Pdgfrb (platelet derived growth factor receptor beta) - Rat Genome Database

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Gene: Pdgfrb (platelet derived growth factor receptor beta) Rattus norvegicus
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Symbol: Pdgfrb
Name: platelet derived growth factor receptor beta
RGD ID: 3285
Description: Enables phosphatidylinositol 3-kinase binding activity and platelet-derived growth factor receptor activity. Involved in several processes, including metanephros development; positive regulation of Rho protein signal transduction; and regulation of apoptotic process. Located in several cellular components, including apical plasma membrane; cell surface; and nucleus. Used to study extrahepatic cholestasis; middle cerebral artery infarction; and prostate cancer. Biomarker of hypertension; metabolic dysfunction-associated steatohepatitis; oligohydramnios; and sciatic neuropathy. Human ortholog(s) of this gene implicated in basal ganglia calcification; glioblastoma; infantile myofibromatosis; myeloproliferative neoplasm; and renal cell carcinoma. Orthologous to human PDGFRB (platelet derived growth factor receptor beta); PARTICIPATES IN platelet-derived growth factor signaling pathway; sphingosine 1-phosphate signaling pathway; calcium/calcium-mediated signaling pathway; INTERACTS WITH (+)-dihydromyricetin; (-)-epigallocatechin 3-gallate; (R,R,R)-alpha-tocopherol.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: beta platelet-derived growth factor receptor; beta-type platelet-derived growth factor receptor; CD140 antigen-like family member B; PDGF-R-beta; PDGFR-1; PDGFR-beta; platelet derived growth factor receptor, beta polypeptide; platelet-derived growth factor receptor 1; Platelet-derived growth factor receptor beta; platelet-derived growth factor receptor beta variant 1; Platelet-derived growth factor receptor, beta
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Candidate Gene For: Cia4
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81856,770,348 - 56,809,228 (+)NCBIGRCr8
mRatBN7.21854,499,962 - 54,538,840 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1854,499,964 - 54,538,843 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1856,587,978 - 56,626,738 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01857,302,576 - 57,341,334 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01855,123,817 - 55,162,705 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01856,364,586 - 56,406,381 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1856,364,620 - 56,406,381 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01855,596,682 - 55,637,692 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41857,014,475 - 57,053,581 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11857,086,706 - 57,125,813 (+)NCBI
Celera1852,652,411 - 52,691,218 (+)NCBICelera
Cytogenetic Map18q12.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


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Original Reference(s)
PdgfrbRatatherosclerosis treatmentISOPdgfrb (Mus musculus)10449506 RGD 
PdgfrbRatBrain Injuries  IEP 11084932mRNA:increased expression:cerebral cortex and hippocampusRGD 
PdgfrbRatbreast cancer  ISOPDGFRB (Homo sapiens)2292174protein:increased expression:breastRGD 
PdgfrbRatbreast carcinoma disease_progressionISOPDGFRB (Homo sapiens)2292178protein:increased expression:breastRGD 
PdgfrbRatBreast Neoplasms  ISOPdgfrb (Mus musculus)2292176 RGD 
PdgfrbRatCardiomegaly  IEP 2292215associated with Hypertension and protein:increased expression:heartRGD 
PdgfrbRatchoriocarcinoma  ISOPDGFRB (Homo sapiens)2292200mRNA:increased expression:mononuclear cytotrophoblast cellRGD 
PdgfrbRatChronic Allograft Nephropathy  IEP 11080974 RGD 
PdgfrbRatColonic Neoplasms  ISOPdgfrb (Mus musculus)2292176 RGD 
PdgfrbRatDiabetic Nephropathies  ISOPDGFRB (Homo sapiens)2311646associated with Diabetes Mellitus and Non-Insulin DependentRGD 
PdgfrbRatEndometrioid Carcinomas  ISOPDGFRB (Homo sapiens)2298578protein:increased expression:ovaryRGD 
PdgfrbRatExperimental Autoimmune Encephalomyelitis treatmentIDA 11080975 RGD 
PdgfrbRatExperimental Colitis treatmentIEP 11080973 RGD 
PdgfrbRatExperimental Diabetes Mellitus  IEP 2311654protein:increased expression:glomerulusRGD 
PdgfrbRatExperimental Liver Cirrhosis treatmentIMP 10449503 RGD 
PdgfrbRatExperimental Liver Cirrhosis  IMP 2292206 RGD 
PdgfrbRatextrahepatic cholestasis treatmentIMP 10449503 RGD 
PdgfrbRatglioblastoma treatmentISOPDGFRB (Homo sapiens)13702903 RGD 
PdgfrbRatHydatidiform Mole  ISOPDGFRB (Homo sapiens)2292200mRNA:increased expression:mononuclear cytotrophoblast cellRGD 
PdgfrbRatHyperoxia  IEP 1580851protein:increased expression:vascular associated smooth muscle cellRGD 
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Original Reference(s)
PdgfrbRatcerebral palsy  ISOPDGFRB (Homo sapiens)8554872ClinVar Annotator: match by term: Cerebral palsyClinVarPMID:24796542 more ...
PdgfrbRatDandy-Walker syndrome  ISOPDGFRB (Homo sapiens)8554872ClinVar Annotator: match by term: Dandy-Walker syndromeClinVarPMID:12181311 more ...
PdgfrbRatfamilial adenomatous polyposis 1  ISOPDGFRB (Homo sapiens)8554872ClinVar Annotator: match by term: Familial adenomatous polyposis 1ClinVarPMID:17963004 more ...
PdgfrbRatgenetic disease  ISOPDGFRB (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:12181311 more ...
PdgfrbRatHereditary Neoplastic Syndromes  ISOPDGFRB (Homo sapiens)8554872ClinVar Annotator: match by term: Hereditary cancer-predisposing syndromeClinVarPMID:17963004 more ...
PdgfrbRathydrocephalus  ISOPDGFRB (Homo sapiens)8554872ClinVar Annotator: match by term: HydrocephalusClinVarPMID:12181311 more ...
PdgfrbRatIdiopathic Basal Ganglia Calcification 1  ISOPDGFRB (Homo sapiens)8554872ClinVar Annotator: match by term: Basal ganglia calcification more ...ClinVarPMID:25741868 and PMID:28492532
PdgfrbRatIdiopathic Basal Ganglia Calcification 4  ISOPDGFRB (Homo sapiens)8554872ClinVar Annotator: match by term: Basal ganglia calcification more ...ClinVarPMID:12181311 more ...
PdgfrbRatinfantile myofibromatosis  ISOPDGFRB (Homo sapiens)8554872ClinVar more ...ClinVarPMID:12181311 more ...
PdgfrbRatInfantile Myofibromatosis 1  ISOPDGFRB (Homo sapiens)8554872ClinVar Annotator: match by term: Myofibromatosis more ...ClinVarPMID:12181311 more ...
PdgfrbRatKosaki Overgrowth Syndrome  ISOPDGFRB (Homo sapiens)8554872ClinVar more ...ClinVarPMID:12181311 more ...
PdgfrbRatmicrocephaly  ISOPDGFRB (Homo sapiens)8554872ClinVar Annotator: match by term: MicrocephalyClinVarPMID:25741868 and PMID:28492532
PdgfrbRatmyeloproliferative disorder with eosinophilia  ISOPDGFRB (Homo sapiens)8554872ClinVar more ...ClinVarPMID:25454926 more ...
PdgfrbRatNeurodevelopmental Disorders  ISOPDGFRB (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental disorderClinVarPMID:25741868
PdgfrbRatParkinsonism  ISOPDGFRB (Homo sapiens)8554872ClinVar Annotator: match by term: Parkinsonian disorderClinVarPMID:25741868
PdgfrbRatPenttinen-Aula Syndrome  ISOPDGFRB (Homo sapiens)8554872ClinVar Annotator: match by term: Premature aging syndrome and Penttinen typeClinVarPMID:12181311 more ...
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Original Reference(s)
PdgfrbRatbasal ganglia disease  ISOPDGFRB (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:25938945
PdgfrbRatcalcinosis  ISOPDGFRB (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:25938945
PdgfrbRatExperimental Liver Cirrhosis  ISOPDGFRB (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:15623374 and PMID:18466260
PdgfrbRatIdiopathic Basal Ganglia Calcification 1  ISOPDGFRB (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTD 
PdgfrbRatinfantile myofibromatosis  ISOPDGFRB (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTD 
PdgfrbRatPenttinen-Aula Syndrome  ISOPDGFRB (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTD 

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Original Reference(s)
PdgfrbRat(+)-dihydromyricetin multiple interactionsEXP 6480464ampelopsin analog inhibits the reaction [[PDGFB protein binds to PDGFB protein] which results in increased phosphorylation of PDGFRB protein]CTDPMID:21871475
PdgfrbRat(-)-epigallocatechin 3-gallate multiple interactionsEXP 6480464epigallocatechin gallate inhibits the reaction [Carbon Tetrachloride results in increased expression of PDGFRB mRNA] and epigallocatechin gallate inhibits the reaction [Carbon Tetrachloride results in increased expression of PDGFRB protein]CTDPMID:19646978
PdgfrbRat(-)-epigallocatechin 3-gallate multiple interactionsISOPDGFRB (Homo sapiens)6480464[potassium chromate(VI) co-treated with epigallocatechin gallate] results in decreased expression of PDGFRB mRNACTDPMID:22079256
PdgfrbRat(1->4)-beta-D-glucan multiple interactionsISOPdgfrb (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of PDGFRB mRNACTDPMID:36331819
PdgfrbRat(R,R,R)-alpha-tocopherol multiple interactionsEXP 6480464[alpha-Tocopherol co-treated with beta Carotene co-treated with Ascorbic Acid co-treated with Zinc co-treated with Sodium Selenite] results in decreased expression of PDGFRB mRNA and [alpha-Tocopherol co-treated with beta Carotene co-treated with Ascorbic Acid co-treated with Zinc co-treated with Sodium Selenite] results in decreased expression of PDGFRB proteinCTDPMID:23859036
PdgfrbRat(S)-nicotine multiple interactionsEXP 6480464Nicotine results in decreased phosphorylation of and results in decreased activity of PDGFRB proteinCTDPMID:20447445
PdgfrbRat(S)-nicotine increases expressionISOPDGFRB (Homo sapiens)6480464Nicotine results in increased expression of PDGFRB proteinCTDPMID:16149045
PdgfrbRat(S)-nicotine multiple interactionsISOPDGFRB (Homo sapiens)64804646 and 7-dimethoxy-2-phenylquinoxaline inhibits the reaction [Nicotine results in increased expression of PDGFRB protein]CTDPMID:16149045
PdgfrbRat1,8-cineole decreases expressionISOPDGFRB (Homo sapiens)6480464Eucalyptol results in decreased expression of PDGFRB mRNACTDPMID:36331666
PdgfrbRat1-naphthyl isothiocyanate multiple interactionsISOPDGFRB (Homo sapiens)6480464[1-Naphthylisothiocyanate co-treated with Cholic Acids] affects the expression of PDGFRB mRNACTDPMID:27344345
PdgfrbRat1-nitropyrene decreases expressionISOPDGFRB (Homo sapiens)64804641-nitropyrene results in decreased expression of PDGFRB mRNACTDPMID:19041380
PdgfrbRat17alpha-ethynylestradiol multiple interactionsISOPdgfrb (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of PDGFRB mRNACTDPMID:17942748
PdgfrbRat17alpha-ethynylestradiol decreases expressionEXP 6480464Ethinyl Estradiol results in decreased expression of PDGFRB mRNACTDPMID:17557909
PdgfrbRat17beta-estradiol multiple interactionsISOPDGFRB (Homo sapiens)6480464[Progesterone co-treated with Estradiol] results in increased expression of PDGFRB mRNACTDPMID:18692832
PdgfrbRat17beta-estradiol increases expressionISOPdgfrb (Mus musculus)6480464Estradiol results in increased expression of PDGFRB mRNACTDPMID:39298647
PdgfrbRat17beta-estradiol affects expressionEXP 6480464Estradiol affects the expression of PDGFRB mRNACTDPMID:32145629
PdgfrbRat2,2-(2-Chlorophenyl-4'-chlorophenyl)-1,1-dichloroethene multiple interactionsISOPDGFRB (Homo sapiens)6480464[Dichlorodiphenyldichloroethane co-treated with Dichlorodiphenyl Dichloroethylene co-treated with 2 more ...CTDPMID:19422813
PdgfrbRat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOPdgfrb (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of PDGFRB mRNA more ...CTDPMID:15034205 more ...
PdgfrbRat2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of PDGFRB mRNACTDPMID:34747641
PdgfrbRat2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOPdgfrb (Mus musculus)6480464Tetrachlorodibenzodioxin results in decreased expression of PDGFRB mRNACTDPMID:18691609 more ...

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Biological Process
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Original Reference(s)
PdgfrbRatadrenal gland development acts_upstream_of_or_withinISOPdgfrb (Mus musculus)1624291MGI:97530 PMID:19056881RGDPMID:19056881
PdgfrbRatangiogenesis involved_inIBAMGI:97531 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
PdgfrbRatanimal organ development involved_inIEAARBA:ARBA000292471600115GO_REF:0000117UniProtGO_REF:0000117
PdgfrbRataorta morphogenesis involved_inISOPdgfrb (Mus musculus)1624291UniProtKB:Q91ZX7 and PMID:19742316RGDPMID:19742316
PdgfrbRatblood vessel development involved_inISOPdgfrb (Mus musculus)1624291 PMID:10375497RGDPMID:10375497
PdgfrbRatcardiac myofibril assembly involved_inISOPdgfrb (Mus musculus)1624291UniProtKB:P26618 and PMID:11239463RGDPMID:11239463
PdgfrbRatcardiac myofibril assembly involved_inISSUniProtKB:P056221600115GO_REF:0000024UniProtGO_REF:0000024
PdgfrbRatcell chemotaxis involved_inISSUniProtKB:P096191600115GO_REF:0000024UniProtGO_REF:0000024
PdgfrbRatcell chemotaxis involved_inIBAMGI:97531 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
PdgfrbRatcell chemotaxis involved_inISOPDGFRB (Homo sapiens)1624291 PMID:17991872 and PMID:2554309RGDPMID:17991872 and PMID:2554309
PdgfrbRatcell chemotaxis involved_inIEAUniProtKB:P09619 and ensembl:ENSP000002617991600115GO_REF:0000107EnsemblGO_REF:0000107
PdgfrbRatcell migration involved in coronary angiogenesis involved_inISOPdgfrb (Mus musculus)1624291 PMID:14624252RGDPMID:14624252
PdgfrbRatcell migration involved in coronary angiogenesis involved_inISSUniProtKB:P056221600115GO_REF:0000024UniProtGO_REF:0000024
PdgfrbRatcell migration involved in vasculogenesis involved_inISSUniProtKB:P056221600115GO_REF:0000024UniProtGO_REF:0000024
PdgfrbRatcell migration involved in vasculogenesis involved_inISOPdgfrb (Mus musculus)1624291 PMID:14624252RGDPMID:14624252
PdgfrbRatcell surface receptor protein tyrosine kinase signaling pathway involved_inIEAInterPro:IPR0018241600115GO_REF:0000002InterProGO_REF:0000002
PdgfrbRatcell surface receptor protein tyrosine kinase signaling pathway involved_inIEAARBA:ARBA000290451600115GO_REF:0000117UniProtGO_REF:0000117
PdgfrbRatcell surface receptor protein tyrosine kinase signaling pathway involved_inIBAFB:FBgn0003366 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
PdgfrbRatcellular response to growth factor stimulus involved_inIEAARBA:ARBA000279761600115GO_REF:0000117UniProtGO_REF:0000117
PdgfrbRatcellular response to hydrogen peroxide acts_upstream_of_or_withinISOPdgfrb (Mus musculus)1624291 PMID:23651497RGDPMID:23651497
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Cellular Component
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PdgfrbRatapical plasma membrane located_inIDA 8554477PMID:10550325UniProt 
PdgfrbRatcell surface  IDA 1625382 RGD 
PdgfrbRatcell surface located_inISOPdgfrb (Mus musculus)1624291 PMID:24029230RGDPMID:24029230
PdgfrbRatcytoplasm located_inIDA 2311654PMID:10802145UniProt 
PdgfrbRatcytoplasm located_inISOPdgfrb (Mus musculus)1624291 PMID:22027834 and PMID:24029230RGDPMID:22027834 and PMID:24029230
PdgfrbRatcytoplasm located_inIDA 8554178PMID:11788434UniProt 
PdgfrbRatcytoplasmic vesicle located_inIEAUniProtKB-KW:KW-09681600115GO_REF:0000043UniProtGO_REF:0000043
PdgfrbRatGolgi apparatus located_inISOPDGFRB (Homo sapiens) and UniProtKB:P09619-11624291 RGDGO_REF:0000052
PdgfrbRatGolgi apparatus located_inIEAUniProtKB:P09619 and ensembl:ENSP000002617991600115GO_REF:0000107EnsemblGO_REF:0000107
PdgfrbRatintracellular membrane-bounded organelle located_inISOPDGFRB (Homo sapiens) and UniProtKB:P09619-11624291 RGDGO_REF:0000052
PdgfrbRatintracellular membrane-bounded organelle located_inIEAUniProtKB:P09619 and ensembl:ENSP000002617991600115GO_REF:0000107EnsemblGO_REF:0000107
PdgfrbRatlysosomal lumen located_inIEAUniProtKB-SubCell:SL-01561600115GO_REF:0000044UniProtGO_REF:0000044
PdgfrbRatlysosome located_inIEAUniProtKB-KW:KW-04581600115GO_REF:0000043UniProtGO_REF:0000043
PdgfrbRatmembrane located_inISSUniProtKB:P096191600115GO_REF:0000024UniProtGO_REF:0000024
PdgfrbRatmembrane located_inIEAUniProtKB:P09619 and ensembl:ENSP000002617991600115GO_REF:0000107EnsemblGO_REF:0000107
PdgfrbRatmembrane located_inIEAUniProtKB-KW:KW-04721600115GO_REF:0000043UniProtGO_REF:0000043
PdgfrbRatmembrane located_inIEAUniProtKB-SubCell:SL-01621600115GO_REF:0000044UniProtGO_REF:0000044
PdgfrbRatmembrane located_inISOPDGFRB (Homo sapiens)1624291 PMID:16477012RGDPMID:16477012
PdgfrbRatnucleus located_inIDA 8554178PMID:11788434UniProt 
PdgfrbRatplasma membrane located_inISOPDGFRB (Homo sapiens)1624291 PMID:2554309RGDPMID:2554309
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Molecular Function
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PdgfrbRatATP binding enablesIEAUniProtKB-KW:KW-00671600115GO_REF:0000043UniProtGO_REF:0000043
PdgfrbRatATP binding enablesIEAUniRule:UR0015033411600115GO_REF:0000104UniProtGO_REF:0000104
PdgfrbRatATP binding enablesIEAInterPro:IPR000719 more ...1600115GO_REF:0000002InterProGO_REF:0000002
PdgfrbRatenzyme binding enablesISOPDGFRB (Homo sapiens)1624291UniProtKB:O75460 and PMID:26315405RGDPMID:26315405
PdgfrbRatenzyme binding enablesIEAUniProtKB:P09619 and ensembl:ENSP000002617991600115GO_REF:0000107EnsemblGO_REF:0000107
PdgfrbRatGTPase activator activity enablesISSUniProtKB:P096191600115GO_REF:0000024UniProtGO_REF:0000024
PdgfrbRatGTPase activator activity enablesISOPDGFRB (Homo sapiens)1624291 PMID:1653029RGDPMID:1653029
PdgfrbRatGTPase activator activity enablesIEAUniProtKB:P09619 and ensembl:ENSP000002617991600115GO_REF:0000107EnsemblGO_REF:0000107
PdgfrbRatkinase activity enablesIEAUniProtKB-KW:KW-04181600115GO_REF:0000043UniProtGO_REF:0000043
PdgfrbRatkinase activity enablesISOPdgfrb (Mus musculus)1624291 PMID:12808090RGDPMID:12808090
PdgfrbRatmetal ion binding enablesIEAUniProtKB-KW:KW-04791600115GO_REF:0000043UniProtGO_REF:0000043
PdgfrbRatnucleotide binding enablesIEAUniRule:UR0015033411600115GO_REF:0000104UniProtGO_REF:0000104
PdgfrbRatnucleotide binding enablesIEAUniProtKB-KW:KW-05471600115GO_REF:0000043UniProtGO_REF:0000043
PdgfrbRatphosphatidylinositol 3-kinase binding  IPIPik3r1 (Rattus norvegicus)4108491 RGD 
PdgfrbRatphospholipase C activator activity enablesISSUniProtKB:P096191600115GO_REF:0000024UniProtGO_REF:0000024
PdgfrbRatphospholipase C activator activity enablesISOPDGFRB (Homo sapiens)1624291 PMID:1653029RGDPMID:1653029
PdgfrbRatphospholipase C activator activity enablesIEAUniProtKB:P09619 and ensembl:ENSP000002617991600115GO_REF:0000107EnsemblGO_REF:0000107
PdgfrbRatplatelet-derived growth factor beta-receptor activity enablesIEAUniProtKB:P09619 and ensembl:ENSP000002617991600115GO_REF:0000107EnsemblGO_REF:0000107
PdgfrbRatplatelet-derived growth factor beta-receptor activity enablesIBAPANTHER:PTN002814407 and UniProtKB:P096191600115GO_REF:0000033GO_CentralGO_REF:0000033
PdgfrbRatplatelet-derived growth factor beta-receptor activity enablesIEAInterPro:IPR0272881600115GO_REF:0000002InterProGO_REF:0000002
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Imported Annotations - KEGG (archival)

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PdgfrbRatcalcium/calcium-mediated signaling pathway   IEA 6907045 KEGGrno:04020
PdgfrbRatcytokine mediated signaling pathway  IEA 6907045 KEGGrno:04060
PdgfrbRatglioma pathway  IEA 6907045 KEGGrno:05214
PdgfrbRatmelanoma pathway  IEA 6907045 KEGGrno:05218
PdgfrbRatmitogen activated protein kinase signaling pathway   IEA 6907045 KEGGrno:04010
PdgfrbRatprostate cancer pathway   IEA 6907045 KEGGrno:05215

Imported Annotations - PID (archival)


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Reference Title
Reference Citation
1. Stimulated activation of platelet-derived growth factor receptor in vivo in balloon-injured arteries: a link between angiotensin II and intimal thickening. Abe J, etal., Circulation. 1997 Sep 16;96(6):1906-13.
2. High glucose-induced upregulation of Rho/Rho-kinase via platelet-derived growth factor receptor-beta increases migration of aortic smooth muscle cells. Akiyama N, etal., J Mol Cell Cardiol. 2008 Aug;45(2):326-32. doi: 10.1016/j.yjmcc.2008.04.006. Epub 2008 Apr 25.
3. Response to imatinib mesylate in patients with chronic myeloproliferative diseases with rearrangements of the platelet-derived growth factor receptor beta. Apperley JF, etal., N Engl J Med. 2002 Aug 15;347(7):481-7.
4. Platelet-derived growth factor receptor beta regulates migration and DNA synthesis in metanephric mesenchymal cells. Arar M, etal., J Biol Chem. 2000 Mar 31;275(13):9527-33.
5. Nilotinib-mediated mucosal healing in a rat model of colitis. Ataca P, etal., World J Gastroenterol. 2013 Oct 7;19(37):6237-44. doi: 10.3748/wjg.v19.i37.6237.
6. Expression of platelet-derived growth factor-A (PDGF-A), PDGF-B, and PDGF receptor-alpha and -beta during human testicular development and disease. Basciani S, etal., J Clin Endocrinol Metab. 2002 May;87(5):2310-9.
7. PDGF- and insulin/IGF-1-specific distinct modes of class IA PI 3-kinase activation in normal rat retinas and RGC-5 retinal ganglion cells. Biswas SK, etal., Invest Ophthalmol Vis Sci. 2008 Aug;49(8):3687-98. Epub 2008 Apr 17.
8. Dominant-negative soluble PDGF-beta receptor inhibits hepatic stellate cell activation and attenuates liver fibrosis. Borkham-Kamphorst E, etal., Lab Invest. 2004 Jun;84(6):766-77.
9. Expression patterns of PDGF-A, -B, -C and -D and the PDGF-receptors alpha and beta in activated rat hepatic stellate cells (HSC). Breitkopf K, etal., Cytokine. 2005 Sep 7;31(5):349-57.
10. Inhibition of receptor signaling and of glioblastoma-derived tumor growth by a novel PDGFRß aptamer. Camorani S, etal., Mol Ther. 2014 Apr;22(4):828-41. doi: 10.1038/mt.2013.300. Epub 2014 Jan 2.
11. PDGF-BB-mediated activation of p42(MAPK) is independent of PDGF beta-receptor tyrosine phosphorylation. Cartel NJ, etal., Am J Physiol Lung Cell Mol Physiol 2001 Oct;281(4):L786-98.
12. Platelet-derived growth factor-BB-mediated glycosaminoglycan synthesis is transduced through Akt. Cartel NJ, etal., Biochem J. 2002 Apr 1;363(Pt 1):19-28.
13. Oligohydramnios decreases platelet-derived growth factor expression in fetal rat lungs. Chen CM, etal., Neonatology. 2007;92(3):187-93. Epub 2007 May 21.
14. RNA interference targeting the platelet-derived growth factor receptor beta subunit ameliorates experimental hepatic fibrosis in rats. Chen SW, etal., Liver Int. 2008 Dec;28(10):1446-57. doi: 10.1111/j.1478-3231.2008.01759.x. Epub 2008 May 3.
15. Effects of ribozyme targeting platelet-derived growth factor receptor beta subunit gene on the proliferation and apoptosis of hepatic stellate cells in vitro. Chen YX, etal., Chin Med J (Engl). 2005 Jun 20;118(12):982-8.
16. c-Src couples PI 3 kinase/Akt and MAPK signaling to PDGF-induced DNA synthesis in mesangial cells. Choudhury GG, etal., Cell Signal. 2006 Nov;18(11):1854-64.
17. Temporal changes in gene expression following cryogenic rat brain injury. Cook JL, etal., Brain Res Mol Brain Res. 1998 Mar 30;55(1):9-19.
18. Quantitative trait loci disposing for both experimental arthritis and encephalomyelitis in the DA rat; impact on severity of myelin oligodendrocyte glycoprotein-induced experimental autoimmune encephalomyelitis and antibody isotype pattern. Dahlman I, etal., Eur J Immunol 1998 Jul;28(7):2188-96
19. Comparative transcriptional and functional profiling of clear cell and papillary renal cell carcinoma. Diegmann J, etal., Int J Mol Med. 2006 Sep;18(3):395-403.
20. A high-potassium diet reduces infarct size and improves vascular structure in hypertensive rats. Dorrance AM, etal., Am J Physiol Regul Integr Comp Physiol. 2007 Jan;292(1):R415-22. Epub 2006 Aug 17.
1 to 20 of 76 rows
PMID:1314164   PMID:1653029   PMID:2536956   PMID:2542288   PMID:2554309   PMID:2850496   PMID:7691811   PMID:9677323   PMID:9693135   PMID:10375497   PMID:10821867   PMID:11239463  
PMID:11264163   PMID:11346654   PMID:11940581   PMID:12808090   PMID:14624252   PMID:16456542   PMID:16477012   PMID:16479011   PMID:16569213   PMID:16971352   PMID:17143286   PMID:17335807  
PMID:17470632   PMID:17942966   PMID:17991872   PMID:18586678   PMID:19019919   PMID:19038866   PMID:19056881   PMID:19074160   PMID:19077273   PMID:19106110   PMID:19426150   PMID:19442606  
PMID:19494236   PMID:19691150   PMID:19742316   PMID:19946888   PMID:20036247   PMID:20686073   PMID:21423176   PMID:21679854   PMID:21929289   PMID:22027834   PMID:22166585   PMID:22272762  
PMID:22344297   PMID:22731705   PMID:22935817   PMID:23376485   PMID:23651497   PMID:23825366   PMID:23950935   PMID:24029230   PMID:24140598   PMID:24259663   PMID:24417820   PMID:24427322  
PMID:25159478   PMID:25380237   PMID:25866311   PMID:25882492   PMID:25899145   PMID:26315405   PMID:26437238   PMID:26599395   PMID:26896308   PMID:27038258   PMID:27379382   PMID:27400779  
PMID:28259995   PMID:28759157   PMID:28891521   PMID:32647179   PMID:33434537   PMID:33950542   PMID:34534604   PMID:35848503   PMID:36591929   PMID:37121121   PMID:38338969  



Pdgfrb
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81856,770,348 - 56,809,228 (+)NCBIGRCr8
mRatBN7.21854,499,962 - 54,538,840 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1854,499,964 - 54,538,843 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1856,587,978 - 56,626,738 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01857,302,576 - 57,341,334 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01855,123,817 - 55,162,705 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01856,364,586 - 56,406,381 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1856,364,620 - 56,406,381 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01855,596,682 - 55,637,692 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41857,014,475 - 57,053,581 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11857,086,706 - 57,125,813 (+)NCBI
Celera1852,652,411 - 52,691,218 (+)NCBICelera
Cytogenetic Map18q12.1NCBI
PDGFRB
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385150,113,839 - 150,155,845 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5150,113,839 - 150,155,872 (-)EnsemblGRCh38hg38GRCh38
GRCh375149,493,402 - 149,535,408 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365149,473,595 - 149,515,615 (-)NCBINCBI36Build 36hg18NCBI36
Build 345149,473,595 - 149,515,503NCBI
Celera5145,574,776 - 145,616,798 (-)NCBICelera
Cytogenetic Map5q32NCBI
HuRef5144,641,381 - 144,683,476 (-)NCBIHuRef
CHM1_15148,925,983 - 148,968,003 (-)NCBICHM1_1
T2T-CHM13v2.05150,650,431 - 150,692,448 (-)NCBIT2T-CHM13v2.0
Pdgfrb
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391861,178,194 - 61,218,139 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1861,178,222 - 61,218,133 (+)EnsemblGRCm39 Ensembl
GRCm381861,045,127 - 61,085,067 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1861,045,150 - 61,085,061 (+)EnsemblGRCm38mm10GRCm38
MGSCv371861,204,804 - 61,244,721 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361861,170,810 - 61,210,428 (+)NCBIMGSCv36mm8
Celera1862,332,161 - 62,372,066 (+)NCBICelera
Cytogenetic Map18E1NCBI
cM Map1834.41NCBI
Pdgfrb
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554154,365,743 - 4,403,587 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554154,365,848 - 4,403,317 (+)NCBIChiLan1.0ChiLan1.0
PDGFRB
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24145,342,640 - 145,388,629 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15143,482,189 - 143,524,580 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05145,538,330 - 145,580,312 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15151,543,581 - 151,585,630 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5151,543,891 - 151,585,530 (-)Ensemblpanpan1.1panPan2
PDGFRB
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1458,925,922 - 58,963,639 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl458,926,351 - 58,962,283 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha458,692,327 - 58,728,259 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0459,406,388 - 59,444,135 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl459,406,430 - 59,444,130 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1459,195,608 - 59,231,543 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0459,310,188 - 59,346,130 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0459,841,270 - 59,877,207 (+)NCBIUU_Cfam_GSD_1.0
Pdgfrb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213143,188,255 - 143,225,815 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365044,762,184 - 4,799,829 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365044,762,251 - 4,799,789 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PDGFRB
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2151,155,756 - 151,192,647 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12151,155,753 - 151,192,818 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22158,113,430 - 158,121,798 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PDGFRB
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12352,724,061 - 52,766,264 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2352,724,005 - 52,766,234 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603424,950,813 - 24,993,042 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pdgfrb
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247749,432,541 - 9,469,881 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247749,432,765 - 9,469,690 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Pdgfrb
230 total Variants

Predicted Target Of
Summary Value
Count of predictions:233
Count of miRNA genes:153
Interacting mature miRNAs:187
Transcripts:ENSRNOT00000068535
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 62 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1331733Bp233Blood pressure QTL 2333.97196arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182479697779788953Rat
1358358Sradr6Stress Responsive Adrenal Weight QTL 62.49adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)181194429959330563Rat
1331730Scl27Serum cholesterol level QTL 273.826blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)185229287559796643Rat
1331741Bp232Blood pressure QTL 2323.59112arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)182137289383213037Rat
1331742Bp228Blood pressure QTL 2283.88752arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940859796643Rat
1331736Bp227Blood pressure QTL 2272.791arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)184671876359796643Rat
1300125Rf26Renal function QTL 263.2urine potassium amount (VT:0010539)urine potassium excretion rate (CMO:0000761)185253986365844950Rat
6893683Bw110Body weight QTL 1102.70.002body mass (VT:0001259)body weight (CMO:0000012)184334502283828827Rat
1331727Bp237Blood pressure QTL 2373.053arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940861698465Rat
9589041Epfw12Epididymal fat weight QTL 1217.080.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)184664067583828827Rat

1 to 10 of 62 rows
D18Wox25  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21854,498,329 - 54,498,481 (+)MAPPERmRatBN7.2
Rnor_6.01856,363,005 - 56,363,156NCBIRnor6.0
Rnor_5.01855,595,086 - 55,595,237UniSTSRnor5.0
RGSC_v3.41857,012,803 - 57,012,954UniSTSRGSC3.4
Celera1852,650,739 - 52,650,890UniSTS
Cytogenetic Map18q12.1UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000068535   ⟹   ENSRNOP00000060534
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1854,515,659 - 54,538,843 (+)Ensembl
Rnor_6.0 Ensembl1856,364,620 - 56,406,343 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000078764   ⟹   ENSRNOP00000070561
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1854,500,218 - 54,538,838 (+)Ensembl
Rnor_6.0 Ensembl1856,379,890 - 56,404,671 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000086033   ⟹   ENSRNOP00000069485
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1854,499,964 - 54,538,838 (+)Ensembl
Rnor_6.0 Ensembl1856,364,677 - 56,406,381 (+)Ensembl
RefSeq Acc Id: NM_031525   ⟹   NP_113713
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81856,770,348 - 56,809,228 (+)NCBI
mRatBN7.21854,499,962 - 54,538,838 (+)NCBI
Rnor_6.01856,364,677 - 56,406,381 (+)NCBI
Rnor_5.01855,596,682 - 55,637,692 (+)NCBI
RGSC_v3.41857,014,475 - 57,053,581 (+)RGD
Celera1852,652,411 - 52,691,218 (+)RGD
Sequence:
RefSeq Acc Id: XM_039096573   ⟹   XP_038952501
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81856,776,593 - 56,809,228 (+)NCBI
mRatBN7.21854,506,207 - 54,538,840 (+)NCBI
RefSeq Acc Id: XM_063277094   ⟹   XP_063133164
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81856,789,933 - 56,809,228 (+)NCBI
1 to 11 of 11 rows
Protein RefSeqs NP_113713 (Get FASTA)   NCBI Sequence Viewer  
  XP_038952501 (Get FASTA)   NCBI Sequence Viewer  
  XP_063133164 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAK43716 (Get FASTA)   NCBI Sequence Viewer  
  AAM09098 (Get FASTA)   NCBI Sequence Viewer  
  ABJ53143 (Get FASTA)   NCBI Sequence Viewer  
  CAA78489 (Get FASTA)   NCBI Sequence Viewer  
  EDM14586 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000060534
  ENSRNOP00000069485
GenBank Protein Q05030 (Get FASTA)   NCBI Sequence Viewer  
1 to 11 of 11 rows
RefSeq Acc Id: NP_113713   ⟸   NM_031525
- Peptide Label: precursor
- UniProtKB: Q8R406 (UniProtKB/Swiss-Prot),   Q925F7 (UniProtKB/Swiss-Prot),   Q05030 (UniProtKB/Swiss-Prot),   A6IXF6 (UniProtKB/TrEMBL),   A0A8L2R1W6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000060534   ⟸   ENSRNOT00000068535
Ensembl Acc Id: ENSRNOP00000070561   ⟸   ENSRNOT00000078764
Ensembl Acc Id: ENSRNOP00000069485   ⟸   ENSRNOT00000086033
RefSeq Acc Id: XP_038952501   ⟸   XM_039096573
- Peptide Label: isoform X1
- UniProtKB: Q8R406 (UniProtKB/Swiss-Prot),   Q05030 (UniProtKB/Swiss-Prot),   Q925F7 (UniProtKB/Swiss-Prot),   A6IXF6 (UniProtKB/TrEMBL),   A0A8L2R1W6 (UniProtKB/TrEMBL)
Ig-like   Ig-like C2-type   Protein kinase

Name Modeler Protein Id AA Range Protein Structure
AF-Q05030-F1-model_v2 AlphaFold Q05030 1-1097 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13700815
Promoter ID:EPDNEW_R11335
Type:initiation region
Name:Pdgfrb_2
Description:platelet derived growth factor receptor beta
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R11336  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01856,364,670 - 56,364,730EPDNEW
RGD ID:13700812
Promoter ID:EPDNEW_R11336
Type:initiation region
Name:Pdgfrb_1
Description:platelet derived growth factor receptor beta
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R11335  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01856,364,898 - 56,364,958EPDNEW


1 to 40 of 54 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-7348 BioCyc
Ensembl Genes ENSRNOG00000018461 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000068535 ENTREZGENE
  ENSRNOT00000086033 ENTREZGENE
Gene3D-CATH 2.60.40.10 UniProtKB/Swiss-Prot
  Phosphorylase Kinase, domain 1 UniProtKB/Swiss-Prot
  Transferase(Phosphotransferase) domain 1 UniProtKB/Swiss-Prot
InterPro Ig-like_dom UniProtKB/Swiss-Prot
  Ig-like_dom_sf UniProtKB/Swiss-Prot
  Ig-like_fold UniProtKB/Swiss-Prot
  Ig_sub UniProtKB/Swiss-Prot
  Ig_sub2 UniProtKB/Swiss-Prot
  Immunoglobulin UniProtKB/Swiss-Prot
  Kinase-like_dom_sf UniProtKB/Swiss-Prot
  PGFRB UniProtKB/Swiss-Prot
  Prot_kinase_dom UniProtKB/Swiss-Prot
  Protein_kinase_ATP_BS UniProtKB/Swiss-Prot
  RTK UniProtKB/Swiss-Prot
  Ser-Thr/Tyr_kinase_cat_dom UniProtKB/Swiss-Prot
  Tyr_kinase_AS UniProtKB/Swiss-Prot
  Tyr_kinase_cat_dom UniProtKB/Swiss-Prot
  Tyr_kinase_rcpt_3_CS UniProtKB/Swiss-Prot
KEGG Report rno:24629 UniProtKB/Swiss-Prot
NCBI Gene 24629 ENTREZGENE
PANTHER PLATELET-DERIVED GROWTH FACTOR RECEPTOR BETA UniProtKB/Swiss-Prot
  TYROSINE-PROTEIN KINASE RECEPTOR UniProtKB/Swiss-Prot
Pfam Ig_3 UniProtKB/Swiss-Prot
  PF00047 UniProtKB/Swiss-Prot
  Pkinase_Tyr UniProtKB/Swiss-Prot
PharmGKB PDGFRB RGD
PhenoGen Pdgfrb PhenoGen
PIRSF Beta-PDGF_receptor UniProtKB/Swiss-Prot
  TyrPK_CSF1-R UniProtKB/Swiss-Prot
PRINTS VEGFRECEPTOR UniProtKB/Swiss-Prot
PROSITE IG_LIKE UniProtKB/Swiss-Prot
  PROTEIN_KINASE_ATP UniProtKB/Swiss-Prot
  PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot
  PROTEIN_KINASE_TYR UniProtKB/Swiss-Prot
  RECEPTOR_TYR_KIN_III UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000018461 RatGTEx
1 to 40 of 54 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-01-25 Pdgfrb  platelet derived growth factor receptor beta  Pdgfrb  platelet derived growth factor receptor, beta polypeptide  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2002-06-10 Pdgfrb  Platelet-derived growth factor receptor, beta      Symbol and Name status set to approved 70586 APPROVED

Note Type Note Reference
gene_function ligand-activated tyrosine kinase 628442
gene_process autophosphorylates and binds to downstream proteins linking cell surface message to the nucleus, required for the activation of mitogen-activated protein kinases when mediated by platelet-derived growht factor -BB but not required during tyrosine phosphor 628442