Gnb1 (guanine nucleotide binding protein (G protein), beta 1) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Gnb1 (guanine nucleotide binding protein (G protein), beta 1) Mus musculus
Analyze
Symbol: Gnb1
Name: guanine nucleotide binding protein (G protein), beta 1
RGD ID: 737510
MGI Page MGI
Description: Predicted to enable several functions, including GTPase binding activity; alkylglycerophosphoethanolamine phosphodiesterase activity; and spectrin binding activity. Acts upstream of or within several processes, including phospholipase C-activating G protein-coupled receptor signaling pathway; retina development in camera-type eye; and sensory perception of taste. Located in photoreceptor outer segment. Part of heterotrimeric G-protein complex. Is active in synapse. Is expressed in several structures, including alimentary system; central nervous system; eye; genitourinary system; and hemolymphoid system gland. Human ortholog(s) of this gene implicated in acute lymphoblastic leukemia; autosomal dominant intellectual developmental disorder 42; congestive heart failure; and myelodysplastic syndrome. Orthologous to human GNB1 (G protein subunit beta 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AA409223; C77571; Gnb-1; guanine nucleotide binding protein, beta 1; guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1; heterotrimeric guanine nucleotide-binding protein 2a; Hg2a; MGC98074; transducin beta chain 1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Gnb1-ps2   Gnb1-ps3  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394155,575,514 - 155,643,726 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4155,575,818 - 155,643,726 (+)EnsemblGRCm39 Ensembl
GRCm384155,491,300 - 155,559,269 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4155,491,361 - 155,559,269 (+)EnsemblGRCm38mm10GRCm38
MGSCv374154,865,470 - 154,933,378 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364154,335,170 - 154,401,618 (+)NCBIMGSCv36mm8
Celera4157,766,104 - 157,834,163 (+)NCBICelera
Cytogenetic Map4E2NCBI
cM Map486.17NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (EXP)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2,4,6-tribromophenol  (ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
2,4-dinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3H-1,2-dithiole-3-thione  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxynon-2-enal  (ISO)
6-propyl-2-thiouracil  (ISO)
acrolein  (ISO)
alendronic acid  (ISO)
alpha-pinene  (ISO)
amitrole  (ISO)
ammonium chloride  (ISO)
Aroclor 1254  (EXP)
arsane  (ISO)
arsenic atom  (ISO)
barium(0)  (ISO)
beauvericin  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bisphenol A  (EXP,ISO)
Bisphenol B  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
carbon nanotube  (EXP)
chloropicrin  (ISO)
cobalt dichloride  (ISO)
cocaine  (ISO)
crocidolite asbestos  (EXP)
cyclosporin A  (ISO)
daidzein  (ISO)
decabromodiphenyl ether  (EXP,ISO)
delta8-THC  (EXP)
diazinon  (ISO)
dichlorine  (ISO)
dioxygen  (EXP)
doxorubicin  (ISO)
enniatin  (ISO)
ethanol  (EXP)
fipronil  (ISO)
folic acid  (EXP)
FR900359  (ISO)
fumonisin B1  (EXP)
gentamycin  (ISO)
hyaluronic acid  (ISO)
hydrogen peroxide  (ISO)
ivermectin  (ISO)
kojic acid  (ISO)
methamphetamine  (ISO)
methimazole  (ISO)
methylmercury chloride  (ISO)
microcystin-LR  (EXP)
nickel atom  (ISO)
ozone  (ISO)
p-toluidine  (ISO)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (ISO)
phenobarbital  (EXP)
pirinixic acid  (EXP,ISO)
potassium dichromate  (ISO)
propiconazole  (EXP)
pyrogallol  (EXP)
raloxifene  (ISO)
resveratrol  (EXP,ISO)
rotenone  (ISO)
SB 431542  (ISO)
sodium arsenite  (ISO)
sodium dichromate  (ISO)
sodium fluoride  (EXP)
sulfadimethoxine  (ISO)
testosterone enanthate  (ISO)
tetrachloromethane  (EXP)
thapsigargin  (ISO)
theophylline  (ISO)
thimerosal  (ISO)
thioacetamide  (ISO)
trichloroethene  (ISO)
tunicamycin  (EXP)
valproic acid  (EXP,ISO)
vancomycin  (EXP)
vinclozolin  (ISO)
vorinostat  (ISO)

References

References - curated
# Reference Title Reference Citation
1. Photoreceptor signaling: supporting vision across a wide range of light intensities. Arshavsky VY and Burns ME, J Biol Chem. 2012 Jan 13;287(3):1620-6. Epub 2011 Nov 10.
2. Positional cloning of the mouse saccharin preference (Sac) locus. Bachmanov AA, etal., Chem Senses 2001 Sep;26(7):925-33.
3. Gene structure and chromosomal localization of the mouse homologue of rat OX40 protein. Birkeland ML, etal., Eur J Immunol 1995 Apr;25(4):926-30.
4. Full spectrum of clonal haematopoiesis-driver mutations in chronic heart failure and their associations with mortality. Kiefer KC, etal., ESC Heart Fail. 2021 Jun;8(3):1873-1884. doi: 10.1002/ehf2.13297. Epub 2021 Mar 28.
5. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, etal., Development 2000 Apr;127(8):1737-49.
6. Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome. Ko MS, etal., Hum Mol Genet 1998 Nov;7(12):1967-78.
7. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
8. MGDs mouse GO annotations MGD data from the GO Consortium
9. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
10. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
11. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
12. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
13. Mouse MP Annotation Import Pipeline RGD automated import pipeline
14. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
15. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
16. Large-scale screen for genes involved in gonad development. Wertz K and Herrmann BG, Mech Dev 2000 Nov;98(1-2):51-70.
Additional References at PubMed
PMID:1540129   PMID:1543505   PMID:1572642   PMID:2328987   PMID:2902634   PMID:7590745   PMID:7774930   PMID:7972043   PMID:8001974   PMID:8199413   PMID:8415697   PMID:8550614  
PMID:8663016   PMID:8858601   PMID:8889548   PMID:8917111   PMID:9250857   PMID:9733924   PMID:10349636   PMID:10570481   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851  
PMID:11319557   PMID:11685543   PMID:11812828   PMID:11913780   PMID:12180136   PMID:12359736   PMID:12477932   PMID:12520002   PMID:12551930   PMID:12802257   PMID:14610273   PMID:14712229  
PMID:14742685   PMID:15146195   PMID:15163632   PMID:15489334   PMID:15782199   PMID:16099817   PMID:16110338   PMID:16141072   PMID:16141073   PMID:16221676   PMID:16565360   PMID:16783646  
PMID:17110384   PMID:17167406   PMID:17634366   PMID:17967808   PMID:18045877   PMID:18367617   PMID:18462949   PMID:18563486   PMID:18614564   PMID:18799693   PMID:19723622   PMID:19805139  
PMID:19917775   PMID:20114047   PMID:20186915   PMID:20525682   PMID:20547679   PMID:21052544   PMID:21247419   PMID:21632928   PMID:21677750   PMID:21812758   PMID:21873635   PMID:22065575  
PMID:22083510   PMID:22586107   PMID:22794259   PMID:23209302   PMID:23288843   PMID:23704327   PMID:23716657   PMID:23761911   PMID:23954591   PMID:24367558   PMID:25044020   PMID:25093805  
PMID:25131634   PMID:26496610   PMID:27008858   PMID:27074662   PMID:27507650   PMID:28190767   PMID:28334111   PMID:28378742   PMID:28615442   PMID:28634551   PMID:28671696   PMID:28706196  
PMID:29382714   PMID:30196744   PMID:30550785   PMID:30562941   PMID:30777924   PMID:30783011   PMID:32098917   PMID:32325033   PMID:32332099   PMID:32581705   PMID:32928505   PMID:33378226  
PMID:34932372   PMID:36293380   PMID:36808153   PMID:37275776   PMID:38187761   PMID:38355793  


Genomics

Comparative Map Data
Gnb1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394155,575,514 - 155,643,726 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4155,575,818 - 155,643,726 (+)EnsemblGRCm39 Ensembl
GRCm384155,491,300 - 155,559,269 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4155,491,361 - 155,559,269 (+)EnsemblGRCm38mm10GRCm38
MGSCv374154,865,470 - 154,933,378 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364154,335,170 - 154,401,618 (+)NCBIMGSCv36mm8
Celera4157,766,104 - 157,834,163 (+)NCBICelera
Cytogenetic Map4E2NCBI
cM Map486.17NCBI
GNB1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3811,785,286 - 1,891,087 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl11,785,285 - 1,892,292 (-)EnsemblGRCh38hg38GRCh38
GRCh3711,716,725 - 1,822,526 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3611,706,589 - 1,812,355 (-)NCBINCBI36Build 36hg18NCBI36
Build 3411,748,891 - 1,854,657NCBI
Celera1824,442 - 878,396 (+)NCBICelera
Cytogenetic Map1p36.33NCBI
HuRef1993,370 - 1,099,481 (-)NCBIHuRef
CHM1_111,703,768 - 1,809,545 (-)NCBICHM1_1
T2T-CHM13v2.011,219,664 - 1,325,475 (-)NCBIT2T-CHM13v2.0
Gnb1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85171,357,778 - 171,424,489 (+)NCBIGRCr8
mRatBN7.25166,075,508 - 166,142,223 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5166,075,629 - 166,142,124 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5168,801,104 - 168,845,812 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05170,622,525 - 170,667,219 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05170,585,062 - 170,629,767 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05172,914,025 - 172,981,403 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5172,934,990 - 172,979,986 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05176,388,373 - 176,456,527 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45172,341,135 - 172,386,772 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15172,366,363 - 172,398,680 (+)NCBI
Celera5164,297,726 - 164,342,470 (+)NCBICelera
Cytogenetic Map5q36NCBI
Gnb1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554869,165,850 - 9,193,066 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554869,165,850 - 9,192,306 (+)NCBIChiLan1.0ChiLan1.0
GNB1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21226,384,861 - 226,491,117 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11225,040,769 - 225,147,102 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01490,415 - 596,826 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.111,647,764 - 1,753,106 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl11,647,340 - 1,701,614 (-)Ensemblpanpan1.1panPan2
GNB1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1556,777,854 - 56,879,619 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl556,779,354 - 56,817,295 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha556,854,797 - 56,892,482 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0556,979,770 - 57,081,319 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl556,979,770 - 57,081,208 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1556,971,985 - 57,009,669 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0556,864,386 - 56,902,053 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0557,254,317 - 57,292,011 (-)NCBIUU_Cfam_GSD_1.0
Gnb1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505827,911,024 - 27,981,551 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367371,524,325 - 1,555,102 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367371,518,855 - 1,554,926 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GNB1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl663,867,158 - 63,952,505 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1663,867,155 - 63,957,514 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
GNB1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120129,654,890 - 129,765,765 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl20129,707,085 - 129,766,667 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605434,071,639 - 34,168,179 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gnb1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248187,936,932 - 8,003,433 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248187,937,061 - 8,002,798 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Gnb1
2725 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3068
Count of miRNA genes:580
Interacting mature miRNAs:719
Transcripts:ENSMUST00000030940, ENSMUST00000105616, ENSMUST00000165335, ENSMUST00000175688, ENSMUST00000175705, ENSMUST00000176308, ENSMUST00000176411, ENSMUST00000176637, ENSMUST00000177094
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11567249Elorr3_methanol induced loss of righting response 3 (mouse)43722677156268235Mouse
26884437Sklq13_mskull length QTL 13, 16 week (mouse)457700000155684457Mouse
10755531Lymph3_mlymphocyte differential 3 (mouse)4124553483156860686Mouse
1300858Tafat_mtally ho associated mesenteric fat pad weight (mouse)Not determined4124621281156860686Mouse
4142139Adip12_madiposity 12 (mouse)Not determined4124621281156860686Mouse
1301982Pltiq1_mphospholipid transfer protein inducibility QTL 1 (mouse)Not determined4124621281156860686Mouse
1300933Cdcs9_mcytokine deficiency colitis susceptibility 9 (mouse)Not determined4125230872156860686Mouse
1300621Tpnr1_mthermal pain response 1 (mouse)Not determined4125230872156860686Mouse
10045620Heal22_mwound healing/regeneration 22 (mouse)Not determined4125230872156860686Mouse
11533916Mts1_mmammary tumor susceptibility 1 (mouse)4125289325156860686Mouse
10043996Gct5_mgranulosa cell tumorigenesis 5 (mouse)Not determined4127784226156860686Mouse
4142481Gct1_mgranulosa cell tumorigenesis 1 (mouse)Not determined4127784226156860686Mouse
1300874Gasa2_mgastritis type A susceptibility locus 2 (mouse)Not determined4133010494156860686Mouse
4142077Ignpq2_mIgA nephropathy QTL 2 (mouse)Not determined4133676733156860686Mouse
1301108Scon2_msucrose consumption 2 (mouse)Not determined4134654451156860686Mouse
1300537Ap3q_malcohol preference 3 QTL (mouse)Not determined4134654451156860686Mouse
1300780Cocrb16_mcocaine related behavior 16 (mouse)Not determined4138943725156860686Mouse

Markers in Region
RH127715  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm384155,558,885 - 155,559,097UniSTSGRCm38
MGSCv374154,932,994 - 154,933,206UniSTSGRCm37
Celera4157,833,779 - 157,833,991UniSTS
Cytogenetic Map4E2UniSTS
cM Map479.4UniSTS
Gnb1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map4E2UniSTS
cM Map479.4UniSTS
RH124831  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm384155,559,047 - 155,559,212UniSTSGRCm38
MGSCv374154,933,156 - 154,933,321UniSTSGRCm37
Celera4157,833,941 - 157,834,106UniSTS
Cytogenetic Map4E2UniSTS
cM Map479.4UniSTS
UniSTS:236533  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm384155,535,418 - 155,535,786UniSTSGRCm38
MGSCv374154,909,527 - 154,909,895UniSTSGRCm37
Celera4157,810,306 - 157,810,674UniSTS
Cytogenetic Map4E2UniSTS
cM Map479.4UniSTS
RH126184  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm384155,558,215 - 155,558,463UniSTSGRCm38
MGSCv374154,932,324 - 154,932,572UniSTSGRCm37
Celera4157,833,104 - 157,833,352UniSTS
Cytogenetic Map4E2UniSTS
cM Map479.4UniSTS
Whitehead/MRC_RH42002.13UniSTS
AA900898  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381496,699,838 - 96,700,035UniSTSGRCm38
GRCm384155,557,696 - 155,557,899UniSTSGRCm38
MGSCv374154,931,805 - 154,932,008UniSTSGRCm37
MGSCv371497,099,057 - 97,099,254UniSTSGRCm37
Celera1495,334,326 - 95,334,523UniSTS
Celera4157,832,593 - 157,832,796UniSTS
Cytogenetic Map4E2UniSTS
cM Map479.4UniSTS
PMC197251P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm384155,553,397 - 155,555,055UniSTSGRCm38
MGSCv374154,927,506 - 154,929,164UniSTSGRCm37
Celera4157,828,294 - 157,829,952UniSTS
Cytogenetic Map4E2UniSTS
cM Map479.4UniSTS
Gnb1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map4E2UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001160016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001160017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001420967 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001420968 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001420969 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001420970 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001420971 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_008142 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_185220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_185221 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_185222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_185223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017319977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB042854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB066210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB099528 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB246709 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB246710 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK156101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK177167 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK177796 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK178125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK180196 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK180796 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK180913 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK182351 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK183524 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK187165 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188778 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK190349 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK191980 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK194739 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK198923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK199789 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK200062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK203879 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213242 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217766 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK219535 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL627405 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL670227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC003294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC013058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BG807492 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OU667069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U29055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X62634 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000030940   ⟹   ENSMUSP00000030940
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4155,575,827 - 155,643,726 (+)Ensembl
GRCm38.p6 Ensembl4155,491,370 - 155,559,269 (+)Ensembl
RefSeq Acc Id: ENSMUST00000105616   ⟹   ENSMUSP00000101241
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4155,575,821 - 155,643,726 (+)Ensembl
GRCm38.p6 Ensembl4155,491,364 - 155,559,269 (+)Ensembl
RefSeq Acc Id: ENSMUST00000165335   ⟹   ENSMUSP00000130123
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4155,575,818 - 155,643,726 (+)Ensembl
GRCm38.p6 Ensembl4155,491,361 - 155,559,269 (+)Ensembl
RefSeq Acc Id: ENSMUST00000175688
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4155,607,093 - 155,625,671 (+)Ensembl
GRCm38.p6 Ensembl4155,522,636 - 155,541,214 (+)Ensembl
RefSeq Acc Id: ENSMUST00000175705
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4155,627,385 - 155,639,662 (+)Ensembl
GRCm38.p6 Ensembl4155,542,928 - 155,555,205 (+)Ensembl
RefSeq Acc Id: ENSMUST00000176308
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4155,637,681 - 155,642,110 (+)Ensembl
GRCm38.p6 Ensembl4155,553,224 - 155,557,653 (+)Ensembl
RefSeq Acc Id: ENSMUST00000176411   ⟹   ENSMUSP00000135769
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4155,577,366 - 155,627,544 (+)Ensembl
GRCm38.p6 Ensembl4155,492,909 - 155,543,087 (+)Ensembl
RefSeq Acc Id: ENSMUST00000176637   ⟹   ENSMUSP00000135091
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4155,611,910 - 155,643,724 (+)Ensembl
GRCm38.p6 Ensembl4155,527,453 - 155,559,267 (+)Ensembl
RefSeq Acc Id: ENSMUST00000177094   ⟹   ENSMUSP00000135492
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4155,606,919 - 155,639,593 (+)Ensembl
GRCm38.p6 Ensembl4155,522,462 - 155,555,136 (+)Ensembl
RefSeq Acc Id: NM_001160016   ⟹   NP_001153488
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394155,575,820 - 155,643,726 (+)NCBI
GRCm384155,491,361 - 155,559,269 (+)ENTREZGENE
MGSCv374154,865,470 - 154,933,378 (+)RGD
Celera4157,766,104 - 157,834,163 (+)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001160017   ⟹   NP_001153489
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394155,575,820 - 155,643,726 (+)NCBI
GRCm384155,491,361 - 155,559,269 (+)ENTREZGENE
MGSCv374154,865,470 - 154,933,378 (+)RGD
Celera4157,766,104 - 157,834,163 (+)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001420967   ⟹   NP_001407896
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394155,575,514 - 155,642,274 (+)NCBI
RefSeq Acc Id: NM_001420968   ⟹   NP_001407897
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394155,579,680 - 155,643,726 (+)NCBI
RefSeq Acc Id: NM_001420969   ⟹   NP_001407898
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394155,579,680 - 155,643,726 (+)NCBI
RefSeq Acc Id: NM_001420970   ⟹   NP_001407899
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394155,579,680 - 155,643,726 (+)NCBI
RefSeq Acc Id: NM_001420971   ⟹   NP_001407900
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394155,579,680 - 155,643,726 (+)NCBI
RefSeq Acc Id: NM_008142   ⟹   NP_032168
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394155,575,820 - 155,643,726 (+)NCBI
GRCm384155,491,361 - 155,559,269 (+)ENTREZGENE
MGSCv374154,865,470 - 154,933,378 (+)RGD
Celera4157,766,104 - 157,834,163 (+)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_185220
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394155,576,643 - 155,643,726 (+)NCBI
RefSeq Acc Id: NR_185221
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394155,576,643 - 155,643,726 (+)NCBI
RefSeq Acc Id: NR_185222
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394155,576,643 - 155,643,726 (+)NCBI
RefSeq Acc Id: NR_185223
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394155,576,643 - 155,643,726 (+)NCBI
RefSeq Acc Id: XM_017319977   ⟹   XP_017175466
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394155,575,757 - 155,643,726 (+)NCBI
GRCm384155,491,300 - 155,559,269 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001153488 (Get FASTA)   NCBI Sequence Viewer  
  NP_001153489 (Get FASTA)   NCBI Sequence Viewer  
  NP_001407896 (Get FASTA)   NCBI Sequence Viewer  
  NP_001407897 (Get FASTA)   NCBI Sequence Viewer  
  NP_001407898 (Get FASTA)   NCBI Sequence Viewer  
  NP_001407899 (Get FASTA)   NCBI Sequence Viewer  
  NP_001407900 (Get FASTA)   NCBI Sequence Viewer  
  NP_032168 (Get FASTA)   NCBI Sequence Viewer  
  XP_017175466 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAC52905 (Get FASTA)   NCBI Sequence Viewer  
  AAH13058 (Get FASTA)   NCBI Sequence Viewer  
  BAB63904 (Get FASTA)   NCBI Sequence Viewer  
  BAE33588 (Get FASTA)   NCBI Sequence Viewer  
  BAE37515 (Get FASTA)   NCBI Sequence Viewer  
  BAE75861 (Get FASTA)   NCBI Sequence Viewer  
  BAE75862 (Get FASTA)   NCBI Sequence Viewer  
  CAA44500 (Get FASTA)   NCBI Sequence Viewer  
  CAG9553587 (Get FASTA)   NCBI Sequence Viewer  
  EDL15010 (Get FASTA)   NCBI Sequence Viewer  
  EDL15011 (Get FASTA)   NCBI Sequence Viewer  
  EDL15012 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000030940
  ENSMUSP00000030940.8
  ENSMUSP00000101241
  ENSMUSP00000101241.4
  ENSMUSP00000130123
  ENSMUSP00000130123.2
  ENSMUSP00000135091
  ENSMUSP00000135091.2
  ENSMUSP00000135492.2
  ENSMUSP00000135769.2
GenBank Protein P62874 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_032168   ⟸   NM_008142
- UniProtKB: P62874 (UniProtKB/Swiss-Prot),   Q3TQ70 (UniProtKB/TrEMBL),   Q3U1B1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001153488   ⟸   NM_001160016
- UniProtKB: P62874 (UniProtKB/Swiss-Prot),   Q3TQ70 (UniProtKB/TrEMBL),   Q3U1B1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001153489   ⟸   NM_001160017
- UniProtKB: P62874 (UniProtKB/Swiss-Prot),   Q3TQ70 (UniProtKB/TrEMBL),   Q3U1B1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017175466   ⟸   XM_017319977
- Peptide Label: isoform X1
- UniProtKB: P62874 (UniProtKB/Swiss-Prot),   Q3TQ70 (UniProtKB/TrEMBL),   Q3U1B1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000101241   ⟸   ENSMUST00000105616
RefSeq Acc Id: ENSMUSP00000135492   ⟸   ENSMUST00000177094
RefSeq Acc Id: ENSMUSP00000130123   ⟸   ENSMUST00000165335
RefSeq Acc Id: ENSMUSP00000030940   ⟸   ENSMUST00000030940
RefSeq Acc Id: ENSMUSP00000135769   ⟸   ENSMUST00000176411
RefSeq Acc Id: ENSMUSP00000135091   ⟸   ENSMUST00000176637
RefSeq Acc Id: NP_001407896   ⟸   NM_001420967
- UniProtKB: P62874 (UniProtKB/Swiss-Prot),   Q3TQ70 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001407897   ⟸   NM_001420968
- UniProtKB: P62874 (UniProtKB/Swiss-Prot),   Q3TQ70 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001407898   ⟸   NM_001420969
- UniProtKB: P62874 (UniProtKB/Swiss-Prot),   Q3TQ70 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001407899   ⟸   NM_001420970
- UniProtKB: P62874 (UniProtKB/Swiss-Prot),   Q3TQ70 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001407900   ⟸   NM_001420971
- UniProtKB: P62874 (UniProtKB/Swiss-Prot),   Q3TQ70 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P62874-F1-model_v2 AlphaFold P62874 1-340 view protein structure

Promoters
RGD ID:6835425
Promoter ID:MM_KWN:41151
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   Lung,   MEF_B6
Transcripts:UC008WDS.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv364154,900,576 - 154,901,527 (+)MPROMDB
RGD ID:6847810
Promoter ID:MM_ACW:36818
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   BoneMarrow_4Hour,   MEF_B6
Transcripts:GNB1.ESEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv364154,917,041 - 154,917,541 (+)MPROMDB
RGD ID:6847811
Promoter ID:MM_ACW:36819
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_4Hour,   Kidney
Transcripts:GNB1.FSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv364154,927,234 - 154,927,734 (+)MPROMDB
RGD ID:6885778
Promoter ID:EPDNEW_M6340
Type:initiation region
Name:Gnb1_1
Description:Mus musculus guanine nucleotide binding protein , beta 1 , transcriptvariant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M6341  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm384155,491,379 - 155,491,439EPDNEW
RGD ID:6885792
Promoter ID:EPDNEW_M6341
Type:initiation region
Name:Gnb1_2
Description:Mus musculus guanine nucleotide binding protein , beta 1 , transcriptvariant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M6340  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm384155,522,586 - 155,522,646EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:95781 AgrOrtholog
Ensembl Genes ENSMUSG00000029064 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000030940 ENTREZGENE
  ENSMUST00000030940.14 UniProtKB/Swiss-Prot
  ENSMUST00000105616 ENTREZGENE
  ENSMUST00000105616.10 UniProtKB/Swiss-Prot
  ENSMUST00000165335 ENTREZGENE
  ENSMUST00000165335.8 UniProtKB/Swiss-Prot
  ENSMUST00000176411.8 UniProtKB/TrEMBL
  ENSMUST00000176637 ENTREZGENE
  ENSMUST00000176637.2 UniProtKB/Swiss-Prot
  ENSMUST00000177094.8 UniProtKB/TrEMBL
Gene3D-CATH 2.130.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro G-protein_beta_WD-40_rep UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Gprotein_B UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Guanine_nucleotide-bd_bsu UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40/YVTN_repeat-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:14688 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:95781 ENTREZGENE
NCBI Gene 14688 ENTREZGENE
PANTHER GUANINE NUCLEOTIDE-BINDING PROTEIN G(I)/G(S)/G(T) SUBUNIT BETA-1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR19850 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam WD40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Gnb1 PhenoGen
PIRSF GN-bd_beta UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS GPROTEINB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPROTEINBRPT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE WD_REPEATS_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD_REPEATS_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD_REPEATS_REGION UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART WD40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF50978 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt GBB1_MOUSE UniProtKB/Swiss-Prot
  H3BKR2_MOUSE UniProtKB/TrEMBL
  H3BLF7_MOUSE UniProtKB/TrEMBL
  P62874 ENTREZGENE
  Q3TQ70 ENTREZGENE, UniProtKB/TrEMBL
  Q3U1B1 ENTREZGENE, UniProtKB/TrEMBL
  Q61621_MOUSE UniProtKB/TrEMBL
UniProt Secondary P04697 UniProtKB/Swiss-Prot
  P04901 UniProtKB/Swiss-Prot