AU047866 Marker Search Result - Rat Genome Database

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Marker: AU047866

Symbol: AU047866
Previously known as:
RGD ID: 5067256
Expected Size: 154 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21951,605,940 - 51,606,094 (+)MAPPERmRatBN7.2
mRatBN7.21951,585,918 - 51,586,072 (+)MAPPERmRatBN7.2
mRatBN7.21951,582,403 - 51,582,559 (+)MAPPERmRatBN7.2
mRatBN7.21951,580,646 - 51,580,802 (+)MAPPERmRatBN7.2
mRatBN7.21951,607,694 - 51,607,850 (+)MAPPERmRatBN7.2
mRatBN7.21951,602,420 - 51,602,576 (+)MAPPERmRatBN7.2
mRatBN7.21951,597,136 - 51,597,292 (+)MAPPERmRatBN7.2
mRatBN7.21951,577,126 - 51,577,280 (+)MAPPERmRatBN7.2
mRatBN7.21951,600,658 - 51,600,812 (+)MAPPERmRatBN7.2
mRatBN7.21951,598,898 - 51,599,052 (+)MAPPERmRatBN7.2
mRatBN7.21951,595,376 - 51,595,530 (+)MAPPERmRatBN7.2
mRatBN7.21951,591,852 - 51,592,006 (+)MAPPERmRatBN7.2
mRatBN7.21951,590,092 - 51,590,246 (+)MAPPERmRatBN7.2
Rnor_6.01956,338,113 - 56,338,275NCBIRnor6.0
Celera1950,804,943 - 50,805,091UniSTS


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer AGCAGGCACGGAACCTAAG
Reverse Primer TAAGGTGACTCCTGCGAGAGT
 

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
41093667LOC1200987185S ribosomal RNA195160303751603155Rat
41264674LOC1200986725S ribosomal RNA195158477351584891Rat
41366977LOC1200987485S ribosomal RNA195158302051583138Rat
41190846LOC1200987115S ribosomal RNA195159246751592585Rat
41367669Rna5s7RNA, 5S ribosomal 7195159951351599631Rat
41162948LOC1200987175S ribosomal RNA195157774151577859Rat
41011831LOC1200987195S ribosomal RNA195160479551604913Rat
40984105Rna5s13RNA, 5S ribosomal 13195158126351581381Rat
41226032LOC1200987125S ribosomal RNA195159423151594349Rat
41016926LOC1200987165S ribosomal RNA195160127351601391Rat
41019155Rna5s6RNA, 5S ribosomal 6195157950151579619Rat



QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
724566Uae12Urinary albumin excretion QTL 125urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19218792756457239Rat
1331737Uae29Urinary albumin excretion QTL 295.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19409615555283277Rat
7411549Bw130Body weight QTL 13050.001body mass (VT:0001259)body weight gain (CMO:0000420)191545586057337602Rat
1578764Stresp19Stress response QTL 193.60.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)191563020157337602Rat
2298478Eau8Experimental allergic uveoretinitis QTL 80.0163uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)191715443357337602Rat
61350Bp32Blood pressure QTL 320.012arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)192048357557337602Rat
724546Kidm3Kidney mass QTL 33.1kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)192932249057337602Rat
1358200Insglur2Insulin/glucose ratio QTL 24.1blood glucose amount (VT:0000188)serum insulin level (CMO:0000358)193383821455283146Rat
1358200Insglur2Insulin/glucose ratio QTL 24.1blood glucose amount (VT:0000188)serum glucose level (CMO:0000543)193383821455283146Rat
5135224Leukc1Leukocyte quantity QTL 1eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)194434021455283277Rat
2313395Anxrr26Anxiety related response QTL 26aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)194997648153225766Rat


Additional Information

Database Acc Id Source(s)
UniSTS 110099 UniSTS