Anxrr26 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Anxrr26 (Anxiety related response QTL 26) Rattus norvegicus

Symbol: Anxrr26
Name: Anxiety related response QTL 26
RGD ID: 2313395
Previously known as: Tame 3
Trait: aggression-related behavior trait   (VT:0015014)    
Measurement Type: tameness/aggressiveness composite score   (CMO:0002136)    
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21949,976,481 - 53,225,766RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01954,735,217 - 58,072,143RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01965,454,505 - 68,775,038RGDRnor5.0
RGSC_v3.41952,161,990 - 55,455,363RGDRGSC3.4
Cross Type: intercross
Strains Crossed: Wild/Nov 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Vertebrate Trait

Rat Strain
Wild/Nov  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Genetic architecture of tameness in a rat model of animal domestication. Albert FW, etal., Genetics. 2009 Jun;182(2):541-54. Epub 2009 Apr 10.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
2069Agtangiotensinogen195252913952549618Rat
3529Rab4aRAB4A, member RAS oncogene family195179561351822706Rat
2025Acta1actin, alpha 1, skeletal muscle195188370951886735Rat
620324Dpep1dipeptidase 1195120983151237004Rat
621292Mvdmevalonate diphosphate decarboxylase195049636650506429Rat
621574Tsnaxtranslin-associated factor X195297584852989886Rat
621262Mlnrmotilin receptor195041357050422842Rat
620179Gnpatglyceronephosphate O-acyltransferase195282232652848872Rat
621179Rpl13ribosomal protein L13195115399051156541Rat
631375Egln1egl-9 family hypoxia-inducible factor 1195286790052907308Rat
1303257Zc3h18zinc finger CCCH-type containing 18195043486450479855Rat
2243Car5acarbonic anhydrase 5A194997309250002948Rat
735056Cox6c-ps1cytochrome c oxidase subunit VIc, pseudogene195219261252193470Rat
620245Exoc8exocyst complex component 8195285501052857499Rat
620573Cybacytochrome b-245 alpha chain195048759850495669Rat
1304851Cdk10cyclin-dependent kinase 10195126001251273009Rat
1303000Cdh15cadherin 15195090375750927151Rat
1304906Trappc2ltrafficking protein particle complex subunit 2L195066250750666193Rat
631359Disc1DISC1 scaffold protein195301420153223617Rat
628595Tubb3tubulin, beta 3 class III195145718751466243Rat
1307464BanpBtg3 associated nuclear protein195000771050082742Rat
1307466Cpne7copine 7195116431651182676Rat
1307469Zfp276zinc finger protein (C2H2 type) 276195129100551304240Rat
1307980Urb2URB2 ribosome biogenesis homolog195201101952036607Rat
1302950Rnf166ring finger protein 166195052943450539274Rat
1310008Dbndd1dysbindin domain containing 1195153915451548441Rat
1305837Spire2spire-type actin nucleation factor 2195137336851411920Rat
70965Capn9calpain 9195254944852586413Rat
1307758Aprtadenine phosphoribosyl transferase195062620150628491Rat
1311380FancaFA complementation group A195130412651362586Rat
1308822Piezo1piezo-type mechanosensitive ion channel component 1195054458050606812Rat
1309879Fam89afamily with sequence similarity 89, member A195271000252722630Rat
1559896C19h1orf198similar to human chromosome 1 open reading frame 198195260406052629436Rat
1310825Pgbd5piggyBac transposable element derived 5195233675152401906Rat
1312046Mc1rmelanocortin 1 receptor195145244851455375Rat
1309722Afg3l1AFG3 (ATPase family gene 3)-like 1195150861251535773Rat
1560667Trim67tripartite motif-containing 67195276399152805906Rat
1559496SprtnSprT-like N-terminal domain195285761252864864Rat
1309008Def8differentially expressed in FDCP 8 homolog195147478351495638Rat
1310186Ttc13tetratricopeptide repeat domain 13195263759952692196Rat
1311083Chmp1acharged multivesicular body protein 1A195123815351246433Rat
1309211Cdt1chromatin licensing and DNA replication factor 1195062071350625659Rat
1310264Arv1ARV1 homolog, fatty acid homeostasis modulator195269233752704156Rat
1307817Gas8growth arrest specific 8195155277051572323Rat
1309054Tcf25transcription factor 25195141534151449725Rat
1310002Sult5a1sulfotransferase family 5A, member 1195118928751204275Rat
1310215Taf5l1TATA-box binding protein associated factor 5 like 1195199170452011001Rat
1307827Nup133nucleoporin 133195189160651941243Rat
1306679Ankrd11ankyrin repeat domain containing 11195094028451098962Rat
1310547Cbfa2t3CBFA2/RUNX1 partner transcriptional co-repressor 3195067989750750028Rat
1309658Snai3snail family transcriptional repressor 3195051677150529295Rat
1310692Galnt2polypeptide N-acetylgalactosaminyltransferase 2195221322652324816Rat
727940Spg7SPG7 matrix AAA peptidase subunit, paraplegin195111708851151228Rat
1562218C19h1orf131similar to human chromosome 1 open reading frame 131195280793252822259Rat
1561507Spata33spermatogenesis associated 33195124651451258894Rat
1311222Abcb10ATP binding cassette subfamily B member 10195195265551982910Rat
1560840Spata2Lspermatogenesis associated 2-like195126907851273605Rat
1583874Zfp469zinc finger protein 469195028233750324010Rat
1562761Pabpn1lPABPN1 like195066996550673409Rat
1565149Vps9d1VPS9 domain containing 1195127699851290726Rat
1562594Ctu2cytosolic thiouridylase subunit 2195053918450544629Rat
1565391Galnsgalactosamine (N-acetyl)-6-sulfatase195062863950662477Rat
1582798Il17cinterleukin 17C195048489050486169Rat
1582810Zfpm1zinc finger protein, multitype 1195033435250391029Rat
1586037Acsf3acyl-CoA synthetase family member 3195083511650875557Rat
1563235Ccsapcentriole, cilia and spindle-associated protein195182495451843469Rat
1589822Cog2component of oligomeric golgi complex 2195249390152532667Rat
1596918Rhouras homolog family member U195164147651651249Rat
2318551Ssbp1-ps3single stranded DNA binding protein 1, pseudogene 3195291542552922800Rat
6502735LOC100909629uncharacterized LOC100909629195080663950817007Rat
7535996LOC102546589uncharacterized LOC102546589195169795751709179Rat
7536826LOC102549918uncharacterized LOC102549918195294402852960028Rat
7650106LOC102551789uncharacterized LOC102551789195111449551116989Rat
7670659LOC102546393uncharacterized LOC102546393195166145051671801Rat
9392387LOC103694354uncharacterized LOC103694354195061644350620704Rat
11455539LOC108348970uncharacterized LOC108348970195240782652416683Rat
11362865LOC108348963uncharacterized LOC108348963195174090651759396Rat
11440615Rps13-ps1ribosomal protein S13, pseudogene 1195111186351112717Rat
11416554LOC108348965uncharacterized LOC108348965195184913851859631Rat
11378322LOC108348960uncharacterized LOC108348960195085367750862848Rat
41276582LOC120098741U5 spliceosomal RNA195147932051479442Rat
41357037LOC120098646uncharacterized LOC120098646195262944652631588Rat
41359396LOC1200987215S ribosomal RNA195160831151608429Rat
41118193LOC120098494uncharacterized LOC120098494195081683050821350Rat
41093667LOC1200987185S ribosomal RNA195160303751603155Rat
41264674LOC1200986725S ribosomal RNA195158477351584891Rat
41366977LOC1200987485S ribosomal RNA195158302051583138Rat
41190846LOC1200987115S ribosomal RNA195159246751592585Rat
41367669Rna5s7RNA, 5S ribosomal 7195159951351599631Rat
41372170LOC120098745U6 spliceosomal RNA195189813751898243Rat
41400957LOC120098567uncharacterized LOC120098567195040871650410943Rat
41162948LOC1200987175S ribosomal RNA195157774151577859Rat
40945936LOC120098493uncharacterized LOC120098493195078283150806340Rat
41011831LOC1200987195S ribosomal RNA195160479551604913Rat
40977524Eif4e-ps8eukaryotic translation initiation factor 4E, pseudogene 8195203974552044162Rat
41014821LOC120098732small nucleolar RNA U3195111136951111592Rat
40984105Rna5s13RNA, 5S ribosomal 13195158126351581381Rat
40964221Rps25-ps3ribosomal protein S25, pseudogene 3195300408853007369Rat
40940624LOC120098677small nucleolar RNA MBII-202195115462651154708Rat
40968069LOC120098589uncharacterized LOC120098589195121389651215018Rat
40994374LOC120098606uncharacterized LOC120098606195036111950366739Rat
41047660LOC120098526uncharacterized LOC120098526195077749550779312Rat
41242229LOC1200987235S ribosomal RNA195157420351574321Rat
41050620LOC120098675small nucleolar RNA SNORA72195085932550859453Rat
41333231LOC1200986665S ribosomal RNA195157597951576097Rat
41338799Trnaa-agc43transfer RNA alanine (anticodon AGC) 43195276191052761990Rat
41060236LOC120098684small nucleolar RNA SNORA2/SNORA34 family195196412351964259Rat
41226032LOC1200987125S ribosomal RNA195159423151594349Rat
41016926LOC1200987165S ribosomal RNA195160127351601391Rat
41305797LOC120098676small nucleolar RNA SNORD43195131686151316921Rat
41019155Rna5s6RNA, 5S ribosomal 6195157950151579619Rat
41022570LOC1200987225S ribosomal RNA195161007551610193Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
36972D19Rat21129194997648149976619Ratregion
35028D19Rat2151195322561553225766Ratregion
35973D19Rat3164195259827852598438Ratregion
39944D19Rat58126195193334251933460Ratregion
39516D19Rat60205195321745853217652Ratregion
43136D19Rat105212195137283351373046Ratregion
43137D19Rat103149195157712351577272Ratregion
43137D19Rat103149195158064351580794Ratregion
43137D19Rat103149195158240051582551Ratregion
43137D19Rat103149195158591551586064Ratregion
43137D19Rat103149195159008951590238Ratregion
43137D19Rat103149195159184951591998Ratregion
43137D19Rat103149195159537351595522Ratregion
43137D19Rat103149195159713351597284Ratregion
43137D19Rat103149195159889551599044Ratregion
43137D19Rat103149195160065551600804Ratregion
43137D19Rat103149195160241751602568Ratregion
43137D19Rat103149195160593751606086Ratregion
43137D19Rat103149195160769151607842Ratregion
1638569D19Got113172195134467551344847Ratregion
1633285D19Got120106195129016051290261Ratregion
1640151D19Got111168195030007150300243Ratregion
1635650D19Got114167195222667052226839Ratregion
1636438D19Got127234195273732652737560Ratregion
1636706D19Got125133195278172352781856Ratregion
1633828D19Got115198195274009052740288Ratregion
5036085Aprt60195062674750627000Ratregion
7206650Zfpm1904195038966150390565Ratregion
5039272RH127611190195195237151952561Ratregion
5034097RH141350201195263761252637813Ratregion
5031598AU047796205195157712351577319Ratregion
5031598AU047796205195157888351579079Ratregion
5031598AU047796205195158064351580841Ratregion
5031598AU047796205195158240051582598Ratregion
5031598AU047796205195158591551586111Ratregion
5031598AU047796205195158832951588525Ratregion
5031598AU047796205195159008951590285Ratregion
5031598AU047796205195159184951592045Ratregion
5031598AU047796205195159537351595569Ratregion
5031598AU047796205195159713351597331Ratregion
5031598AU047796205195159889551599091Ratregion
5031598AU047796205195160065551600851Ratregion
5031598AU047796205195160241751602615Ratregion
5031598AU047796205195160593751606133Ratregion
5031598AU047796205195160769151607889Ratregion
5031600AU047788173195157709751577270Ratregion
5031600AU047788173195158061751580792Ratregion
5031600AU047788173195158237451582549Ratregion
5031600AU047788173195158588951586062Ratregion
5031600AU047788173195159006351590236Ratregion
5031600AU047788173195159182351591996Ratregion
5031600AU047788173195159534751595520Ratregion
5031600AU047788173195159710751597282Ratregion
5031600AU047788173195159886951599042Ratregion
5031600AU047788173195160062951600802Ratregion
5031600AU047788173195160239151602566Ratregion
5031600AU047788173195160591151606084Ratregion
5031600AU047788173195160766551607840Ratregion
5034261RH141971184195205330552053489Ratregion
5026272RH131577188195054423250544563Ratregion
5026418RH132136185195153919451539379Ratregion
5029119RH143593287195127318751273486Ratregion
5034624BF390337197195275638252756580Ratregion
5029605BI283745150195144935351449503Ratregion
5032511D8Ertd713e214195149542051495634Ratregion
5027377AI18209090195165109351651183Ratregion
5025048AU015315244195114983951150083Ratregion
5033383RH138637203195048794650488149Ratregion
5033607RH139442121195198629051986411Ratregion
5025638RH129086166195284890952849075Ratregion
5028291D8Mit148331195176834451768675Ratregion
5033833RH140287183195165091751651100Ratregion
5031137BI298201213195185600451856217Ratregion
5057498AI704778218195188372551883943Ratregion
5055411RH143786116195039000650390122Ratregion
5052484AA959943193195188372651883919Ratregion
5059780BE097847178195095193650952114Ratregion
5059860BE103433152195113415951134311Ratregion
5055571RH143878107195287400452874111Ratregion
5052989RH142390171195269516052695335Ratregion
5057794BE101560217195194973951949957Ratregion
5050736RH134229186195286444352864629Ratregion
5049998RH133803199195111385651114054Ratregion
5050844RH134290201195286570452865905Ratregion
5050302RH133978195195052962950529824Ratregion
5050562RH134128206195130210951302315Ratregion
5044028RH130368196195291162152911817Ratregion
5043884RH130283170195233585652336026Ratregion
5046140RH131581183195081678250816965Ratregion
5044262RH130502207195092620650926413Ratregion
5046338RH131695217195123765351237870Ratregion
5045360RH131133211195281079452811005Ratregion
5047476RH132350204195067593450676138Ratregion
5046210RH131622180195008532750085507Ratregion
5048950RH133199208195153892151539129Ratregion
5046740RH131927202195087521450875416Ratregion
5049746RH133658180195189254051892720Ratregion
5047232RH132209198195126062151260819Ratregion
5042042RH129205185195118932151189506Ratregion
5048396RH132879217195046602950466247Ratregion
5039976RH128017196195270383852704034Ratregion
5039756RH127889180195182247151822651Ratregion
5039800RH127914206195062644750626763Ratregion
5040782RH128480187195260414752604334Ratregion
5040040RH128055196195123826251238458Ratregion
5042938RH129735207195252661052526817Ratregion
5072220RH136722166195182504851825214Ratregion
5075590RH138682190195067954350679733Ratregion
5074244RH137904213195077785750778070Ratregion
5076656RH139302134195143229651432430Ratregion
5075368RH138554186195118242251182608Ratregion
5075448RH138599146195153633751536483Ratregion
5080674RH141716183195054475750544940Ratregion
5076084RH138970126195164985751649983Ratregion
5075568RH138669137195144692051447057Ratregion
5079516RH141043216195126882751269043Ratregion
5080054RH141356205195280807452808279Ratregion
5080324RH141514180195141100351411702Ratregion
5073774RH137631165195322336353223528Ratregion
5073114RH137246150195203628952036439Ratregion
5073396RH137412214195258620252586416Ratregion
5072114RH136659212195269754052697752Ratregion
5074308RH137942127195040871850408845Ratregion
5071782RH135281207195005532950055536Ratregion
5061714BE105999165195095063250950797Ratregion
5067058AU047990217195295994252960161Ratregion
5067150AU0478630195157712351577283Ratregion
5067150AU0478630195158064351580805Ratregion
5067150AU0478630195158240051582562Ratregion
5067150AU0478630195158591551586075Ratregion
5067150AU0478630195159008951590249Ratregion
5067150AU0478630195159184951592009Ratregion
5067150AU0478630195159537351595533Ratregion
5067150AU0478630195159713351597295Ratregion
5067150AU0478630195159889551599055Ratregion
5067150AU0478630195160065551600815Ratregion
5067150AU0478630195160241751602579Ratregion
5067150AU0478630195160593751606097Ratregion
5067150AU0478630195160769151607853Ratregion
5067194AU0477530195157709751577294Ratregion
5067194AU0477530195157885751579054Ratregion
5067194AU0477530195158061751580816Ratregion
5067194AU0477530195158237451582573Ratregion
5067194AU0477530195158412951584326Ratregion
5067194AU0477530195158588951586086Ratregion
5067194AU0477530195158830351588500Ratregion
5067194AU0477530195159006351590260Ratregion
5067194AU0477530195159182351592020Ratregion
5067194AU0477530195159534751595544Ratregion
5067194AU0477530195159710751597306Ratregion
5067194AU0477530195159886951599066Ratregion
5067194AU0477530195160062951600826Ratregion
5067194AU0477530195160239151602590Ratregion
5067194AU0477530195160591151606108Ratregion
5067194AU0477530195160766551607864Ratregion
5067256AU047866154195157712651577280Ratregion
5067256AU047866154195158064651580802Ratregion
5067256AU047866154195158240351582559Ratregion
5067256AU047866154195158591851586072Ratregion
5067256AU047866154195159009251590246Ratregion
5067256AU047866154195159185251592006Ratregion
5067256AU047866154195159537651595530Ratregion
5067256AU047866154195159713651597292Ratregion
5067256AU047866154195159889851599052Ratregion
5067256AU047866154195160065851600812Ratregion
5067256AU047866154195160242051602576Ratregion
5067256AU047866154195160594051606094Ratregion
5067256AU047866154195160769451607850Ratregion
5067280AU047851229195157712351577236Ratregion
5067280AU047851229195158591551586028Ratregion
5067280AU047851229195159008951590202Ratregion
5067280AU047851229195159184951591962Ratregion
5067280AU047851229195159537351595486Ratregion
5067280AU047851229195159713351597248Ratregion
5067280AU047851229195159889551599008Ratregion
5067280AU047851229195160065551600768Ratregion
5067280AU047851229195160241751602532Ratregion
5067280AU047851229195160593751606050Ratregion
5067280AU047851229195160769151607806Ratregion
5067320AU047827207195157712151577322Ratregion
5067320AU047827207195157888151579082Ratregion
5067320AU047827207195158064151580844Ratregion
5067320AU047827207195158239851582601Ratregion
5067320AU047827207195158591351586114Ratregion
5067320AU047827207195158832751588528Ratregion
5067320AU047827207195159008751590288Ratregion
5067320AU047827207195159184751592048Ratregion
5067320AU047827207195159537151595572Ratregion
5067320AU047827207195159713151597334Ratregion
5067320AU047827207195159889351599094Ratregion
5067320AU047827207195160065351600854Ratregion
5067320AU047827207195160241551602618Ratregion
5067320AU047827207195160593551606136Ratregion
5067320AU047827207195160768951607892Ratregion
5067380AU047789176195157709651577268Ratregion
5067380AU047789176195158061651580790Ratregion
5067380AU047789176195158237351582547Ratregion
5067380AU047789176195158588851586060Ratregion
5067380AU047789176195159006251590234Ratregion
5067380AU047789176195159182251591994Ratregion
5067380AU047789176195159534651595518Ratregion
5067380AU047789176195159710651597280Ratregion
5067380AU047789176195159886851599040Ratregion
5067380AU047789176195160062851600800Ratregion
5067380AU047789176195160239051602564Ratregion
5067380AU047789176195160591051606082Ratregion
5067380AU047789176195160766451607838Ratregion
5067396AU047777189195157713251577319Ratregion
5067396AU047777189195158065251580841Ratregion
5067396AU047777189195158240951582598Ratregion
5067396AU047777189195158592451586111Ratregion
5067396AU047777189195159185851592045Ratregion
5067396AU047777189195159538251595569Ratregion
5067396AU047777189195159714251597331Ratregion
5067396AU047777189195159890451599091Ratregion
5067396AU047777189195160066451600851Ratregion
5067396AU047777189195160242651602615Ratregion
5067396AU047777189195160594651606133Ratregion
5067396AU047777189195160770051607889Ratregion
5067400AU047773164195157712151577285Ratregion
5067400AU047773164195158064151580807Ratregion
5067400AU047773164195158239851582564Ratregion
5067400AU047773164195158591351586077Ratregion
5067400AU047773164195159008751590251Ratregion
5067400AU047773164195159184751592011Ratregion
5067400AU047773164195159537151595535Ratregion
5067400AU047773164195159713151597297Ratregion
5067400AU047773164195159889351599057Ratregion
5067400AU047773164195160065351600817Ratregion
5067400AU047773164195160241551602581Ratregion
5067400AU047773164195160593551606099Ratregion
5067400AU047773164195160768951607855Ratregion
5070075RH94458159195062641650626575Ratregion
5069804AU0479360195157683051577020Ratregion
5069804AU0479360195158210751582297Ratregion
5069804AU0479360195160212451602314Ratregion
5069804AU0479360195160388451604078Ratregion
5069804AU0479360195160916251609352Ratregion
5070528D8Ertd325e210195144945551449665Ratregion
5061910AI029641187195232459552324782Ratregion
5062470BE106712157195157208551572242Ratregion
5065574BE109337150195063225550632405Ratregion
5060844BF401198188195078288650783074Ratregion
5062826BI295081165195034540350345568Ratregion
5064208BI296374220195318556453185784Ratregion
5065324AA963604209195165103551651244Ratregion
5060494BE110224166195124482451244990Ratregion
5060526BE110287203195125865851258861Ratregion
5064574BF399372214195008200350082217Ratregion
5066130BE116945150195285067852850828Ratregion
5061314BE111581169195298615052986319Ratregion
5061330BF396236123195277454852774671Ratregion
5064656BF399501227195153992051540147Ratregion
5064770BE108480208195146736551467573Ratregion
5066316PMC151529P1486195188491951885405Ratregion
5061674BE105814159195107378051073939Ratregion
5084120AA944284189195182593951826128Ratregion
5087104AI407100209195115177751151986Ratregion
5086457BE107052158195264008252640240Ratregion
5082995BI281562205195232282752323030Ratregion
5088309AU048492120194999598749996107Ratregion
5083865AA943006172195157092851571100Ratregion
5090503AU049789212195148372151483933Ratregion
5084060AI407691197195144802051448217Ratregion
5084284AI014001199195284870452848907Ratregion
5084378AI102036120195123871251238832Ratregion
5082009BF415610135195313150753131642Ratregion
5081040RH141930181195164993251650113Ratregion
5081228RH142038183195189786951898052Ratregion
5082809BF390154150195270429752704447Ratregion
5086341AI178936195195290344452903639Ratregion
5083213BG380104100195039046850390568Ratregion
5085563AI231345213195269420752694420Ratregion
5083685BI276801159195195284351953002Ratregion
5503027MARC_52622-52623:1146767377:1174195143486351435155Ratregion
5503348UniSTS:238171815195130433951305154Ratregion
5506088UniSTS:498328210195146587351466083Ratregion
5506815G46073717195075340150754118Ratregion
5507001fi45a03.x11464195307462153076085Ratregion
5499995UniSTS:236036107195067972950679836Ratregion
5501091PMC133998P8537195188456851885392Ratregion
5501774MARC_12079-12080:1004624307:1611195055492050555531Ratregion
5501792MARC_12315-12316:1005759661:1409195130091651301325Ratregion
5502022MARC_24021-24022:1029778648:1606195146518851465794Ratregion
Position Markers

Flank 1: (D19Rat21)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21949,976,481 - 49,976,619 (+)MAPPER
Rnor_6.01954,735,217 - 54,735,354NCBI
Rnor_5.01965,454,505 - 65,454,642UniSTS
RGSC_v3.41952,161,990 - 52,162,128RGD
RGSC_v3.41952,161,991 - 52,162,128UniSTS
RGSC_v3.11952,166,872 - 52,167,009RGD
Celera1949,221,436 - 49,221,573UniSTS
RH 3.4 Map19682.9UniSTS
RH 3.4 Map19682.9RGD
RH 2.0 Map19661.4RGD
Cytogenetic Map19q12UniSTS
Peak: (D19Rat21)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21949,976,481 - 49,976,619 (+)MAPPER
Rnor_6.01954,735,217 - 54,735,354NCBI
Rnor_5.01965,454,505 - 65,454,642UniSTS
RGSC_v3.41952,161,990 - 52,162,128RGD
RGSC_v3.41952,161,991 - 52,162,128UniSTS
RGSC_v3.11952,166,872 - 52,167,009RGD
Celera1949,221,436 - 49,221,573UniSTS
RH 3.4 Map19682.9UniSTS
RH 3.4 Map19682.9RGD
RH 2.0 Map19661.4RGD
Cytogenetic Map19q12UniSTS
Flank 2: (D19Rat2)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21953,225,615 - 53,225,766 (+)MAPPER
Rnor_6.01958,071,993 - 58,072,143NCBI
Rnor_5.01968,774,888 - 68,775,038UniSTS
RGSC_v3.41955,455,212 - 55,455,363RGD
RGSC_v3.41955,455,213 - 55,455,363UniSTS
RGSC_v3.11955,460,094 - 55,460,244RGD
Celera1952,586,052 - 52,586,202UniSTS
RH 3.4 Map19576.0UniSTS
RH 3.4 Map19576.0RGD
RH 2.0 Map19607.0RGD
SHRSP x BN Map1943.8598RGD
Cytogenetic Map19 RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
724566Uae12Urinary albumin excretion QTL 125urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19218792756457239Rat
1331737Uae29Urinary albumin excretion QTL 295.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19409615555283277Rat
7411549Bw130Body weight QTL 13050.001body mass (VT:0001259)body weight gain (CMO:0000420)191545586057337602Rat
1578764Stresp19Stress response QTL 193.60.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)191563020157337602Rat
2298478Eau8Experimental allergic uveoretinitis QTL 80.0163uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)191715443357337602Rat
61350Bp32Blood pressure QTL 320.012arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)192048357557337602Rat
724546Kidm3Kidney mass QTL 33.1kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)192932249057337602Rat
1358200Insglur2Insulin/glucose ratio QTL 24.1blood glucose amount (VT:0000188)serum insulin level (CMO:0000358)193383821455283146Rat
1358200Insglur2Insulin/glucose ratio QTL 24.1blood glucose amount (VT:0000188)serum glucose level (CMO:0000543)193383821455283146Rat
5135224Leukc1Leukocyte quantity QTL 1eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)194434021455283277Rat
2313395Anxrr26Anxiety related response QTL 26aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)194997648153225766Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general measurement method: animals were confronted by an approaching gloved human hand attempting to handle them; these trials were videotaped and analyzed by independent observers then principal component analysis (PCA) was done on the individual glove test measures. 2313383
qtl_general number of animals used:47 F1and 733 F2 rats (383 females) 2313383
qtl_general lineage: 4 unrelated tame and 4 aggressive rats were mated to get 11 F0 rats, these were mated reciprocally to get F1 rats that were backcrossed to F0 rats to get F2 animals 2313383