Fecq4_m QTL Report (Mus musculus) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
QTL Registration

QTL: Fecq4_m (fecundity QTL 4 (mouse)) Mus musculus

Symbol: Fecq4_m
Name: fecundity QTL 4 (mouse)
RGD ID: 4141754
Trait: Not determined
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm39947,543,024 - 57,805,204MOUSEQTLGRCm39
GRCm38947,631,726 - 57,897,921MOUSEQTLGRCm38
MGSCv37947,439,809 - 57,745,728 (+)MOUSEQTLGRCm37
cM Map925.91MOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Mouse Genome Database (MGD) Mouse Genome Database (MGD)
2. Mouse MP Annotation Import Pipeline RGD automated import pipeline
Additional References at PubMed
PMID:16547111  


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1322221Cadm1cell adhesion molecule 194744146847773578Mouse
401712591LOC131375741STARR-seq mESC enhancer starr_2405394769980047700944Mouse
401700632LOC131375742STARR-seq mESC enhancer starr_2405494770342947704967Mouse
1624748Gm10677predicted gene 1067794771045847729506Mouse
401707665LOC131375743STARR-seq mESC enhancer starr_2405694777441147776217Mouse
9593251Gm32016predicted gene, 3201694785071447863187Mouse
401711565LOC131375744STARR-seq mESC enhancer starr_2405794799313447994664Mouse
401715919LOC131375745STARR-seq mESC enhancer starr_2405894804290448044716Mouse
10038590Gm40518predicted gene, 4051894804404648070046Mouse
1620555Nxpe4neurexophilin and PC-esterase domain family, member 494807330248311325Mouse
39130612Gm57543predicted gene, 5754394809962548099767Mouse
401841900LOC132440568STARR-positive B cell enhancer mm9_chr9:48025608-4802590994812882548129126Mouse
15020147Gm51672predicted gene, 5167294817745048195309Mouse
401710960LOC131375746STARR-seq mESC enhancer starr_2406594821417048216918Mouse
1622202Nxpe2neurexophilin and PC-esterase domain family, member 294822930348264749Mouse
9644624Gm32131predicted gene, 3213194832943248331954Mouse
1618596Nxpe1-psneurexophilin and PC-esterase domain family, member 1, pseudogene94833134648343240Mouse
1621887Gm5616predicted gene 561694836159148362846Mouse
10013865Gm39335predicted gene, 3933594836359648376144Mouse
2302548Gm8884predicted gene 888494836564448366027Mouse
10011823Gm39334predicted gene, 3933494837071948372554Mouse
1620676Rexo2RNA exonuclease 294837981248391911Mouse
401704669LOC131375747STARR-seq mESC enhancer starr_2406894838533848387084Mouse
401840220LOC132440569STARR-positive B cell enhancer ABC_E382694839184648392147Mouse
1317543Rbm7RNA binding motif protein 794839999748406630Mouse
401835610LOC132440570STARR-positive B cell enhancer ABC_E975994840651848406818Mouse
1621886Gm5617predicted gene 561794840664348407275Mouse
401714017LOC131375748STARR-seq mESC enhancer starr_2406994843656048437459Mouse
1320035Nnmtnicotinamide N-methyltransferase94844890548518958Mouse
401834258LOC132440571STARR-positive B cell enhancer ABC_E506794846995548470256Mouse
401702795LOC131375749STARR-seq mESC enhancer starr_2407194850758048509674Mouse
401708780LOC131375750STARR-seq mESC enhancer starr_2407294854028148542954Mouse
39128409Gm53521predicted gene, 5352194855652848561069Mouse
163708210LOC128926124CapStarr-seq enhancer MGSCv37_chr9:48458381-4845856494856157648561759Mouse
1313496Zbtb16zinc finger and BTB domain containing 1694856309748747525Mouse
9640537Gm32280predicted gene, 3228094858138348585989Mouse
401713975LOC131375751STARR-seq mESC enhancer starr_2407694862428448625609Mouse
401702660LOC131375752STARR-seq mESC enhancer starr_2407894875699348758335Mouse
401707147LOC131375753STARR-seq mESC enhancer starr_2408094880069648801759Mouse
9609661Gm32335predicted gene, 3233594880753048818954Mouse
10749Htr3a5-hydroxytryptamine (serotonin) receptor 3A94881051348822451Mouse
401707516LOC131375754STARR-seq mESC enhancer starr_2408194883407048835303Mouse
62111Htr3b5-hydroxytryptamine (serotonin) receptor 3B94884630848876290Mouse
15021443Gm51673predicted gene, 5167394888581848896463Mouse
401839907LOC132440572STARR-positive B cell enhancer ABC_E673094889636348896664Mouse
1323076Usp28ubiquitin specific peptidase 2894889657748953817Mouse
401703639LOC131375755STARR-seq mESC enhancer starr_2408294890174148903940Mouse
39129565Gm53522predicted gene, 5352294890442748911320Mouse
2294969Cldn25claudin 2594895885748959642Mouse
401709279LOC131375756STARR-seq mESC enhancer starr_2408594896496848967901Mouse
1551187Zw10zw10 kinetochore protein94896688048990075Mouse
732837Tmprss5transmembrane protease, serine 5 (spinesin)94901399449028891Mouse
401703964LOC131375757STARR-seq mESC enhancer starr_2408694902128949023620Mouse
401707532LOC131375758STARR-seq mESC enhancer starr_2408794907535649077168Mouse
401712672LOC131375759STARR-seq mESC enhancer starr_2408894908679349087307Mouse
401709138LOC131375760STARR-seq mESC enhancer starr_2408994909028749091827Mouse
1623774Gm4894predicted gene 489494916183149191894Mouse
10486Drd2dopamine receptor D294925170349319468Mouse
401712177LOC131375761STARR-seq mESC enhancer starr_2409094927650749278110Mouse
401708365LOC131375762STARR-seq mESC enhancer starr_2409194929602649296949Mouse
12794188Gm46111predicted gene, 4611194931570849322216Mouse
1620554Ankk1ankyrin repeat and kinase domain containing 194932649449338341Mouse
1332282Ttc12tetratricopeptide repeat domain 1294934826149397572Mouse
401701744LOC131375763STARR-seq mESC enhancer starr_2409294939410149395493Mouse
163709779LOC128926125CapStarr-seq enhancer MGSCv37_chr9:49297299-4929750094940049449400695Mouse
163662910LOC128926126CapStarr-seq enhancer MGSCv37_chr9:49297697-4929780694940089249401001Mouse
736988Ncam1neural cell adhesion molecule 194941343449710909Mouse
1624913Gm11149predicted gene 1114994942958849479325Mouse
401713502LOC131375764STARR-seq mESC enhancer starr_2409694966206749664884Mouse
401702679LOC131375765STARR-seq mESC enhancer starr_2409794970703549708945Mouse
14996769Gm25633predicted gene, 2563394973716949737275Mouse
401705132LOC131375766STARR-seq mESC enhancer starr_2409894974049149741494Mouse
401703543LOC131375767STARR-seq mESC enhancer starr_2410194984570949848166Mouse
401709501LOC131375768STARR-seq mESC enhancer starr_2410294987259049874531Mouse
401710687LOC131375769STARR-seq mESC enhancer starr_2410394988303249885659Mouse
401715243LOC131375770STARR-seq mESC enhancer starr_2410494988622149887421Mouse
401708906LOC131375771STARR-seq mESC enhancer starr_2410594991680449917824Mouse
401712493LOC131375772STARR-seq mESC enhancer starr_2410795002999950031659Mouse
401717514LOC131375773STARR-seq mESC enhancer starr_2410895003504950036547Mouse
39129496Gm57549predicted gene, 5754995007971550079857Mouse
1615240Gm8907predicted gene 890795009714350098363Mouse
2309946Gm4042predicted gene 404295012638850127014Mouse
16122762310003N18RikRIKEN cDNA 2310003N18 gene95014382350144482Mouse
401702891LOC131375774STARR-seq mESC enhancer starr_2410995019412950196194Mouse
10012583Gm39336predicted gene, 3933695020963350213179Mouse
2294381Rpl10-ps3ribosomal protein L10, pseudogene 395025552650256284Mouse
10032025Gm38579predicted gene, 3857995030213950303688Mouse
163682924LOC128926127STARR-seq mESC enhancer starr_2411095032767450328932Mouse
401716407LOC131375775STARR-seq mESC enhancer starr_2411195036096650362388Mouse
163675427LOC128926128CapStarr-seq enhancer MGSCv37_chr9:50260567-5026085495036376250364049Mouse
9654736Gm32462predicted gene, 3246295038346450397400Mouse
2310737Gm9557predicted gene 955795039566850397149Mouse
1610392Plet1osplacenta expressed transcript 1, opposite strand95040009950416105Mouse
401707130LOC131375776STARR-seq mESC enhancer starr_2411295040197450402704Mouse
1615026Plet1placenta expressed transcript 195040582550416939Mouse
68526Pts6-pyruvoyl-tetrahydropterin synthase95043291750440017Mouse
1319132Bco2beta-carotene oxygenase 295044438750466513Mouse
163690842LOC128926129CapStarr-seq enhancer MGSCv37_chr9:50341457-5034156695044465250444761Mouse
730895Il18interleukin 1895046600050493141Mouse
1621545Tex12testis expressed 1295046844850472568Mouse
1332252Sdhdsuccinate dehydrogenase complex, subunit D, integral membrane protein95050764050515149Mouse
1332009Timm8btranslocase of inner mitochondrial membrane 8B95051522750516620Mouse
1615585Nkapd1NKAP domain containing 195051654250528567Mouse
163670720LOC128926130CapStarr-seq enhancer MGSCv37_chr9:50425377-5042548695052857250528681Mouse
1321443Pih1d2PIH1 domain containing 295052862150536300Mouse
401703037LOC131375777STARR-seq mESC enhancer starr_2411395053878950539679Mouse
735274Dlatdihydrolipoamide S-acetyltransferase95054593350571080Mouse
1617970Dixdc1DIX domain containing 195057405250650900Mouse
401708832LOC131375778STARR-seq mESC enhancer starr_2411595059257350594169Mouse
10022750Gm39337predicted gene, 3933795060853050628313Mouse
15017712Gm51674predicted gene, 5167495061015350617970Mouse
401702870LOC131375779STARR-seq mESC enhancer starr_2411695063197450633358Mouse
401709969LOC131375780STARR-seq mESC enhancer starr_2411795063837250640039Mouse
13324122310030G06RikRIKEN cDNA 2310030G06 gene95065099150657827Mouse
401701641LOC131375781STARR-seq mESC enhancer starr_2412195065353950655223Mouse
10400Cryabcrystallin, alpha B95065725150667936Mouse
731773Hspb2heat shock protein 295066237250663654Mouse
1558373Cfap68cilia and flagella associated protein 6895067267450679536Mouse
401838412LOC132440573STARR-positive B cell enhancer ABC_E382895067936550679666Mouse
1614016Fdxacb1ferredoxin-fold anticodon binding domain containing 195067953850683981Mouse
401832701LOC132440574STARR-positive B cell enhancer ABC_E976095068523050685530Mouse
1322641Alg9ALG9 alpha-1,2-mannosyltransferase95068657050754939Mouse
39130014Gm57547predicted gene, 5754795071534350715482Mouse
401702851LOC131375782STARR-seq mESC enhancer starr_2412295076514250767419Mouse
1552002Ppp2r1bprotein phosphatase 2, regulatory subunit A, beta95076794650810625Mouse
401840081LOC132440575STARR-positive B cell enhancer mm9_chr9:50664895-5066519595076809050768390Mouse
14997551Gm25558predicted gene, 2555895079925250799355Mouse
1558433Sik2salt inducible kinase 295080094450920432Mouse
401701572LOC131375783STARR-seq mESC enhancer starr_2412395089184150894196Mouse
401702088LOC131375784STARR-seq mESC enhancer starr_2412495089745350898679Mouse
401842154LOC132440576STARR-positive B cell enhancer ABC_E829095091819050918491Mouse
9657945Gm32681predicted gene, 3268195095478950980531Mouse
1620553Laynlayilin95096632350988501Mouse
1623773HoatzHOATZ cilia and flagella associated protein95099261051017183Mouse
1318794Btg4BTG anti-proliferation factor 495101348651031224Mouse
1607590Mir34cmicroRNA 34c95101433451014410Mouse
1608205Mir34bmicroRNA 34b95101486251014945Mouse
401713601LOC131375785STARR-seq mESC enhancer starr_2412595101681651017937Mouse
9670386Gm32742predicted gene, 3274295104339651080124Mouse
401838137LOC132440577STARR-positive B cell enhancer ABC_E1054495107310251073402Mouse
163707226LOC128926131CapStarr-seq enhancer MGSCv37_chr9:50973591-5097387995107678651077074Mouse
401712726LOC131375786STARR-seq mESC enhancer starr_2412695108645851088624Mouse
401840309LOC132440578STARR-positive B cell enhancer ABC_E673195112245951122760Mouse
401833417LOC132440579STARR-positive B cell enhancer ABC_E1054595112430751124607Mouse
1323348Pou2af1POU domain, class 2, associating factor 195112499051151379Mouse
401837437LOC132440580STARR-positive B cell enhancer ABC_E673295113685851137159Mouse
401714870LOC131375787STARR-seq mESC enhancer starr_2412795116440051165371Mouse
9673151Gm32819predicted gene, 3281995117875751211721Mouse
1615584Pou2af3POU class 2 homeobox associating factor 395118155851189865Mouse
1616765Pou2af2POU domain, class 2, associating factor 295120098651240224Mouse
10036611Gm39338predicted gene, 3933895122433651282935Mouse
401705306LOC131375788STARR-seq mESC enhancer starr_2412895128309651284626Mouse
163711475LOC128926132CapStarr-seq enhancer MGSCv37_chr9:51209953-5121027895131314851313473Mouse
401704347LOC131375789STARR-seq mESC enhancer starr_2412995135671551357792Mouse
401703380LOC131375790STARR-seq mESC enhancer starr_2413095137542751376849Mouse
2299025Gm7293predicted gene 729395153402651535252Mouse
2295275Gm8959predicted gene 895995156816351568848Mouse
401711055LOC131375791STARR-seq mESC enhancer starr_2413195158021951581283Mouse
401833698LOC132440581STARR-positive B cell enhancer mm9_chr9:51513381-5151368295161657651616877Mouse
10022653Gm40520predicted gene, 4052095166392451676605Mouse
1550452Arhgap20Rho GTPase activating protein 2095167665151765158Mouse
1614746Arhgap20osRho GTPase activating protein 20, opposite strand95175079351787185Mouse
163649798LOC128926133CapStarr-seq enhancer MGSCv37_chr9:51654007-5165422295175720251757417Mouse
163652992LOC128926134CapStarr-seq enhancer MGSCv37_chr9:51674851-5167505295177804651778247Mouse
11081674Gm6980predicted gene 698095182477651835943Mouse
16074364933407I05RikRIKEN cDNA 4933407I05 gene95182572951838303Mouse
62328Fdx1ferredoxin 195185432351874902Mouse
401705725LOC131375792STARR-seq mESC enhancer starr_2413395188997351891153Mouse
1621059Gm6981predicted pseudogene 698195191336151960005Mouse
1553217Rdxradixin95195845052000038Mouse
9590984Gm33614predicted gene, 3361495198951451989983Mouse
1620552Zc3h12czinc finger CCCH type containing 12C95202086952080028Mouse
9656638Mir6244microRNA 624495202692352027039Mouse
401837510LOC132440582STARR-positive B cell enhancer ABC_E382995219871652199017Mouse
15003167Gm25562predicted gene, 2556295220249952202631Mouse
401839654LOC132440583STARR-positive B cell enhancer mm9_chr9:52157388-5215768895226058352260883Mouse
401711472LOC131375793STARR-seq mESC enhancer starr_2413595229571152297253Mouse
9654360Gm33125predicted gene, 3312595233487052340463Mouse
9674380Gm33210predicted gene, 3321095244126752485884Mouse
401714579LOC131375794STARR-seq mESC enhancer starr_2413795253383252535302Mouse
1617969AI593442expressed sequence AI59344295258433252593434Mouse
1614015Gm1715predicted gene 171595259116352710072Mouse
401716097LOC131375795STARR-seq mESC enhancer starr_2413895259666952598520Mouse
39131193Gm53523predicted gene, 5352395269399152698561Mouse
401716590LOC131375796STARR-seq mESC enhancer starr_2413995271331652715818Mouse
10014555Gm39339predicted gene, 3933995277087252789138Mouse
1617452Ddx10DEAD box helicase 1095300975453159423Mouse
401838296LOC132440584STARR-positive B cell enhancer ABC_E178695315933153159632Mouse
401716966LOC131375797STARR-seq mESC enhancer starr_2414095316895753169563Mouse
1558064Exph5exophilin 595321281453292466Mouse
401713983LOC131375798STARR-seq mESC enhancer starr_2414195325582353257850Mouse
1618366Poglut3protein O-glucosyltransferase 395329421753313167Mouse
9663124Mir130cmicroRNA 130c95331210553312186Mouse
13325044930550C14RikRIKEN cDNA 4930550C14 gene95331381453345726Mouse
163657218LOC128926135CapStarr-seq enhancer MGSCv37_chr9:53213128-5321331195331632353316506Mouse
10199Atmataxia telangiectasia mutated95334842253448125Mouse
163656263LOC128926136CapStarr-seq enhancer MGSCv37_chr9:53344652-5334489795344784753448251Mouse
1323668Npatnuclear protein in the AT region95344834753486867Mouse
401710931LOC131375799STARR-seq mESC enhancer starr_2414695348086453482312Mouse
10060Acat1acetyl-Coenzyme A acetyltransferase 195349182253521650Mouse
401837203LOC132440585STARR-positive B cell enhancer ABC_E138495352156553521866Mouse
733948Cul5cullin 595352588153578807Mouse
14997044Gm22304predicted gene, 2230495355127753551405Mouse
9674389Gm16124predicted gene 1612495357839353592630Mouse
401837036LOC132440586STARR-positive B cell enhancer ABC_E1054695358491353585213Mouse
401706822LOC131375800STARR-seq mESC enhancer starr_2414795358797653588892Mouse
1322662Rab39RAB39, member RAS oncogene family95359541053617532Mouse
1621885Rps6-ps3ribosomal protein S6, pseudogene 395360079553601621Mouse
401827251n-R5s85nuclear encoded rRNA 5S 8595361110653611229Mouse
401834697LOC132440587STARR-positive B cell enhancer ABC_E111495361751953617820Mouse
401708650LOC131375801STARR-seq mESC enhancer starr_2415095366192453664909Mouse
1322596Slc35f2solute carrier family 35, member F295367873353725445Mouse
1313125Slnsarcolipin95375753553761133Mouse
401702029LOC131375802STARR-seq mESC enhancer starr_2415695378774153790154Mouse
1621884Gm16380predicted pseudogene 1638095379130353791841Mouse
401710364LOC131375803STARR-seq mESC enhancer starr_2415795380162353803933Mouse
10017514Gm39340predicted gene, 3934095380679753808203Mouse
1615583Elmod1ELMO/CED-12 domain containing 195381874153882628Mouse
401709404LOC131375804STARR-seq mESC enhancer starr_2415995389925353900794Mouse
1620551Tnfaip8l3tumor necrosis factor, alpha-induced protein 8-like 395393289053975695Mouse
401704621LOC131375805STARR-seq mESC enhancer starr_2416195400531354006784Mouse
39131134Gm57545predicted gene, 5754595406408654064227Mouse
401706796LOC131375806STARR-seq mESC enhancer starr_2416395406694254068850Mouse
737520Cyp19a1cytochrome P450, family 19, subfamily a, polypeptide 195407322154175448Mouse
39130969LOC110386946Cyp19a1 promoter I.f95413613654137851Mouse
15021809Gm51676predicted gene, 5167695417091054176596Mouse
5685545Gldnosgliomedin, opposite strand95417586454208854Mouse
15017590Gm51675predicted gene, 5167595417670854177023Mouse
1332161Gldngliomedin95419377054249061Mouse
401702766LOC131375807STARR-seq mESC enhancer starr_2416795426387854265133Mouse
1623772Dmxl2Dmx-like 295427244254409150Mouse
401706690LOC131375808STARR-seq mESC enhancer starr_2416895428252854284054Mouse
401715372LOC131375809STARR-seq mESC enhancer starr_2416995435503554355937Mouse
1320320Sh2d7SH2 domain containing 795444140754452314Mouse
1318656Cib2calcium and integrin binding family member 295445207454467512Mouse
401841981LOC132440588STARR-positive B cell enhancer ABC_E88895449343154493732Mouse
733178Idh3aisocitrate dehydrogenase 3 (NAD+) alpha95449379554511946Mouse
401703196LOC131375810STARR-seq mESC enhancer starr_2417195450032754501920Mouse
1557638Acsbg1acyl-CoA synthetase bubblegum family member 195451216354569169Mouse
15017149Gm51677predicted gene, 5167795455239354553193Mouse
10007506Gm39341predicted gene, 3934195457163254584486Mouse
1619446Gm7368predicted gene 736895459742254598990Mouse
12795099Gm46113predicted gene, 4611395460392954605981Mouse
1320704Dnaja4DnaJ heat shock protein family (Hsp40) member A495460613254623601Mouse
9634851Mir5710microRNA 571095461559754615665Mouse
1551430Skic8SKI8 subunit of superkiller complex95462443754641833Mouse
401837945LOC132440589STARR-positive B cell enhancer ABC_E383095464170754642008Mouse
1557239Crabp1cellular retinoic acid binding protein I95467203254680394Mouse
401705163LOC131375811STARR-seq mESC enhancer starr_2417395470146554702918Mouse
401715556LOC131375812STARR-seq mESC enhancer starr_2417495470797654711229Mouse
1615170Rab7-ps1RAB7, member RAS oncogene family, pseudogene 195473174454732646Mouse
401715439LOC131375813STARR-seq mESC enhancer starr_2417795474712954747989Mouse
401714009LOC131375814STARR-seq mESC enhancer starr_2417995476271354765231Mouse
736754Ireb2iron responsive element binding protein 295476994254819812Mouse
401842256LOC132440590STARR-positive B cell enhancer ABC_E229295477081554771116Mouse
401840627LOC132440591STARR-positive B cell enhancer ABC_E178795482426654824567Mouse
1318590Hykkhydroxylysine kinase 195482457454857208Mouse
1615622AY074887cDNA sequence AY07488795485752854858238Mouse
401841117LOC132440592STARR-positive B cell enhancer ABC_E673495485786654858167Mouse
62138Psma4proteasome subunit alpha 495485807454865316Mouse
737575Chrna5cholinergic receptor, nicotinic, alpha polypeptide 595488811254918704Mouse
732614Chrna3cholinergic receptor, nicotinic, alpha polypeptide 395491740154933846Mouse
732765Chrnb4cholinergic receptor, nicotinic, beta polypeptide 495493543854956236Mouse
401710086LOC131375815STARR-seq mESC enhancer starr_2418295500041255003588Mouse
2311023Gm7395predicted gene 739595500161355002654Mouse
401702486LOC131375816STARR-seq mESC enhancer starr_2418395501032155010732Mouse
401710641LOC131375817STARR-seq mESC enhancer starr_2418495501355555014971Mouse
401707826LOC131375818STARR-seq mESC enhancer starr_2418595502092855023506Mouse
1614226Ube2q2ubiquitin-conjugating enzyme E2Q family member 295505660255114813Mouse
1315407Fbxo22F-box protein 2295511621955131717Mouse
401702036LOC131375819STARR-seq mESC enhancer starr_2418695512248755125371Mouse
1618260Nrg4neuregulin 495512750655190937Mouse
5147020Gm15625predicted gene 1562595521257255213667Mouse
1620550Tmem266transmembrane protein 26695523419455345629Mouse
401839070LOC132440593STARR-positive B cell enhancer ABC_E976295523451955234819Mouse
401708682LOC131375820STARR-seq mESC enhancer starr_2418995534916455351027Mouse
39129215LOC114827926VISTA enhancer mm175495535620955358345Mouse
735340Etfaelectron transferring flavoprotein, alpha polypeptide95536172055419528Mouse
401704018LOC131375821STARR-seq mESC enhancer starr_2419095537406955375535Mouse
401840019LOC132440594STARR-positive B cell enhancer ABC_E1140695541934855419648Mouse
401704599LOC131375822STARR-seq mESC enhancer starr_2419195542511255426641Mouse
2294844Gm5917predicted gene 591795542586655426573Mouse
732663Isl2insulin related protein 2 (islet 2)95544596155454951Mouse
1317268ScaperS phase cyclin A-associated protein in the ER95545716355845505Mouse
15002802Gm23407predicted gene, 2340795546290655462996Mouse
401714100LOC131375823STARR-seq mESC enhancer starr_2419295546376755465357Mouse
5143464Gm18102predicted gene, 1810295553193255532551Mouse
401705594LOC131375824STARR-seq mESC enhancer starr_2419395554480155545864Mouse
10007647Gm39342predicted gene, 3934295560500155628437Mouse
401835017LOC132440595STARR-positive B cell enhancer mm9_chr9:55546201-5554650295560567855605979Mouse
401708285LOC131375825STARR-seq mESC enhancer starr_2419595580771355808729Mouse
401832500LOC132440596STARR-positive B cell enhancer ABC_E673595584545655845757Mouse
401707820LOC131375826STARR-seq mESC enhancer starr_2419795584750355849133Mouse
2295889Gm7435predicted gene 743595585723855859704Mouse
16150354930563M21RikRIKEN cDNA 4930563M21 gene95586987155917848Mouse
2310946Gm7439predicted gene 743995592860055929658Mouse
2295826Gm7444predicted gene 744495593492055938857Mouse
401706506LOC131375827STARR-seq mESC enhancer starr_2419895594730455948374Mouse
401838232LOC132440597STARR-positive B cell enhancer mm9_chr9:55889495-5588979695594897255949273Mouse
735471Rcn2reticulocalbin 295594912955966367Mouse
401833026LOC132440598STARR-positive B cell enhancer mm9_chr9:55923089-5592339095598256655982867Mouse
1316822Pstpip1proline-serine-threonine phosphatase-interacting protein 195598572956036174Mouse
163698329LOC128926137CapStarr-seq enhancer MGSCv37_chr9:55937639-5593782695599711655997303Mouse
163706358LOC128926138CapStarr-seq enhancer MGSCv37_chr9:55938770-5593892395599824755998400Mouse
401833236LOC132440599STARR-positive B cell enhancer ABC_E1054795601161456011914Mouse
401709348LOC131375828STARR-seq mESC enhancer starr_2420295601465356015155Mouse
1551242Tspan3tetraspanin 395604316856068354Mouse
163675473LOC128926139CapStarr-seq enhancer MGSCv37_chr9:55994441-5599459495605391856054071Mouse
401840476LOC132440600STARR-positive B cell enhancer ABC_E673795606821156068512Mouse
1323794Peak1pseudopodium-enriched atypical kinase 195610841056325972Mouse
9655731Peak1ospseudopodium-enriched atypical kinase 1, opposite strand95614862856232426Mouse
401837039LOC132440601STARR-positive B cell enhancer mm9_chr9:56112222-5611252395617169956172000Mouse
401707334LOC131375829STARR-seq mESC enhancer starr_2420395624101356242810Mouse
401704908LOC131375830STARR-seq mESC enhancer starr_2420495624536956246378Mouse
401834077LOC132440602STARR-positive B cell enhancer ABC_E138595632529556325596Mouse
163691992LOC128926140CapStarr-seq enhancer MGSCv37_chr9:56266337-5626649095632581456325967Mouse
1620035Hmg20ahigh mobility group 20A95632589156404220Mouse
163671621LOC128926141CapStarr-seq enhancer MGSCv37_chr9:56266643-5626696295632612056326484Mouse
2299790Ube2srtubiquitin-conjugating enzyme E2S, retrotransposed95634472356345710Mouse
163684868LOC128926142CapStarr-seq enhancer MGSCv37_chr9:56313127-5631335095637260456372827Mouse
401716188LOC131375831STARR-seq mESC enhancer starr_2420595640493956405416Mouse
39129301Gm53524predicted gene, 5352495640888856414777Mouse
163694213LOC128926143CapStarr-seq enhancer MGSCv37_chr9:56354440-5635462795641391756414104Mouse
401702291LOC131375832STARR-seq mESC enhancer starr_2420895644128456443279Mouse
401715613LOC131375833STARR-seq mESC enhancer starr_2421095645401356455717Mouse
9642826Gm31529predicted gene, 3152995647954556487481Mouse
9594581Gm26868predicted gene, 2686895651393956521757Mouse
1318575Lingo1leucine rich repeat and Ig domain containing 195652574356704355Mouse
401839035LOC132440603STARR-positive B cell enhancer mm9_chr9:56484136-5648443795654361356543914Mouse
9604856Gm31642predicted gene, 3164295655821356581584Mouse
401715253LOC131375834STARR-seq mESC enhancer starr_2421195655841156561259Mouse
39130483Gm53525predicted gene, 5352595661990056626714Mouse
9642062Gm31586predicted gene, 3158695670427656705691Mouse
1614770Cimap1cciliary microtubule associated protein 1C95675594056779199Mouse
730839Cspg4chondroitin sulfate proteoglycan 495677238856807154Mouse
1550252Snx33sorting nexin 3395682447256835726Mouse
401842222LOC132440604STARR-positive B cell enhancer ABC_E1054895683525256835552Mouse
163705711LOC128926144CapStarr-seq enhancer MGSCv37_chr9:56776219-5677632895683569656835805Mouse
5139095Gm19936predicted gene, 1993695683847256841216Mouse
401838557LOC132440605STARR-positive B cell enhancer ABC_E138695684458456844885Mouse
1550494Imp3IMP3, U3 small nucleolar ribonucleoprotein95684478456845682Mouse
401838467LOC132440606STARR-positive B cell enhancer ABC_E383195685476556855066Mouse
1615903Snupnsnurportin 195685515856893545Mouse
163708023LOC128926145CapStarr-seq enhancer MGSCv37_chr9:56798396-5679865495685787356858322Mouse
1550433Ptpn9protein tyrosine phosphatase, non-receptor type 995690225256970092Mouse
401716872LOC131375835STARR-seq mESC enhancer starr_2421595691671456918104Mouse
1624622Gm10658predicted gene 1065895696418156979250Mouse
401833922LOC132440607STARR-positive B cell enhancer ABC_E506995697908456979385Mouse
1323141Sin3atranscriptional regulator, SIN3A (yeast)95697927157035652Mouse
163688868LOC128926146STARR-seq mESC enhancer starr_2421795697942656981671Mouse
401841035LOC132440608STARR-positive B cell enhancer ABC_E932995698245856982758Mouse
16087442700012I20RikRIKEN cDNA 2700012I20 gene95698248756983333Mouse
401833822LOC132440609STARR-positive B cell enhancer ABC_E71195698322056983521Mouse
1613466Man2c1osmannosidase, alpha, class 2C, member 1, opposite strand95703726657038574Mouse
163711050LOC128926147CapStarr-seq enhancer MGSCv37_chr9:56978348-5697853195703782557038008Mouse
736490Man2c1mannosidase, alpha, class 2C, member 195703795357049497Mouse
401835871LOC132440610STARR-positive B cell enhancer ABC_E383295703845557038756Mouse
1314486Neil1nei endonuclease VIII-like 1 (E. coli)95705007257055973Mouse
163674026LOC128926148CapStarr-seq enhancer MGSCv37_chr9:56995851-5699603495705532857055511Mouse
401833028LOC132440611STARR-positive B cell enhancer ABC_E507095705562157055922Mouse
1314526Commd4COMM domain containing 495706231957065633Mouse
163661555LOC128926149CapStarr-seq enhancer MGSCv37_chr9:57006119-5700622895706537557065705Mouse
16158941700041C23RikRIKEN cDNA 1700041C23 gene95708255957093392Mouse
401712529LOC131375836STARR-seq mESC enhancer starr_2421995710486457106406Mouse
12794511Gm46115predicted gene, 4611595710957357110479Mouse
401708057LOC131375837STARR-seq mESC enhancer starr_2422095711066857111692Mouse
401837312LOC132440612STARR-positive B cell enhancer ABC_E1140795711670057117000Mouse
1617137Trcg1taste receptor cell gene 195714383957157147Mouse
13135061700017B05RikRIKEN cDNA 1700017B05 gene95715960557169882Mouse
401840847LOC132440613STARR-positive B cell enhancer ABC_E89095718144257181743Mouse
163662717LOC128926150CapStarr-seq enhancer MGSCv37_chr9:57126080-5712618995718555657185892Mouse
401709177LOC131375838STARR-seq mESC enhancer starr_2422395719671957197842Mouse
10007591Gm39343predicted gene, 3934395721685057238245Mouse
401710507LOC131375839STARR-seq mESC enhancer starr_2422595721775457218942Mouse
401708779LOC131375840STARR-seq mESC enhancer starr_2422695722199957226908Mouse
401711120LOC131375841STARR-seq mESC enhancer starr_2422795722811257229245Mouse
5142553Gm18996predicted gene, 1899695723594457236718Mouse
1617968Gm5121predicted gene 512195724135557242075Mouse
401716207LOC131375842STARR-seq mESC enhancer starr_2422895724450157245887Mouse
401715490LOC131375843STARR-seq mESC enhancer starr_2422995726124057262783Mouse
1550663Ppcdcphosphopantothenoylcysteine decarboxylase95729237857347440Mouse
16092314930430J02RikRIKEN cDNA 4930430J02 gene95729835357307647Mouse
163649196LOC128926151CapStarr-seq enhancer MGSCv37_chr9:57269067-5726926895732854357328880Mouse
401703844LOC131375844STARR-seq mESC enhancer starr_2423095733435357337068Mouse
163686508LOC128926152CapStarr-seq enhancer MGSCv37_chr9:57287043-5728715295734651957346628Mouse
401839661LOC132440614STARR-positive B cell enhancer ABC_E1055095734728657347586Mouse
68504Scamp5secretory carrier membrane protein 595734861057375343Mouse
401710732LOC131375845STARR-seq mESC enhancer starr_2423595738398757386633Mouse
401703764LOC131375846STARR-seq mESC enhancer starr_2423695738696057389309Mouse
1618399D9Wsu149DNA segment, Chr 9, Wayne State University 14995739024557391022Mouse
2294757Gm6166predicted gene 616695739119757391874Mouse
5143461Gm18103predicted gene, 1810395739189857392585Mouse
15021428Gm51707predicted gene, 5170795739291857396028Mouse
401702167LOC131375847STARR-seq mESC enhancer starr_2423795740196357403057Mouse
1313232Rpp25ribonuclease P/MRP 25 subunit95741138557412730Mouse
401708941LOC131375848STARR-seq mESC enhancer starr_2423995741608757418444Mouse
732302Cox5acytochrome c oxidase subunit 5A95742301257439710Mouse
401836416LOC132440615STARR-positive B cell enhancer ABC_E1140895743106057431360Mouse
1321801Fam219bfamily with sequence similarity 219, member B95744364857450471Mouse
10915Mpimannose phosphate isomerase95744874457460095Mouse
401840422LOC132440616STARR-positive B cell enhancer ABC_E383495746805657468357Mouse
68491Scamp2secretory carrier membrane protein 295746822757496081Mouse
401835376LOC132440617STARR-positive B cell enhancer ABC_E383595746837857468679Mouse
1557888Ulk3unc-51-like kinase 395749642357503516Mouse
1622942Cplx3complexin 395750727557513564Mouse
9604940Gm32392predicted gene, 3239295751368557524447Mouse
1622941Lman1llectin, mannose-binding 1 like95751408057528057Mouse
1318781Cskc-src tyrosine kinase95753392957560758Mouse
163688543LOC128926153STARR-positive B cell enhancer ABC_E976395754780557548105Mouse
163671126LOC128926154CapStarr-seq enhancer MGSCv37_chr9:57498764-5749896595755824057558441Mouse
10438Cyp1a2cytochrome P450, family 1, subfamily a, polypeptide 295758422057590938Mouse
39130534LOC110467530Cyp1a2 5' enhancer95759520557595362Mouse
10436Cyp1a1cytochrome P450, family 1, subfamily a, polypeptide 195759521157611107Mouse
39130197LOC110467519Cyp1a1 5' regulatory region95760325557604956Mouse
1315775Edc3enhancer of mRNA decapping 395761582357659782Mouse
1553651Clk3CDC-like kinase 395765790457672397Mouse
401841457LOC132440618STARR-positive B cell enhancer ABC_E1140995766978257670082Mouse
9642840Gm32510predicted gene, 3251095767326457680438Mouse
243048410LOC128981861CapStarr-seq enhancers MGSCv37_chr9:57617333-57617516 and MGSCv37_chr9:57617555-5761784695767680957677345Mouse
1314898Arid3bAT-rich interaction domain 3B95769763657744130Mouse
401701341LOC131375849STARR-seq mESC enhancer starr_2424795773692857739679Mouse
401833406LOC132440619STARR-positive B cell enhancer ABC_E288995774224957742550Mouse
401836504LOC132440620STARR-positive B cell enhancer ABC_E674195774410557744406Mouse
2295658Gm7547predicted gene 754795774514657745617Mouse
401713373LOC131375850STARR-seq mESC enhancer starr_2424895774741257749391Mouse
2310478Gm9715predicted gene 971595775363357754506Mouse
401708855LOC131375851STARR-seq mESC enhancer starr_2424995775989457761739Mouse

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11354951Pdcc3_mplasmacytoid dentritic cell compartment 3 (mouse)91574962749749627Mouse
10043847Hdlq89_mHDL QTL 89 (mouse)Not determined92929292963293072Mouse
13515057Adip20b_madiposity 20b (mouse)94870090853791702Mouse
1301549Bbaa9_mB.burgdorferi-associated arthritis 9 (mouse)Not determined95780504771481754Mouse
4141447Cfmq2_mcystic fibrosis modifier QTL 2 (mouse)Not determined91541175149411890Mouse
10043867Mtbcq9_mmultiple trait body composition QTL 9 (mouse)Not determined92679642160796552Mouse
12790990Tgl7_mtriglyceride 7 (mouse)95455996088559960Mouse
12790993Adq1_maortic diameter QTL 1 (mouse)91574962749749627Mouse
1357465Vtbt6_mvertebral trabecular bone trait 6 (mouse)Not determined91697884050978943Mouse
1301702Brm1_mbrachyury modifier 1 (mouse)Not determined94080504774805204Mouse
11532696Sluc39c_msusceptibility to lung cancer 39c (mouse)92558748559587581Mouse
1301421Lgth4_mbody length 4 (mouse)Not determined91541175149411890Mouse
1301252Etohc3_methanol consumption 3 (mouse)Not determined93503447869034599Mouse
12790992Arlsq1_maortic root lesion size QTL 1 (mouse)93809957572099575Mouse
4141071Ath29_matherosclerosis 29 (mouse)Not determined94041959474607925Mouse
1301287Feml2_mfemur length in high growth mice 2 (mouse)Not determined95750728363207282Mouse
1301365Ap5q_malcohol preference 5 QTL (mouse)Not determined93005316464053277Mouse
10045613Rapop7_mradiation-induced apoptosis 6 (mouse)Not determined93673624349420511Mouse
4141754Fecq4_mfecundity QTL 4 (mouse)Not determined94754302457805204Mouse
1357709Si5lq3_mserum IGFBP-5 level QTL 3 (mouse)Not determined93311102567111140Mouse
1558993Tdmq1_mtype 2 diabetes modifying QTL 1 (mouse)Not determined94041959451808670Mouse
13525008Hrtiq1_mheart rate time index, QTL 1 (mouse)95242609868556008Mouse
13504834Hdlq109_mHDL QTL 109 (mouse)91670964150709641Mouse
1301051Eae9_msusceptibility to experimental allergic encephalomyelitis 9 (mouse)Not determined94942029863239852Mouse
13208563Bmiq8_mbody mass index QTL 8 (mouse)92491129668907282Mouse
4142042Alpq3_malcohol preference QTL 3 (mouse)Not determined93730619798701707Mouse
11532712Sluc39d_msusceptibility to lung cancer 39d (mouse)92558748559587581Mouse
1300716Cd4ts4_mCD4 T cell subset 4 (mouse)Not determined94883105682831177Mouse
4141676Neogq1_mneonatal growth QTL 1 (mouse)Not determined95780504786121973Mouse
12880415V125Dq7_mvitamin D active form serum level QTL 7 (mouse)91601129650011296Mouse
1357746Vtbt7_mvertebral trabecular bone trait 7 (mouse)Not determined93073991564740021Mouse
1301049El4_mepilepsy 4 (mouse)Not determined94942029867151448Mouse
4141591Cq4_mcholesterol QTL 4 (mouse)Not determined91541175149411890Mouse
4141148Cq5_mcholesterol QTL 5 (mouse)Not determined93245242166452546Mouse
1301501Lmr2_mleishmaniasis resistance 2 (mouse)Not determined93694340650111140Mouse
10043987Stheal13_msoft tissue heal 13 (mouse)Not determined92679642160796552Mouse
10043971Obq32_mobesity QTL 32 (mouse)Not determined93781952871819528Mouse
1301045Sluc10_msusceptibility to lung cancer 10 (mouse)Not determined92030619754306370Mouse
1301184Bdln4_mbody length 4 (mouse)Not determined95015132084151448Mouse
12790997Adq2_maortic diameter QTL 2 (mouse)91574962749749627Mouse
1301435Trigq1_mtriglyceride QTL 1 (mouse)Not determined94442817478428262Mouse
1301241Renf1_mrenal failure 1 (mouse)Not determined95203447899792481Mouse
4142352Lmr17_mleishmaniasis resistance 17 (mouse)Not determined92030619754306370Mouse
12790986Pcho9_mplasma cholesterol 9 (mouse)93809957572099575Mouse
4141572Ntta3_mneurotensin transcript abundance 3 (mouse)Not determined4659767165831177Mouse
4141224Dxmod_mdoxorubicin nephropathy modifier (mouse)Not determined49452421101406120Mouse
11080993Tglq7_mtriglyceride level QTL 7 (mouse)95011130051511300Mouse
1301883Skull12_mskull morphology 12 (mouse)Not determined92030619754306370Mouse
13432191Actrse4_mactivity response to saline/ethanol 4 (mouse)94370321448603195Mouse
1300932Hdlq17_mHDL QTL 17 (mouse)Not determined92679642160796552Mouse
1301692Hts_mhypothermia sensitivity (mouse)Not determined93251117266511421Mouse
12880416V125Dq8_mvitamin D active form serum level QTL 8 (mouse)91601129650011296Mouse
13524527Bodwtq8_mbody wweight QTL 8 (mouse)94796321550293195Mouse
12904939Edlmmq8_mextensor digitorum longus muscle mass QTL 8 (mouse)92085274054852740Mouse
10043878Adip20_madiposity 20 (mouse)Not determined92725119461251323Mouse
11532695Sluc39b_msusceptibility to lung cancer 39b (mouse)92558748559587581Mouse
1302180Actd4_mactivity-distance traveled 4 (mouse)Not determined93243456366434857Mouse
10043877Adip21_madiposity 21 (mouse)Not determined95643910890439255Mouse
12791002Arlsq2_maortic root lesion size QTL 2 (mouse)93809957572099575Mouse
1300563Pgia5_mproteoglycan induced arthritis 5 (mouse)Not determined94883105682831177Mouse
13515056Adip20c_madiposity 20c (mouse)95414986354194054Mouse
1357637Si5lq2_mserum IGFBP-5 level QTL 2 (mouse)Not determined91541175149411890Mouse
1558968Tbdr1_mbody temperature response to dietary restriction, QTL 1 (mouse)Not determined93503447869034599Mouse
10043950Pbft5_mpercent body fat 5 (mouse)Not determined92030619754306370Mouse
4141323Ptnu3_mproteinuria 3 (mouse)Not determined93288970266889836Mouse
1558872Ibdq1_minflammatory bowel disease QTL 1 (mouse)Not determined93397884073439255Mouse
1301965Vmbic5_mventral midbrain iron content 5 (mouse)Not determined95759149265831177Mouse
12738449Spcq2_msperm count QTL 2 (mouse)93939988573399885Mouse
10045639Heal28_mwound healing/regeneration 28 (mouse)Not determined94348071477480860Mouse
1301782Chol11_mcholesterol 11 (mouse)Not determined92929292963293072Mouse
14746993Manh66_mmandible shape 66 (mouse)94981404883814048Mouse
1301439Morph2_mmorphine antinociception 2 (mouse)Not determined92015336254153492Mouse
1301558Stheal8_msoft tissue heal 8 (mouse)Not determined94348071477480860Mouse
1300643Pvcan2_mprotection against vaginal candidiasis 2 (mouse)Not determined91994340653943525Mouse
11532694Sluc39a_msusceptibility to lung cancer 39a (mouse)92558748559587581Mouse
1301972Cocrb8_mcocaine related behavior 8 (mouse)Not determined93503447869034599Mouse
11532693Sluc39_msusceptibility to lung cancer 39 (mouse)94064537448351476Mouse


Additional Information

Database Acc Id Source(s)
MGD MGI:3640532 MouseQtl

RGD Curation Notes
Note Type Note Reference