Nucleotide Sequences
QTLs in Region (mRatBN7.2)
RGD ID | Symbol | Name | LOD | P Value | Trait | Sub Trait | Chr | Start | Stop | Species | 1576314 | Eutr1 | Estrogen induced uterine response QTL 1 | uterus integrity trait (VT:0010575) | pyometritis severity score (CMO:0002009) | 5 | 2138965 | 166875058 | Rat | 1641912 | Alcrsp18 | Alcohol response QTL 18 | response to alcohol trait (VT:0010489) | duration of loss of righting reflex (CMO:0002289) | 5 | 35189153 | 141643988 | Rat | 1549845 | Scl44 | Serum cholesterol level QTL 44 | 6 | blood cholesterol amount (VT:0000180) | serum total cholesterol level (CMO:0000363) | 5 | 40128307 | 148607290 | Rat | 1578766 | Tcas11 | Tongue tumor susceptibility QTL 11 | 4.12 | tongue integrity trait (VT:0010553) | number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950) | 5 | 46711509 | 161317411 | Rat | 1576312 | Emca8 | Estrogen-induced mammary cancer QTL 8 | 4.1 | mammary gland integrity trait (VT:0010552) | mammary tumor number (CMO:0000343) | 5 | 50328551 | 141643988 | Rat | 61426 | Scl2 | Serum cholesterol level QTL 2 | 7.3 | 0.001 | blood cholesterol amount (VT:0000180) | serum total cholesterol level (CMO:0000363) | 5 | 59793399 | 143070159 | Rat | 61393 | Bp7 | Blood pressure QTL 7 | 4.5 | 0.0001 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 5 | 60293434 | 161481680 | Rat | 1354598 | Srn6 | Serum renin concentration QTL 6 | 3.8 | blood renin amount (VT:0003349) | plasma renin activity level (CMO:0000116) | 5 | 69540295 | 151018848 | Rat | 1302790 | Scl20 | Serum cholesterol level QTL 20 | 6.4 | 0.0001 | blood cholesterol amount (VT:0000180) | plasma total cholesterol level (CMO:0000585) | 5 | 82394392 | 166664054 | Rat | 61452 | Ciaa5 | CIA Autoantibody QTL 5 | 3.5 | blood autoantibody amount (VT:0003725) | calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281) | 5 | 94858972 | 143070159 | Rat | 1331796 | Thshl2 | Thyroid stimulating hormone level QTL 2 | 2.3 | blood thyroid-stimulating hormone amount (VT:0005119) | serum thyroid stimulating hormone level (CMO:0001248) | 5 | 97059760 | 147465714 | Rat | 1358187 | Emca1 | Estrogen-induced mammary cancer QTL 1 | 4.4 | mammary gland integrity trait (VT:0010552) | post-insult time to mammary tumor formation (CMO:0000345) | 5 | 99216724 | 148607142 | Rat | 1578673 | Bmd13 | Bone mineral density QTL 13 | 4.9 | femur mineral mass (VT:0010011) | trabecular volumetric bone mineral density (CMO:0001729) | 5 | 103689353 | 148689353 | Rat | 2317056 | Wbc3 | White blood cell count QTL 3 | 2.51 | 0.01 | leukocyte quantity (VT:0000217) | white blood cell count (CMO:0000027) | 5 | 105999803 | 150999803 | Rat | 7207488 | Bss110 | Bone structure and strength QTL 1 | 8.4 | femur strength trait (VT:0010010) | femur stiffness (CMO:0001674) | 5 | 106906205 | 151906205 | Rat | 7207491 | Bss112 | Bone structure and strength QTL 112 | 7 | femur morphology trait (VT:0000559) | femur midshaft cortical cross-sectional area (CMO:0001663) | 5 | 106906205 | 151906205 | Rat | 7207481 | Bss106 | Bone structure and strength QTL 106 | 7.9 | femur strength trait (VT:0010010) | femur ultimate force (CMO:0001675) | 5 | 106906205 | 151906205 | Rat | 7207486 | Bss109 | Bone structure and strength QTL 109 | femur strength trait (VT:0010010) | femur total energy absorbed before break (CMO:0001677) | 5 | 106906205 | 151906205 | Rat | 1549838 | Bss4 | Bone structure and strength QTL 4 | 9.2 | femur strength trait (VT:0010010) | femur midshaft polar moment of inertia (CMO:0001669) | 5 | 106906205 | 151906205 | Rat | 1298089 | Scl14 | Serum cholesterol level QTL 14 | 5.8 | 0.0004 | blood cholesterol amount (VT:0000180) | plasma total cholesterol level (CMO:0000585) | 5 | 108845856 | 153845856 | Rat | 1598847 | Cm62 | Cardiac mass QTL 62 | 3.4 | heart mass (VT:0007028) | heart weight to body weight ratio (CMO:0000074) | 5 | 108845856 | 153845856 | Rat | 8657050 | Bw146 | Body weight QTL 146 | 19.84 | 0.001 | body mass (VT:0001259) | body weight gain (CMO:0000420) | 5 | 108938288 | 153938288 | Rat | 8694441 | Bw169 | Body weight QTL 169 | 17.61 | 0.001 | retroperitoneal fat pad mass (VT:0010430) | retroperitoneal fat pad weight to body weight ratio (CMO:0000635) | 5 | 111416838 | 156416838 | Rat | 8694198 | Abfw3 | Abdominal fat weight QTL 3 | 16.13 | 0.001 | visceral adipose mass (VT:0010063) | abdominal fat pad weight to body weight ratio (CMO:0000095) | 5 | 111416838 | 156416838 | Rat | 8694389 | Bw160 | Body weight QTL 160 | 6.17 | 0.001 | body lean mass (VT:0010483) | lean tissue morphological measurement (CMO:0002184) | 5 | 111416838 | 156416838 | Rat | 8552960 | Pigfal15 | Plasma insulin-like growth factor 1 level QTL 15 | blood insulin-like growth factor amount (VT:0010479) | plasma insulin-like growth factor 1 level (CMO:0001299) | 5 | 111416838 | 156416838 | Rat | 1581510 | Cm54 | Cardiac mass QTL 54 | 3.4 | 0.05 | heart left ventricle mass (VT:0007031) | heart left ventricle weight to body weight ratio (CMO:0000530) | 5 | 120740824 | 143608494 | Rat | 2293642 | Bss37 | Bone structure and strength QTL 37 | 4.64 | 0.0001 | femur strength trait (VT:0010010) | femur ultimate force (CMO:0001675) | 5 | 120740824 | 151018848 | Rat | 1641920 | Colcs1 | Colorectal carcinoma susceptibility QTL 1 | 2.99 | 0.0055 | intestine integrity trait (VT:0010554) | benign colorectal tumor surface area measurement (CMO:0001799) | 5 | 121846814 | 166846814 | Rat | 10053720 | Scort26 | Serum corticosterone level QTL 26 | 2.06 | 0.0147 | blood corticosterone amount (VT:0005345) | plasma corticosterone level (CMO:0001173) | 5 | 124965598 | 166875058 | Rat | 1300122 | Wbc1 | White blood cell count QTL 1 | 2.75 | leukocyte quantity (VT:0000217) | total white blood cell count (CMO:0000365) | 5 | 125392826 | 139989768 | Rat | 724525 | Bp147 | Blood pressure QTL 147 | 4.3 | 0.0001 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 5 | 126424772 | 166875058 | Rat | 1598819 | Bp292 | Blood pressure QTL 292 | 4.3 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 5 | 127798274 | 166875058 | Rat | 1598861 | Cm64 | Cardiac mass QTL 64 | 2.9 | heart mass (VT:0007028) | heart weight to body weight ratio (CMO:0000074) | 5 | 127798274 | 166875058 | Rat | 8552908 | Pigfal4 | Plasma insulin-like growth factor 1 level QTL 4 | 6.6 | blood insulin-like growth factor amount (VT:0010479) | plasma insulin-like growth factor 1 level (CMO:0001299) | 5 | 128506074 | 166875058 | Rat | 8694169 | Bw148 | Body weight QTL 148 | 5 | 0.001 | body mass (VT:0001259) | body weight gain (CMO:0000420) | 5 | 128506074 | 166875058 | Rat | 634349 | Bp139 | Blood pressure QTL 139 | 0.001 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 5 | 128924607 | 166875058 | Rat | 1331803 | Rf32 | Renal function QTL 32 | 2.798 | kidney blood vessel physiology trait (VT:0100012) | absolute change in renal vascular resistance (CMO:0001900) | 5 | 129132428 | 143070159 | Rat | 70156 | Niddm30 | Non-insulin dependent diabetes mellitus QTL 30 | 3.98 | blood glucose amount (VT:0000188) | blood glucose level area under curve (AUC) (CMO:0000350) | 5 | 129132447 | 151006154 | Rat | 738018 | Anxrr4 | Anxiety related response QTL 4 | 5.1 | exploratory behavior trait (VT:0010471) | percentage of entries into a discrete space in an experimental apparatus (CMO:0000961) | 5 | 130130159 | 166875058 | Rat | 7794791 | Mcs33 | Mammary carcinoma susceptibility QTL 33 | 1.93 | mammary gland integrity trait (VT:0010552) | mammary tumor incidence/prevalence measurement (CMO:0000946) | 5 | 131345754 | 166875058 | Rat | 631505 | Bp103 | Blood pressure QTL 103 | 3.2 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 5 | 132717196 | 165560427 | Rat | 631562 | Apr2 | Acute phase response QTL 2 | 3.7 | blood murinoglobulin 1 amount (VT:0010597) | plasma murinoglobulin 1 level (CMO:0001931) | 5 | 135927956 | 166875058 | Rat | 61444 | Strs2 | Sensitivity to stroke QTL 2 | 4.7 | cerebrum integrity trait (VT:0010549) | post-insult time to onset of cerebrovascular lesion (CMO:0002343) | 5 | 135929696 | 166875058 | Rat | 1300179 | Kidm5 | Kidney mass QTL 5 | 3.51 | kidney mass (VT:0002707) | left kidney wet weight (CMO:0000083) | 7 | 43747012 | 135012528 | Rat | 70173 | Niddm19 | Non-insulin dependent diabetes mellitus QTL 19 | 4.33 | 0.00005 | blood glucose amount (VT:0000188) | blood glucose level area under curve (AUC) (CMO:0000350) | 7 | 64002457 | 135012528 | Rat | 634331 | Pia17 | Pristane induced arthritis QTL 17 | 4.7 | joint integrity trait (VT:0010548) | arthritic paw count (CMO:0001460) | 7 | 73829340 | 130221005 | Rat | 634322 | Bw12 | Body weight QTL 12 | 0 | body mass (VT:0001259) | body weight (CMO:0000012) | 7 | 83153392 | 128153392 | Rat | 1358891 | Bp265 | Blood pressure QTL 265 | 2.21 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 7 | 83591953 | 134666232 | Rat | 1358914 | Bp266 | Blood pressure QTL 266 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 7 | 83591953 | 134666232 | Rat | 71114 | Niddm14 | Non-insulin dependent diabetes mellitus QTL 14 | 4.5 | blood glucose amount (VT:0000188) | plasma glucose level (CMO:0000042) | 7 | 84257275 | 129257275 | Rat | 2298475 | Eau6 | Experimental allergic uveoretinitis QTL 6 | 0.0029 | uvea integrity trait (VT:0010551) | experimental autoimmune uveitis score (CMO:0001504) | 7 | 84257275 | 129257275 | Rat | 1558655 | Swd4 | Spike wave discharge measurement QTL 4 | 3.68 | 0.0002 | brain electrophysiology trait (VT:0010557) | brain spike-and-wave discharge severity grade (CMO:0001988) | 7 | 86983365 | 131983365 | Rat | 1549899 | Stresp8 | Stress response QTL 8 | 4.37 | 0.0008 | stress-related behavior trait (VT:0010451) | defensive burying duration (CMO:0001961) | 7 | 90482196 | 135012528 | Rat | 2299163 | Iddm34 | Insulin dependent diabetes mellitus QTL 34 | 2.71 | blood glucose amount (VT:0000188) | age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140) | 7 | 91281130 | 135012528 | Rat | 631687 | Hcas1 | Hepatocarcinoma susceptibility QTL 1 | 3.9 | 0.001 | liver integrity trait (VT:0010547) | liver tumorous lesion volume to total liver volume ratio (CMO:0001082) | 7 | 91412594 | 129807172 | Rat | 731176 | Glom5 | Glomerulus QTL 5 | 2.5 | 0.0035 | kidney glomerulus morphology trait (VT:0005325) | count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002) | 7 | 96670164 | 135012528 | Rat | 1331731 | Bp216 | Blood pressure QTL 216 | 2.851 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 7 | 102297359 | 133492884 | Rat | 731174 | Uae23 | Urinary albumin excretion QTL 23 | 2.4 | 0.0042 | urine albumin amount (VT:0002871) | urine albumin excretion rate (CMO:0000757) | 7 | 104603555 | 135012528 | Rat | 2306821 | Bp335 | Blood pressure QTL 335 | 0.001 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 7 | 106571501 | 135012528 | Rat | 631663 | Bw6 | Body weight QTL 6 | 3.4 | body mass (VT:0001259) | body weight (CMO:0000012) | 7 | 111075573 | 134976056 | Rat | 1300112 | Bp183 | Blood pressure QTL 183 | 3.51 | arterial blood pressure trait (VT:2000000) | blood pressure time series experimental set point of the baroreceptor response (CMO:0002593) | 7 | 111182207 | 135012528 | Rat | 1331748 | Bp215 | Blood pressure QTL 215 | 4.043 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 7 | 112308254 | 133492884 | Rat | 1357339 | Stl14 | Serum triglyceride level QTL 14 | 3.45 | 0.0001 | blood triglyceride amount (VT:0002644) | serum triglyceride level (CMO:0000360) | 7 | 112729683 | 133492707 | Rat | 1354582 | Stl11 | Serum triglyceride level QTL 11 | 3.42 | blood triglyceride amount (VT:0002644) | serum triglyceride level (CMO:0000360) | 7 | 119513385 | 135012528 | Rat | 724566 | Uae12 | Urinary albumin excretion QTL 12 | 5 | urine albumin amount (VT:0002871) | urine albumin level (CMO:0000130) | 19 | 2187927 | 56457239 | Rat | 1331737 | Uae29 | Urinary albumin excretion QTL 29 | 5.5 | urine albumin amount (VT:0002871) | urine albumin level (CMO:0000130) | 19 | 4096155 | 55283277 | Rat | 7411549 | Bw130 | Body weight QTL 130 | 5 | 0.001 | body mass (VT:0001259) | body weight gain (CMO:0000420) | 19 | 15455860 | 57337602 | Rat | 1578764 | Stresp19 | Stress response QTL 19 | 3.6 | 0.001 | blood renin amount (VT:0003349) | plasma renin activity level (CMO:0000116) | 19 | 15630201 | 57337602 | Rat | 2298478 | Eau8 | Experimental allergic uveoretinitis QTL 8 | 0.0163 | uvea integrity trait (VT:0010551) | experimental autoimmune uveitis score (CMO:0001504) | 19 | 17154433 | 57337602 | Rat | 61350 | Bp32 | Blood pressure QTL 32 | 0.012 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 19 | 20483575 | 57337602 | Rat | 724546 | Kidm3 | Kidney mass QTL 3 | 3.1 | kidney mass (VT:0002707) | calculated kidney weight (CMO:0000160) | 19 | 29322490 | 57337602 | Rat | 1358200 | Insglur2 | Insulin/glucose ratio QTL 2 | 4.1 | blood glucose amount (VT:0000188) | serum insulin level (CMO:0000358) | 19 | 33838214 | 55283146 | Rat | 1358200 | Insglur2 | Insulin/glucose ratio QTL 2 | 4.1 | blood glucose amount (VT:0000188) | serum glucose level (CMO:0000543) | 19 | 33838214 | 55283146 | Rat | 5135224 | Leukc1 | Leukocyte quantity QTL 1 | eosinophil quantity (VT:0002602) | blood eosinophil count (CMO:0000033) | 19 | 44340214 | 55283277 | Rat | 2313395 | Anxrr26 | Anxiety related response QTL 26 | aggression-related behavior trait (VT:0015014) | tameness/aggressiveness composite score (CMO:0002136) | 19 | 49976481 | 53225766 | Rat | |
Additional Information