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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal palatine bone horizontal plate morphology
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Accession:MP:0004537 term browser browse the term
Definition:any structural anomaly of the bony plate of the palatine bone that normally fuses with maxillary shelf to form secondary (hard) palate
Synonyms:exact_synonym: abnormal horizontal plate;   abnormal palatal process of palatine bone;   abnormal palatine palatal process;   abnormal palatine shelf morphology


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abnormal palatine bone horizontal plate morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G E330023G01Rik RIKEN cDNA E330023G01 gene IAGP MGI PMID:24565867 NCBI chr 9:98,630,652...98,702,140
Ensembl chr 9:98,630,652...98,702,140 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 IAGP MGI PMID:20503384 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 IAGP MGI PMID:19086028 NCBI chr 5:33,879,068...33,894,412
Ensembl chr 5:33,879,018...33,894,412 		JBrowse link
G Foxc2 forkhead box C2 IAGP MGI PMID:9409679 NCBI chr 8:121,842,910...121,845,634
Ensembl chr 8:121,842,910...121,845,634 		JBrowse link
G Foxf2 forkhead box F2 IAGP MGI PMID:12812790 NCBI chr13:31,809,686...31,815,390
Ensembl chr13:31,809,799...31,815,386 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 IAGP MGI PMID:11978771 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G H2az2 H2A.Z histone variant 2 IAGP MGI PMID:17610273 NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443 		JBrowse link
G Irf6 interferon regulatory factor 6 IAGP MGI PMID:20196077 NCBI chr 1:192,835,420...192,854,344
Ensembl chr 1:192,835,419...192,854,331 		JBrowse link
G Pax9 paired box 9 IAGP MGI PMID:17610273 NCBI chr12:56,738,478...56,759,609
Ensembl chr12:56,738,552...56,759,607 		JBrowse link
G Pdss2 prenyl (solanesyl) diphosphate synthase, subunit 2 IAGP MGI PMID:21871565 NCBI chr10:43,095,396...43,340,878
Ensembl chr10:43,097,482...43,340,878 		JBrowse link
absent palatine bone horizontal plate term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid5b AT-rich interaction domain 5B IAGP MGI PMID:17143286 NCBI chr10:67,928,353...68,114,596
Ensembl chr10:67,928,350...68,114,570 		JBrowse link
G Cyp51 cytochrome P450, family 51 IAGP MGI PMID:21705796 NCBI chr 5:4,130,674...4,154,697
Ensembl chr 5:4,131,145...4,154,746 		JBrowse link
G Dlx2 distal-less homeobox 2 IAGP MGI PMID:9187081 NCBI chr 2:71,373,752...71,377,095
Ensembl chr 2:71,373,752...71,377,098 		JBrowse link
G Dlx5 distal-less homeobox 5 IAGP MGI PMID:10433909 NCBI chr 6:6,877,801...6,882,068
Ensembl chr 6:6,877,805...6,882,085 		JBrowse link
G E2f1 E2F transcription factor 1 IAGP MGI PMID:31241461 NCBI chr 2:154,401,320...154,411,812
Ensembl chr 2:154,401,327...154,411,812 		JBrowse link
G Ednrb endothelin receptor type B IAGP MGI PMID:17693063 NCBI chr14:104,052,055...104,081,764
Ensembl chr14:104,052,061...104,081,838 		JBrowse link
G Foxc2 forkhead box C2 IAGP MGI PMID:9106663 NCBI chr 8:121,842,910...121,845,634
Ensembl chr 8:121,842,910...121,845,634 		JBrowse link
G Foxf2 forkhead box F2 IAGP MGI PMID:12812790 NCBI chr13:31,809,686...31,815,390
Ensembl chr13:31,809,799...31,815,386 		JBrowse link
G Gli2 GLI-Kruppel family member GLI2 IAGP MGI PMID:9006072 NCBI chr 1:118,761,791...118,987,578
Ensembl chr 1:118,761,862...118,981,349 		JBrowse link
G H2az2 H2A.Z histone variant 2 IAGP MGI PMID:29727702 PMID:32169905 PMID:34184034 NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443 		JBrowse link
G Jag2 jagged 2 IAGP MGI PMID:9531541 NCBI chr12:112,871,439...112,893,437
Ensembl chr12:112,871,439...112,893,396 		JBrowse link
G Kcnj13 potassium inwardly-rectifying channel, subfamily J, member 13 IAGP MGI PMID:26402555 NCBI chr 1:87,312,299...87,322,451
Ensembl chr 1:87,314,085...87,322,451 		JBrowse link
G Meis2 Meis homeobox 2 IAGP MGI PMID:32169905 NCBI chr 2:115,691,745...115,897,925
Ensembl chr 2:115,693,545...115,896,320 		JBrowse link
G Memo1 mediator of cell motility 1 IAGP MGI PMID:26746790 NCBI chr17:74,493,759...74,602,677
Ensembl chr17:74,506,031...74,602,516 		JBrowse link
G Msx1 msh homeobox 1 IAGP MGI PMID:7914451 NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927 		JBrowse link
G Pax3 paired box 3 IAGP MGI PMID:31241461 NCBI chr 1:78,077,904...78,173,773
Ensembl chr 1:78,077,904...78,173,771 		JBrowse link
G Pax9 paired box 9 IAGP MGI PMID:9732271 NCBI chr12:56,738,478...56,759,609
Ensembl chr12:56,738,552...56,759,607 		JBrowse link
G Prmt1 protein arginine N-methyltransferase 1 IAGP MGI PMID:29727702 NCBI chr 7:44,626,179...44,635,844
Ensembl chr 7:44,625,413...44,635,992 		JBrowse link
G Prrx1 paired related homeobox 1 IAGP MGI PMID:7758948 NCBI chr 1:163,072,688...163,142,714
Ensembl chr 1:163,072,688...163,141,279 		JBrowse link
G Rbfox2 RNA binding protein, fox-1 homolog (C. elegans) 2 IAGP MGI PMID:31241461 NCBI chr15:76,963,190...77,193,058
Ensembl chr15:76,963,190...77,191,204 		JBrowse link
G Srsf3 serine and arginine-rich splicing factor 3 IAGP MGI PMID:34184034 NCBI chr17:29,251,634...29,262,346
Ensembl chr17:29,251,602...29,262,347 		JBrowse link
G Vax1 ventral anterior homeobox 1 IAGP MGI PMID:28771384 NCBI chr19:59,152,912...59,158,829
Ensembl chr19:59,154,619...59,158,488 		JBrowse link
G Zfp950 zinc finger protein 950 IAGP MGI PMID:17143286 NCBI chr19:61,042,692...61,129,297
Ensembl chr19:61,042,278...61,129,278 		JBrowse link
decreased palatine bone horizontal plate size term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid5b AT-rich interaction domain 5B IAGP MGI PMID:17143286 NCBI chr10:67,928,353...68,114,596
Ensembl chr10:67,928,350...68,114,570 		JBrowse link
G Csrnp1 cysteine-serine-rich nuclear protein 1 IAGP MGI PMID:17143286 NCBI chr 9:119,800,229...119,813,808
Ensembl chr 9:119,800,229...119,813,724 		JBrowse link
G E2f1 E2F transcription factor 1 IAGP MGI PMID:25053435 NCBI chr 2:154,401,320...154,411,812
Ensembl chr 2:154,401,327...154,411,812 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 IAGP MGI PMID:10471511 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459 		JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:31300413 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 IAGP MGI PMID:25053435 NCBI chr11:57,719,539...57,722,973
Ensembl chr11:57,719,531...57,723,644 		JBrowse link
G Rdh10 retinol dehydrogenase 10 (all-trans) IAGP MGI PMID:31300413 NCBI chr 1:16,176,106...16,202,774
Ensembl chr 1:16,175,998...16,203,958 		JBrowse link
G Rspo2 R-spondin 2 IAGP MGI PMID:19233133 NCBI chr15:42,884,184...43,034,990
Ensembl chr15:42,884,190...43,034,222 		JBrowse link
G Schip1 schwannomin interacting protein 1 IAGP MGI PMID:17143286 NCBI chr 3:67,972,135...68,533,815
Ensembl chr 3:67,972,135...68,533,814 		JBrowse link
G Sgpl1 sphingosine phosphate lyase 1 IAGP MGI PMID:17143286 NCBI chr10:60,934,421...60,983,463
Ensembl chr10:60,934,421...60,983,482 		JBrowse link
G Tbx22 T-box 22 IAGP MGI PMID:19648291 NCBI chr  X:106,711,570...106,732,586
Ensembl chr  X:106,711,570...106,732,584 		JBrowse link
G Tiparp TCDD-inducible poly(ADP-ribose) polymerase IAGP MGI PMID:17143286 NCBI chr 3:65,435,868...65,462,939
Ensembl chr 3:65,435,831...65,462,939 		JBrowse link
G Wdr19 WD repeat domain 19 IAGP MGI PMID:22228095 NCBI chr 5:65,357,039...65,417,758
Ensembl chr 5:65,357,039...65,417,758 		JBrowse link
G Zfp640 zinc finger protein 640 IAGP MGI PMID:17143286 NCBI chr13:66,817,010...66,828,867
Ensembl chr13:66,817,992...66,821,393 		JBrowse link
G Zfp950 zinc finger protein 950 IAGP MGI PMID:17143286 NCBI chr19:61,042,692...61,129,297
Ensembl chr19:61,042,278...61,129,278 		JBrowse link
palatine bone horizontal plate hypoplasia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc42 cell division cycle 42 IAGP MGI PMID:28326341 NCBI chr 4:137,047,011...137,085,007
Ensembl chr 4:137,047,007...137,085,031 		JBrowse link
G H2az2 H2A.Z histone variant 2 IAGP MGI PMID:26746790 PMID:35212626 NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443 		JBrowse link
G Kdm6b KDM1 lysine (K)-specific demethylase 6B IAGP MGI PMID:35212626 NCBI chr11:69,289,334...69,311,188
Ensembl chr11:69,289,334...69,304,501 		JBrowse link
G Memo1 mediator of cell motility 1 IAGP MGI PMID:26746790 NCBI chr17:74,493,759...74,602,677
Ensembl chr17:74,506,031...74,602,516 		JBrowse link
G Mn1 meningioma 1 IAGP MGI PMID:15870292 NCBI chr 5:111,565,145...111,604,890
Ensembl chr 5:111,565,228...111,604,899 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16756
    craniofacial phenotype 1621
      abnormal craniofacial morphology 1621
        abnormal craniofacial bone morphology 1028
          abnormal palate bone morphology 86
            abnormal palatine bone horizontal plate morphology 44
              absent palatine bone horizontal plate 23
              decreased palatine bone horizontal plate size + 20
Path 2
Term Annotations click to browse term
  mammalian phenotype 16756
    growth/size/body region phenotype 6948
      abnormal head morphology 1331
        abnormal facial morphology 1086
          abnormal mouth morphology 802
            abnormal palate morphology 447
              abnormal secondary palate morphology 236
                abnormal hard palate morphology 109
                  abnormal palate bone morphology 86
                    abnormal palatine bone horizontal plate morphology 44
                      absent palatine bone horizontal plate 23
                      decreased palatine bone horizontal plate size + 20
paths to the root