTL 57 IDA 1.0E-4 3.7 update to tibia specific term RGD PMID:19113924 RGD:2312767 NCBI chr 1:43,284,731...118,944,897 JBrowse link
Q Bss63 Bone structure and strength QTL 63 IDA 1.0E-4 1.4 update to tibia specific term RGD PMID:19113924 RGD:2312767 NCBI chr10:5,387,014...50,387,014 JBrowse link
Q Bss69 Bone structure and strength QTL 69 IDA 1.0E-4 3.5 update to tibia specific term RGD PMID:19113924 RGD:2312767 NCBI chr 1:11,481,312...82,174,945 JBrowse link
bone trabecular cross-sectional area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss14 Bone structure and strength QTL 14 IDA 16.4 RGD PMID:16461031 RGD:1578307 NCBI chr 4:87,327,165...132,327,165 JBrowse link
Q Bss16 Bone structure and strength QTL 16 IDA 4.4 RGD PMID:16461031 RGD:1578307 NCBI chr 6:11,735,669...72,593,685 JBrowse link
Q Bss19 Bone structure and strength QTL 19 IDA 4.3 RGD PMID:16461031 RGD:1578307 NCBI chr15:22,806,240...98,288,169 JBrowse link
Q Bss9 Bone structure and strength QTL 9 IDA 6.3 RGD PMID:16461031 RGD:1578307 NCBI chr 1:509,108...43,284,926 JBrowse link
compact volumetric bone mineral density term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd10 Bone mineral density QTL 10 IDA 5.4 femoral neck cortical volumetric bone mineral density RGD PMID:16461031 RGD:1578307
Q Bmd12 Bone mineral density QTL 12 IDA 3.8 RGD PMID:16461031 RGD:1578307 NCBI chr 4:135,699,135...180,699,135 JBrowse link
Q Bmd16 Bone mineral density QTL 16 IDA 6.2 RGD PMID:16461031 RGD:1578307 NCBI chr10:96,703,043...107,057,807 JBrowse link
Q Bmd24 Bone mineral density QTL 24 IDA 1.0E-4 8.9 RGD PMID:18282130 RGD:2293456 NCBI chr 2:43,162,366...111,362,592 JBrowse link
Q Bmd25 Bone mineral density QTL 25 IDA 1.0E-4 7.1 RGD PMID:18282130 RGD:2293456 NCBI chr10:49,444,551...81,709,989 JBrowse link
Q Bmd69 Bone mineral density QTL 69 IDA 1.0E-4 4.4 RGD PMID:19113924 RGD:2312767 NCBI chr 1:1...32,356,093 JBrowse link
Q Bmd7 Bone mineral density QTL 7 IDA 14.2 femoral neck cortical volumetric bone mineral density RGD PMID:16461031 RGD:1578307 NCBI chr 1:509,108...43,284,926 JBrowse link
Q Bmd70 Bone mineral density QTL 70 IDA 1.0E-4 3.6 RGD PMID:19113924 RGD:2312767 NCBI chr 1:43,284,731...118,944,897 JBrowse link
Q Bmd71 Bone mineral density QTL 71 IDA 1.0E-4 0.9 RGD PMID:19113924 RGD:2312767 NCBI chr10:5,387,014...50,387,014 JBrowse link
Q Bmd73 Bone mineral density QTL 73 IDA 1.0E-4 3.9 RGD PMID:19113924 RGD:2312767 NCBI chr 1:11,481,312...82,174,945 JBrowse link
Q Bmd77 Bone mineral density QTL 77 IDA 1.0E-4 2.2 RGD PMID:19113924 RGD:2312767 NCBI chr 3:27,494,621...50,302,886 JBrowse link
femoral neck cortical cross-sectional area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd31 Bone mineral density QTL 31 IDA 1.0E-4 4.5 RGD PMID:18282130 RGD:2293456 NCBI chr17:4,354,487...27,028,127 JBrowse link
Q Bmd38 Bone mineral density QTL 38 IDA 4.4 RGD PMID:18282130 RGD:2293456 NCBI chr 5:8,948,228...53,948,228 JBrowse link
Q Bss10 Bone structure and strength QTL 10 IDA 4.0 RGD PMID:16461031 RGD:1578307 NCBI chr 1:49,393,172...159,356,837 JBrowse link
Q Bss11 Bone structure and strength QTL 11 IDA 4.7 RGD PMID:16461031 RGD:1578307 NCBI chr 2:114,837,527...211,674,221 JBrowse link
Q Bss17 Bone structure and strength QTL 17 IDA 3.8 RGD PMID:16461031 RGD:1578307 NCBI chr 9:3,368,652...13,533,896 JBrowse link
Q Bss21 Bone structure and strength QTL 21 IDA 3.5 RGD PMID:16461031 RGD:1578307 NCBI chr18:11,791,518...83,218,561 JBrowse link
femoral neck cross-sectional area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd29 Bone mineral density QTL 29 IDA 1.0E-4 5.4 RGD PMID:18282130 RGD:2293456 NCBI chr 7:47,651,439...92,651,439 JBrowse link
Q Bmd90 Bone mineral density QTL 90 IDA 5.2 RGD PMID:18282130 RGD:2293456 NCBI chr10:49,444,551...81,709,989 JBrowse link
Q Bmd91 Bone mineral density QTL 91 IDA 3.5 RGD PMID:18282130 RGD:2293456 NCBI chr 9:23,754,144...83,851,531 JBrowse link
Q Bss12 Bone structure and strength QTL 12 IDA 8.9 RGD PMID:16461031 RGD:1578307 NCBI chr 4:60,220,938...105,220,938 JBrowse link
Q Bss20 Bone structure and strength QTL 20 IDA 3.7 RGD PMID:16461031 RGD:1578307 NCBI chr18:11,791,518...83,218,561 JBrowse link
femoral neck polar moment of inertia term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd32 Bone mineral density QTL 32 IDA 1.0E-4 5.1 RGD PMID:18282130 RGD:2293456 NCBI chr 7:47,651,439...92,651,439 JBrowse link
Q Bmd33 Bone mineral density QTL 33 IDA 1.0E-4 4.5 RGD PMID:18282130 RGD:2293456 NCBI chr10:49,444,551...81,709,989 JBrowse link
Q Bss13 Bone structure and strength QTL 13 IDA 8.0 RGD PMID:16461031 RGD:1578307 NCBI chr 4:60,220,938...105,220,938 JBrowse link
femoral neck width term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss113 Bone structure and strength QTL 113 IDA 1.7E-10 9.75 RGD PMID:26297441 RGD:11528619 NCBI chr 3:16,490,648...19,241,681 JBrowse link
Q Bss120 Bone structure and strength QTL 120 IDA 2.7E-9 8.55 RGD PMID:26297441 RGD:11528619 NCBI chr17:77,830,064...78,603,788 JBrowse link
Q Bss15 Bone structure and strength QTL 15 IDA 19.6 RGD PMID:16461031 RGD:1578307 NCBI chr 4:87,327,165...132,327,165 JBrowse link
Q Bss18 Bone structure and strength QTL 18 IDA 3.6 RGD PMID:16461031 RGD:1578307 NCBI chr10:96,703,043...107,057,807 JBrowse link
femur cross-sectional area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss22 Bone structure and strength QTL 22 IDA 1.0E-4 33.52 RGD PMID:18158281 RGD:2293455 NCBI chr 1:171,629,477...216,629,477 JBrowse link
Q Bss23 Bone structure and strength QTL 23 IDA 1.0E-4 5.18 RGD PMID:18158281 RGD:2293455 NCBI chr 6:1...42,487,980 JBrowse link
Q Bss24 Bone structure and strength QTL 24 IDA 1.0E-4 6.71 RGD PMID:18158281 RGD:2293455 NCBI chr 7:47,651,439...92,651,439 JBrowse link
Q Bss25 Bone structure and strength QTL 25 IDA 1.0E-4 10.96 RGD PMID:18158281 RGD:2293455 NCBI chr10:69,738,412...107,211,142 JBrowse link
Q Bss26 Bone structure and strength QTL 26 IDA 1.0E-4 4.6 RGD PMID:18158281 RGD:2293455 NCBI chr13:65,103,704...106,807,694 JBrowse link
femur head width term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss115 Bone structure and strength QTL 115 IDA 2.7E-7 6.56 RGD PMID:26297441 RGD:11528619 NCBI chr 8:80,802,332...81,664,473 JBrowse link
femur length term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss116 Bone structure and strength QTL 116 IDA 3.8E-7 6.46 RGD PMID:26297441 RGD:11528619 NCBI chr10:44,179,770...45,632,973 JBrowse link
Q Bss121 Bone structure and strength QTL 121 IDA 1.9E-7 6.72 RGD PMID:26297441 RGD:11528619 NCBI chr20:33,221,477...35,747,124 JBrowse link
femur midshaft cortical cross-sectional area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss111 Bone structure and strength QTL 111 IDA 6.4 RGD PMID:16059631 RGD:1549683 NCBI chr 2:211,744,537...249,053,267 JBrowse link
Q Bss112 Bone structure and strength QTL 112 IDA 7.0 RGD PMID:16059631 RGD:1549683 NCBI chr 5:106,906,205...151,906,205 JBrowse link
Q Bss27 Bone structure and strength QTL 27 IDA 1.0E-4 18.63 RGD PMID:18158281 RGD:2293455 NCBI chr 1:171,629,477...216,629,477 JBrowse link
Q Bss28 Bone structure and strength QTL 28 IDA 1.0E-4 6.79 RGD PMID:18158281 RGD:2293455 NCBI chr 6:1...42,487,980 JBrowse link
Q Bss29 Bone structure and strength QTL 29 IDA 1.0E-4 5.31 RGD PMID:18158281 RGD:2293455 NCBI chr15:11,111,142...56,111,142 JBrowse link
Q Bss3 Bone structure and strength QTL 3 IDA 11.0 RGD PMID:16059631 RGD:1549683 NCBI chr 4:109,827,074...154,827,074 JBrowse link
femur midshaft polar moment of inertia term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss105 Bone structure and strength QTL 105 IDA 8.1 RGD PMID:16059631 RGD:1549683 NCBI chr 4:109,827,074...154,827,074 JBrowse link
Q Bss2 Bone structure and strength QTL 2 IDA 7.5 RGD PMID:16059631 RGD:1549683 NCBI chr 2:211,744,537...249,053,267 JBrowse link
Q Bss30 Bone structure and strength QTL 30 IDA 1.0E-4 32.65 RGD PMID:18158281 RGD:2293455 NCBI chr 1:171,629,477...216,629,477 JBrowse link
Q Bss31 Bone structure and strength QTL 31 IDA 1.0E-4 5.05 RGD PMID:18158281 RGD:2293455 NCBI chr 6:1...42,487,980 JBrowse link
Q Bss32 Bone structure and strength QTL 32 IDA 1.0E-4 7.64 RGD PMID:18158281 RGD:2293455 NCBI chr 7:47,651,439...92,651,439 JBrowse link
Q Bss33 Bone structure and strength QTL 33 IDA 1.0E-4 9.34 RGD PMID:18158281 RGD:2293455 NCBI chr10:69,738,412...107,211,142 JBrowse link
Q Bss34 Bone structure and strength QTL 34 IDA 1.0E-4 4.61 RGD PMID:18158281 RGD:2293455 NCBI chr13:65,103,704...106,807,694 JBrowse link
Q Bss35 Bone structure and strength QTL 35 IDA 2.0E-4 4.59 RGD PMID:18158281 RGD:2293455 NCBI chr18:28,964,853...73,964,853 JBrowse link
Q Bss4 Bone structure and strength QTL 4 IDA 9.2 RGD PMID:16059631 RGD:1549683 NCBI chr 5:106,906,205...151,906,205 JBrowse link
Q Bss5 Bone structure and strength QTL 5 IDA 9.8 RGD PMID:16059631 RGD:1549683 NCBI chr 7:24,751,841...69,751,841 JBrowse link
Q Bss7 Bone structure and strength QTL 7 IDA 6.4 RGD PMID:16059631 RGD:1549683 NCBI chr15:75,788,062...101,769,107 JBrowse link
left rear ankle joint diameter term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Aia10 Adjuvant induced arthritis QTL 10 IDA 3.41 RGD PMID:19526527 RGD:2316974 NCBI chr15:75,788,062...101,769,107 JBrowse link
Q Aia11 Adjuvant induced arthritis QTL 11 IDA 4.06 RGD PMID:19526527 RGD:2316974 NCBI chr17:60,781,426...86,533,673 JBrowse link
Q Aia12 Adjuvant induced arthritis QTL 12 IDA 4.24 RGD PMID:19526527 RGD:2316974 NCBI chr17:38,281,509...83,281,509 JBrowse link
Q Aia13 Adjuvant induced arthritis QTL 13 IDA 2.9 RGD PMID:19526527 RGD:2316974 NCBI chr 2:76,539,322...77,991,361 JBrowse link
Q Aia14 Adjuvant induced arthritis QTL 14 IDA 3.29 RGD PMID:19526527 RGD:2316974
Q Aia17 Adjuvant induced arthritis QTL 17 IDA 2.13 RGD PMID:19526527 RGD:2316974 NCBI chr 7:81,737,938...126,737,938 JBrowse link
Q Aia18 Adjuvant induced arthritis QTL 18 IDA 2.42 RGD PMID:19526527 RGD:2316974 NCBI chr 8:8,736,635...53,736,635 JBrowse link
Q Aia19 Adjuvant induced arthritis QTL 19 IDA 2.98 RGD PMID:19526527 RGD:2316974 NCBI chr10:66,978,955...107,211,142 JBrowse link
Q Aia21 Adjuvant induced arthritis QTL 21 IDA 2.75 RGD PMID:19526527 RGD:2316974 NCBI chr13:9,831,541...54,831,541 JBrowse link
Q Aia24 Adjuvant induced arthritis QTL 24 IDA 2.06 RGD PMID:19526527 RGD:2316974 NCBI chr15:52,847,908...73,690,657 JBrowse link
Q Aia7 Adjuvant induced arthritis QTL 7 IDA 3.82 RGD PMID:19526527 RGD:2316974 NCBI chr10:37,565,079...82,565,079 JBrowse link
Q Aia8 Adjuvant induced arthritis QTL 8 IDA 3.9700000286102295 RGD PMID:19526527 RGD:2316974 NCBI chr13:9,831,541...54,831,541 JBrowse link
Q Aia9 Adjuvant induced arthritis QTL 9 IDA 4.62 RGD PMID:19526527 RGD:2316974 NCBI chr13:11,766,535...32,331,607 JBrowse link
lumbar vertebra area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss119 Bone structure and strength QTL 119 IDA 4.0E-17 16.39 RGD PMID:26297441 RGD:11528619 NCBI chr12:20,873,419...21,346,740 JBrowse link
lumbar vertebra cortical cross-sectional area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss44 Bone structure and strength QTL 44 IDA 1.0E-4 10.97 RGD PMID:18158281 RGD:2293455 NCBI chr 2:43,162,366...148,478,373 JBrowse link
Q Bss45 Bone structure and strength QTL 45 IDA 1.0E-4 5.13 RGD PMID:18158281 RGD:2293455 NCBI chr16:37,752,156...82,752,156 JBrowse link
Q Bss46 Bone structure and strength QTL 46 IDA 1.0E-4 8.8 RGD PMID:18158281 RGD:2293455 NCBI chr18:11,791,518...63,636,873 JBrowse link
lumbar vertebra cross-sectional area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd2 Bone mineral density QTL 2 IDA 1.0E-4 13.4 L5 lumbar vertebra total cross-sectional area RGD PMID:16180139 RGD:1553896 NCBI chr 2:114,837,675...212,549,332 JBrowse link
Q Bss41 Bone structure and strength QTL 41 IDA 1.0E-4 9.38 RGD PMID:18158281 RGD:2293455 NCBI chr 1:171,629,477...216,629,477 JBrowse link
Q Bss42 Bone structure and strength QTL 42 IDA 1.0E-4 7.25 RGD PMID:18158281 RGD:2293455 NCBI chr 7:47,651,439...92,651,439 JBrowse link
Q Bss43 Bone structure and strength QTL 43 IDA 1.0E-4 5.33 RGD PMID:18158281 RGD:2293455 NCBI chr10:59,209,888...104,209,888 JBrowse link
lumbar vertebra trabecular cross-sectional area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss47 Bone structure and strength QTL 47 IDA 1.0E-4 7.25 RGD PMID:18158281 RGD:2293455 NCBI chr 1:171,629,477...216,629,477 JBrowse link
Q Bss48 Bone structure and strength QTL 48 IDA 1.0E-4 16.05 RGD PMID:18158281 RGD:2293455
Q Bss49 Bone structure and strength QTL 49 IDA 1.0E-4 5.61 RGD PMID:18158281 RGD:2293455 NCBI chr12:10,474,137...46,669,029 JBrowse link
Q Bss50 Bone structure and strength QTL 50 IDA 3.0E-4 4.64 RGD PMID:18158281 RGD:2293455 NCBI chr18:1...34,291,613 JBrowse link
right rear ankle joint diameter term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Aia15 Adjuvant induced arthritis QTL 15 IDA 2.46 RGD PMID:19526527 RGD:2316974 NCBI chr 7:17,004,598...62,004,598 JBrowse link
Q Aia16 Adjuvant induced arthritis QTL 16 IDA 2.71 RGD PMID:19526527 RGD:2316974 NCBI chr 7:59,238,038...104,238,038 JBrowse link
Q Aia20 Adjuvant induced arthritis QTL 20 IDA 3.38 RGD PMID:19526527 RGD:2316974 NCBI chr10:37,565,079...82,565,079 JBrowse link
Q Aia22 Adjuvant induced arthritis QTL 22 IDA 2.29 RGD PMID:19526527 RGD:2316974 NCBI chr13:1...34,266,636 JBrowse link
Q Aia25 Adjuvant induced arthritis QTL 25 IDA 2.69 RGD PMID:19526527 RGD:2316974 NCBI chr17:50,909,196...60,781,426 JBrowse link
Q Aia26 Adjuvant induced arthritis QTL 26 IDA 3.22 RGD PMID:19526527 RGD:2316974 NCBI chr17:38,281,509...83,281,509 JBrowse link
Q Aia27 Adjuvant induced arthritis QTL 27 IDA 2.83 RGD PMID:19526527 RGD:2316974 NCBI chr20:2,892,597...26,381,954 JBrowse link
Q Aia6 Adjuvant induced arthritis QTL 6 IDA 4.31 RGD PMID:19526527 RGD:2316974 NCBI chr10:66,978,955...107,211,142 JBrowse link
tibia area measurement term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss100 Bone structure and strength QTL 100 IDA 4.7 RGD PMID:21818327 RGD:5684953 NCBI chr 8:50,095,249...82,460,899 JBrowse link
Q Bss104 Bone structure and strength QTL 104 IDA 3.9 RGD PMID:21818327 RGD:5684953 NCBI chr  X:113,805,422...126,975,220 JBrowse link
Q Bss99 Bone structure and strength QTL 99 IDA 3.1 RGD PMID:21818327 RGD:5684953
tibia cortical bone volume term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss89 Bone structure and strength QTL 89 IDA 3.8 RGD PMID:20699128 RGD:4889918 NCBI chr 8:50,095,249...82,460,899 JBrowse link
Q Bss96 Bone structure and strength QTL 96 IDA 4.9 RGD PMID:20699128 RGD:4889918 NCBI chr 4:56,647,776...78,882,945 JBrowse link
tibia cortical bone volume to tibia total bone volume ratio term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss93 Bone structure and strength QTL 93 IDA 4.4 RGD PMID:20699128 RGD:4889918 NCBI chr17:27,027,949...60,463,643 JBrowse link
tibia length term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss51 Bone structure and strength QTL 51 IDA 1.0E-4 3.8 RGD PMID:19113924 RGD:2312767 NCBI chr 1:1...32,356,093 JBrowse link
Q Bss53 Bone structure and strength QTL 53 IDA 1.0E-4 4.3 RGD PMID:19113924 RGD:2312767 NCBI chr 1:43,284,731...118,944,897 JBrowse link
Q Bss60 Bone structure and strength QTL 60 IDA 1.0E-4 4.1 RGD PMID:19113924 RGD:2312767 NCBI chr 8:50,095,249...82,460,899 JBrowse link
Q Bss66 Bone structure and strength QTL 66 IDA 1.0E-4 3.4 RGD PMID:19113924 RGD:2312767 NCBI chr 1:11,481,312...82,174,945 JBrowse link
Q Lmblg1 Limb length QTL 1 IDA 6.4 RGD PMID:15452030 RGD:1302893 NCBI chr 1:151,162,512...201,278,233 JBrowse link
Q Lmblg2 Limb length QTL 2 IDA 6.0 RGD PMID:15452030 RGD:1302893 NCBI chr17:4,299,130...69,599,340 JBrowse link
Q Plsm3 Polydactyly-luxate syndrome (PLS) morphotypes QTL 3 IDA 3.0E-4 RGD PMID:8997636 RGD:632346 NCBI chr 7:1...34,000,259 JBrowse link
tibia midshaft cross-sectional area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss54 Bone structure and strength QTL 54 IDA 1.0E-4 3.5 RGD PMID:19113924 RGD:2312767
Q Bss55 Bone structure and strength QTL 55 IDA 1.0E-4 3.2 RGD PMID:19113924 RGD:2312767
Q Bss61 Bone structure and strength QTL 61 IDA 1.0E-4 0.9 RGD PMID:19113924 RGD:2312767 NCBI chr10:5,893,811...50,893,811 JBrowse link
Q Bss62 Bone structure and strength QTL 62 IDA 1.0E-4 1.5 RGD PMID:19113924 RGD:2312767 NCBI chr10:5,893,811...50,893,811 JBrowse link
Q Bss72 Bone structure and strength QTL 72 IDA 1.0E-4 2.6 RGD PMID:19113924 RGD:2312767 NCBI chr 3:47,904,172...70,710,963 JBrowse link
Q Bss73 Bone structure and strength QTL 73 IDA 1.5 RGD PMID:19113924 RGD:2312767 NCBI chr 3:47,904,172...70,710,963 JBrowse link
Q Bss76 Bone structure and strength QTL 76 IDA 1.0E-4 3.0 RGD PMID:19113924 RGD:2312767 NCBI chr 8:39,106,258...91,341,052 JBrowse link
Q Bss79 Bone structure and strength QTL 79 IDA 1.0E-4 1.8 RGD PMID:19113924 RGD:2312767 NCBI chr10:62,556,066...107,556,066 JBrowse link
Q Bss82 Bone structure and strength QTL 82 IDA 1.0E-4 3.0 RGD PMID:19113924 RGD:2312767 NCBI chr14:38,023,710...83,023,710 JBrowse link
tibia midshaft endosteal cross-sectional area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss56 Bone structure and strength QTL 56 IDA 1.0E-4 2.4 RGD PMID:19113924 RGD:2312767
Q Bss77 Bone structure and strength QTL 77 IDA 1.0E-4 3.1 RGD PMID:19113924 RGD:2312767 NCBI chr 8:39,106,258...91,341,052 JBrowse link
Q Bss80 Bone structure and strength QTL 80 IDA 1.0E-4 2.0 RGD PMID:19113924 RGD:2312767 NCBI chr10:62,556,066...107,556,066 JBrowse link
Q Bss83 Bone structure and strength QTL 83 IDA 1.0E-4 2.9 RGD PMID:19113924 RGD:2312767 NCBI chr14:38,023,710...83,023,710 JBrowse link
tibia midshaft total cross-sectional area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss59 Bone structure and strength QTL 59 IDA 1.0E-4 2.9 RGD PMID:19113924 RGD:2312767 NCBI chr 5:8,627,230...53,627,230 JBrowse link
Q Bss65 Bone structure and strength QTL 65 IDA 1.0E-4 3.9 RGD PMID:19113924 RGD:2312767 NCBI chr15:67,399,137...108,192,169 JBrowse link
Q Bss71 Bone structure and strength QTL 71 IDA 1.0E-4 2.6 RGD PMID:19113924 RGD:2312767
Q Bss85 Bone structure and strength QTL 85 IDA 1.0E-4 0.8 RGD PMID:19113924 RGD:2312767 NCBI chr18:15,226,101...42,690,662 JBrowse link
Q Bss86 Bone structure and strength QTL 86 IDA 4.1 RGD PMID:20699128 RGD:4889918 NCBI chr 1:46,302,615...91,302,615 JBrowse link
Q Bss91 Bone structure and strength QTL 91 IDA 4.0 RGD PMID:20699128 RGD:4889918 NCBI chr10:83,061,236...92,869,129 JBrowse link
tibia total bone volume term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss88 Bone structure and strength QTL 88 IDA 3.8 RGD PMID:20699128 RGD:4889918
Q Bss97 Bone structure and strength QTL 97 IDA 5.6 RGD PMID:20699128 RGD:4889918 NCBI chr 4:56,647,776...78,882,945 JBrowse link
tibia-fibula cortical bone endosteal cross-sectional area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss87 Bone structure and strength QTL 87 IDA 6.7 RGD PMID:20699128 RGD:4889918 NCBI chr 1:53,895,117...82,174,945 JBrowse link
Q Bss90 Bone structure and strength QTL 90 IDA 4.1 RGD PMID:20699128 RGD:4889918 NCBI chr 9:86,369,631...92,058,970 JBrowse link
Q Bss94 Bone structure and strength QTL 94 IDA 3.8 RGD PMID:20699128 RGD:4889918 NCBI chr 1:49,361,465...82,174,945 JBrowse link
tibia-fibula cortical bone total cross-sectional area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss92 Bone structure and strength QTL 92 IDA 3.9 RGD PMID:20699128 RGD:4889918 NCBI chr14:82,057,471...95,876,975 JBrowse link
tibia-fibula cross-sectional area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss95 Bone structure and strength QTL 95 IDA 4.4 RGD PMID:20699128 RGD:4889918 NCBI chr 3:1...36,847,613 JBrowse link
total volumetric bone mineral density term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd11 Bone mineral density QTL 11 IDA 11.0 RGD PMID:16461031 RGD:1578307 NCBI chr 4:90,850,165...135,850,165 JBrowse link
Q Bmd14 Bone mineral density QTL 14 IDA 3.8 RGD PMID:16461031 RGD:1578307 NCBI chr 6:11,735,669...72,593,685 JBrowse link
Q Bmd17 Bone mineral density QTL 17 IDA 4.0 RGD PMID:16461031 RGD:1578307 NCBI chr15:22,806,240...98,288,169 JBrowse link
Q Bmd19 Bone mineral density QTL 19 IDA 1.0E-4 10.7 RGD PMID:18282130 RGD:2293456 NCBI chr 2:43,162,366...111,362,592 JBrowse link
Q Bmd20 Bone mineral density QTL 20 IDA 2.0E-4 4.3 RGD PMID:18282130 RGD:2293456 NCBI chr 6:5,074,497...19,988,050 JBrowse link
Q Bmd21 Bone mineral density QTL 21 IDA 3.0E-4 4.2 RGD PMID:18282130 RGD:2293456 NCBI chr 7:47,651,439...92,651,439 JBrowse link
Q Bmd22 Bone mineral density QTL 22 IDA 1.0E-4 4.9 RGD PMID:18282130 RGD:2293456 NCBI chr10:49,444,551...81,709,989 JBrowse link
Q Bmd23 Bone mineral density QTL 23 IDA 1.0E-4 7.3 RGD PMID:18282130 RGD:2293456 NCBI chr18:51,464,733...63,636,873 JBrowse link
Q Bmd26 Bone mineral density QTL 26 IDA 2.0E-4 4.4 RGD PMID:18282130 RGD:2293456 NCBI chr12:15,872,653...32,974,238 JBrowse link
Q Bmd30 Bone mineral density QTL 30 IDA 1.0E-4 3.5 RGD PMID:18282130 RGD:2293456 NCBI chr10:49,444,551...81,709,989 JBrowse link
Q Bmd6 Bone mineral density QTL 6 IDA 12.2 femoral neck total volumetric bone mineral density RGD PMID:16461031 RGD:1578307 NCBI chr 1:509,108...43,284,926 JBrowse link
Q Bmd72 Bone mineral density QTL 72 IDA 1.0E-4 2.5 update to tibia metaphysis total BMD RGD PMID:19113924 RGD:2312767 NCBI chr 1:11,481,312...82,174,945 JBrowse link
Q Bmd74 Bone mineral density QTL 74 IDA 1.0E-4 4.0 update to tibia metaphysis total BMD RGD PMID:19113924 RGD:2312767 NCBI chr 1:82,174,743...118,944,897 JBrowse link
Q Bmd75 Bone mineral density QTL 75 IDA 1.0E-4 4.1 update to tibia metaphysis total BMD RGD PMID:19113924 RGD:2312767 NCBI chr 2:215,377,404...237,938,339 JBrowse link
Q Bmd76 Bone mineral density QTL 76 IDA 1.0E-4 3.6 update to tibia metaphysis total BMD RGD PMID:19113924 RGD:2312767 NCBI chr 3:27,494,621...50,302,886 JBrowse link
Q Bmd78 Bone mineral density QTL 78 IDA 1.0E-4 3.1 update to tibia metaphysis total BMD RGD PMID:19113924 RGD:2312767 NCBI chr 5:144,377,876...161,317,411 JBrowse link
Q Bmd79 Bone mineral density QTL 79 IDA 1.0E-4 2.3 update to tibia metaphysis total BMD RGD PMID:19113924 RGD:2312767 NCBI chr 7:94,811,085...116,738,842 JBrowse link
Q Bmd80 Bone mineral density QTL 80 IDA 1.0E-4 3.2 update to tibia metaphysis total BMD RGD PMID:19113924 RGD:2312767 NCBI chr10:19,606,483...64,606,483 JBrowse link
Q Bmd81 Bone mineral density QTL 81 IDA 4.3 RGD PMID:20699128 RGD:4889918 NCBI chr 3:38,710,365...50,302,886 JBrowse link
Q Bmd88 Bone mineral density QTL 88 IDA 4.0 update to femur specific term RGD PMID:18282130 RGD:2293456 NCBI chr 9:23,754,024...58,157,242 JBrowse link
Q Bmd9 Bone mineral QTL density 9 IDA 5.0 RGD PMID:16461031 RGD:1578307 NCBI chr 2:11,852,062...49,003,364 JBrowse link
trabecular volumetric bone mineral density term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd13 Bone mineral density QTL 13 IDA 4.9 RGD PMID:16461031 RGD:1578307 NCBI chr 5:103,689,353...148,689,353 JBrowse link
Q Bmd15 Bone mineral density QTL 15 IDA 5.2 femoral neck trabecular volumetric bone mineral density RGD PMID:16461031 RGD:1578307 NCBI chr 7:9,866,467...60,460,686 JBrowse link
Q Bmd18 Bone mineral density QTL 18 IDA 5.2 RGD PMID:16461031 RGD:1578307 NCBI chr15:22,806,240...98,288,169 JBrowse link
Q Bmd27 Bone mineral density QTL 27 IDA 1.0E-4 6.6 RGD PMID:18282130 RGD:2293456 NCBI chr 1:224,054,293...243,747,962 JBrowse link
Q Bmd28 Bone mineral density QTL 28 IDA 1.0E-4 5.1 RGD PMID:18282130 RGD:2293456 NCBI chr17:4,354,487...27,028,127 JBrowse link
Q Bmd8 Bone mineral density QTL 8 IDA 4.9 femoral neck trabecular volumetric bone mineral density RGD PMID:16461031 RGD:1578307 NCBI chr 1:49,393,172...94,393,172 JBrowse link
volumetric bone mineral density term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd1 Bone mineral density QTL 1 IDA 1.0E-4 12.2 femoral midshaft volumetric bone mineral density RGD PMID:16180139 RGD:1553896 NCBI chr 1:509,108...86,060,548 JBrowse link
Q Bmd3 Bone mineral density QTL 3 IDA 1.0E-4 7.9 distal femur total volumetric bone mineral density RGD PMID:16180139 RGD:1553896 NCBI chr 8:40,952,565...123,900,184 JBrowse link
Q Bmd4 Bone mineral density QTL 4 IDA 1.0E-4 9.4 femoral midshaft total volumetric bone mineral density RGD PMID:16180139 RGD:1553896 NCBI chr10:19,816,042...99,406,971 JBrowse link
Q Bmd41 Bone mineral density QTL 41 IDA 1.0E-4 8.9 RGD PMID:18707222 RGD:2300109 NCBI chr 1:171,629,477...216,629,477 JBrowse link
Q Bmd43 Bone mineral density QTL 43 IDA 1.0E-4 8.4 RGD PMID:18707222 RGD:2300109 NCBI chr 1:171,629,477...216,629,477 JBrowse link
Q Bmd44 Bone mineral density QTL 44 IDA 1.0E-4 5.4 RGD PMID:18707222 RGD:2300109 NCBI chr 1:56,949,932...101,949,932 JBrowse link
Q Bmd45 Bone mineral density QTL 45 IDA 1.0E-4 12.1 RGD PMID:18707222 RGD:2300109 NCBI chr 2:88,862,519...133,862,519 JBrowse link
Q Bmd46 Bone mineral density QTL 46 IDA 1.0E-4 8.4 RGD PMID:18707222 RGD:2300109 NCBI chr 2:88,862,519...133,862,519 JBrowse link
Q Bmd48 Bone mineral density QTL 48 IDA 1.0E-4 5.8 RGD PMID:18707222 RGD:2300109 NCBI chr 2:179,335,906...224,335,906 JBrowse link
Q Bmd5 Bone mineral density QTL 5 IDA 1.0E-4 12.1 lumbar vertebra 5 cortical volumetric bone mineral density RGD PMID:16180139 RGD:1553896
Q Bmd50 Bone mineral density QTL 50 IDA 1.0E-4 5.9 RGD PMID:18707222 RGD:2300109 NCBI chr 4:60,928,534...105,928,534 JBrowse link
Q Bmd52 Bone mineral density QTL 52 IDA 1.0E-4 11.2 RGD PMID:18707222 RGD:2300109 NCBI chr 6:1...27,574,569 JBrowse link
Q Bmd53 Bone mineral density QTL 53 IDA 1.0E-4 5.4 RGD PMID:18707222 RGD:2300109
Q Bmd54 Bone mineral density QTL 54 IDA 1.0E-4 5.3 RGD PMID:18707222 RGD:2300109 NCBI chr 7:47,651,439...92,651,439 JBrowse link
Q Bmd55 Bone mineral density QTL 55 IDA 1.0E-4 5.7 RGD PMID:18707222 RGD:2300109 NCBI chr 8:76,468,691...121,468,691 JBrowse link
Q Bmd56 Bone mineral density QTL 56 IDA 5.4 RGD PMID:18707222 RGD:2300109 NCBI chr 8:95,718,998...123,900,184 JBrowse link
Q Bmd57 Bone mineral density QTL 57 IDA 1.0E-4 9.8 RGD PMID:18707222 RGD:2300109 NCBI chr10:69,738,412...107,211,142 JBrowse link
Q Bmd58 Bone mineral density QTL 58 IDA 1.0E-4 4.9 RGD PMID:18707222 RGD:2300109 NCBI chr10:26,944,628...71,944,628 JBrowse link
Q Bmd59 Bone mineral density QTL 59 IDA 1.0E-4 7.1 RGD PMID:18707222 RGD:2300109 NCBI chr12:10,474,137...46,669,029 JBrowse link
Q Bmd60 Bone mineral density QTL 60 IDA 1.0E-4 5.7 RGD PMID:18707222 RGD:2300109 NCBI chr14:1...26,541,967 JBrowse link
Q Bmd61 Bone mineral density QTL 61 IDA 1.0E-4 5.3 RGD PMID:18707222 RGD:2300109 NCBI chr14:1...26,541,967 JBrowse link
Q Bmd62 Bone mineral density QTL 62 IDA 1.0E-4 12.8 RGD PMID:18707222 RGD:2300109 NCBI chr15:11,111,142...56,111,142 JBrowse link
Q Bmd63 Bone mineral density QTL 63 IDA 1.0E-4 5.9 RGD PMID:18707222 RGD:2300109 NCBI chr15:11,111,142...56,111,142 JBrowse link
Q Bmd64 Bone mineral density QTL 64 IDA 1.0E-4 5.3 RGD PMID:18707222 RGD:2300109 NCBI chr16:37,752,156...82,752,156 JBrowse link
Q Bmd65 Bone mineral density QTL 65 IDA 1.0E-4 19.7 RGD PMID:18707222 RGD:2300109 NCBI chr18:28,964,853...73,964,853 JBrowse link
Q Bmd66 Bone mineral density QTL 66 IDA 1.0E-4 13.1 RGD PMID:18707222 RGD:2300109 NCBI chr18:28,964,853...73,964,853 JBrowse link
Q Bmd68 Bone mineral density QTL 68 IDA 1.0E-4 6.4 RGD PMID:18707222 RGD:2300109 NCBI chr20:25,106,722...54,435,887 JBrowse link
Q Bmd92 Bone mineral density QTL 92 IDA 0.01 RGD PMID:27113531 RGD:11353859 NCBI chr 9:46,114,199...91,114,199 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  clinical measurement 2369
    body morphological measurement 733
      skeleton morphological measurement 201
        bone morphological measurement + 179
        joint morphological measurement + 22
        spinal column length + 0
        total skeletal weight + 0
Path 2
Term Annotations click to browse term
  clinical measurement 2369
    musculoskeletal system measurement 297
      skeletal system measurement 235
        skeleton morphological measurement 201
          bone morphological measurement + 179
          joint morphological measurement + 22
          spinal column length + 0
          total skeletal weight + 0
paths to the root