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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal nasal cartilage morphology
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Accession:MP:0031449 term browser browse the term
Definition:any structural abnormality of any of the cartilaginous elements formed from hyaline cartilage that provide form and support to the nose


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abnormal nasal cartilage morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alx1 ALX homeobox 1 IAGP MGI PMID:8673125 PMID:35127681 NCBI chr10:102,834,564...102,865,501
Ensembl chr10:102,834,568...102,866,076 		JBrowse link
G Bmp4 bone morphogenetic protein 4 IAGP MGI PMID:22219353 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Ccn2 cellular communication network factor 2 IAGP MGI PMID:12736220 NCBI chr10:24,471,340...24,474,581
Ensembl chr10:24,471,340...24,474,581 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 IAGP MGI PMID:6049666 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:22219353 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294 		JBrowse link
G H2az2 H2A.Z histone variant 2 IAGP MGI PMID:19541608 PMID:19706403 PMID:22219353 PMID:33155500 NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443 		JBrowse link
G Hhat hedgehog acyltransferase IAGP MGI PMID:23055936 NCBI chr 1:192,195,133...192,453,546
Ensembl chr 1:192,179,019...192,453,531 		JBrowse link
G Med23 mediator complex subunit 23 IAGP MGI PMID:33155500 NCBI chr10:24,745,889...24,789,358
Ensembl chr10:24,745,884...24,789,579 		JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 IAGP MGI PMID:19541608 NCBI chr 5:121,268,596...121,329,460
Ensembl chr 5:121,268,596...121,329,460 		JBrowse link
abnormal nasal capsule morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alx1 ALX homeobox 1 IAGP MGI PMID:8673125 NCBI chr10:102,834,564...102,865,501
Ensembl chr10:102,834,568...102,866,076 		JBrowse link
G Alx3 aristaless-like homeobox 3 IAGP MGI PMID:11641221 NCBI chr 3:107,502,347...107,513,191
Ensembl chr 3:107,502,347...107,513,092 		JBrowse link
G Alx4 aristaless-like homeobox 4 IAGP MGI PMID:11641221 NCBI chr 2:93,472,779...93,511,686
Ensembl chr 2:93,472,729...93,511,684 		JBrowse link
G Bmp7 bone morphogenetic protein 7 IAGP MGI PMID:19127565 NCBI chr 2:172,709,805...172,782,114
Ensembl chr 2:172,709,805...172,782,114 		JBrowse link
G Chuk conserved helix-loop-helix ubiquitous kinase IAGP MGI PMID:10195896 NCBI chr19:44,061,773...44,095,940
Ensembl chr19:44,061,774...44,095,919 		JBrowse link
G Ctnnb1 catenin beta 1 IAGP MGI PMID:21307168 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Dlx5 distal-less homeobox 5 IAGP MGI PMID:10433912 PMID:12434331 PMID:16330189 NCBI chr 6:6,877,801...6,882,068
Ensembl chr 6:6,877,805...6,882,085 		JBrowse link
G Dlx6 distal-less homeobox 6 IAGP MGI PMID:12434331 NCBI chr 6:6,863,272...6,867,965
Ensembl chr 6:6,863,334...6,868,568 		JBrowse link
G E2f1 E2F transcription factor 1 IAGP MGI PMID:25053435 NCBI chr 2:154,401,320...154,411,812
Ensembl chr 2:154,401,327...154,411,812 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 IAGP MGI PMID:20503384 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Foxc1 forkhead box C1 IEA MGI NCBI chr13:31,990,629...31,994,618
Ensembl chr13:31,990,616...31,996,459 		JBrowse link
G Foxg1 forkhead box G1 IAGP MGI PMID:21982646 NCBI chr12:49,429,666...49,433,650
Ensembl chr12:49,429,443...49,433,644 		JBrowse link
G Gas1 growth arrest specific 1 IAGP MGI PMID:17525797 NCBI chr13:60,322,219...60,325,179
Ensembl chr13:60,322,219...60,325,179 		JBrowse link
G Gsc goosecoid homeobox IAGP MGI PMID:7555718 NCBI chr12:104,437,468...104,439,495
Ensembl chr12:104,437,468...104,439,589 		JBrowse link
G H2az2 H2A.Z histone variant 2 IAGP MGI PMID:12490557 NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 IAGP MGI PMID:25053435 NCBI chr11:57,719,539...57,722,973
Ensembl chr11:57,719,531...57,723,644 		JBrowse link
G Msx1 msh homeobox 1 IAGP MGI PMID:16330189 NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927 		JBrowse link
G Otx2 orthodenticle homeobox 2 IAGP MGI PMID:7590242 NCBI chr14:48,894,238...48,905,101
Ensembl chr14:48,895,134...48,911,276 		JBrowse link
G Pax6 paired box 6 IAGP MGI PMID:9363853 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709 		JBrowse link
G Pax7 paired box 7 IAGP MGI PMID:8631261 NCBI chr 4:139,464,357...139,560,841
Ensembl chr 4:139,464,373...139,560,839 		JBrowse link
G Pbx1 pre B cell leukemia homeobox 1 IAGP MGI PMID:21982646 NCBI chr 1:167,946,933...168,259,898
Ensembl chr 1:167,946,933...168,259,839 		JBrowse link
G Pbx2 pre B cell leukemia homeobox 2 IAGP MGI PMID:21982646 NCBI chr17:34,811,233...34,816,374
Ensembl chr17:34,810,240...34,816,374 		JBrowse link
G Pdgfra platelet derived growth factor receptor, alpha polypeptide IAGP MGI PMID:12490557 NCBI chr 5:75,311,988...75,358,867
Ensembl chr 5:75,312,953...75,358,876 		JBrowse link
G Pkdcc protein kinase domain containing, cytoplasmic IAGP MGI PMID:19465597 NCBI chr17:83,522,708...83,532,496
Ensembl chr17:83,522,721...83,532,499 		JBrowse link
G Ptprf protein tyrosine phosphatase receptor type F IAGP MGI PMID:23863482 NCBI chr 4:118,065,410...118,148,602
Ensembl chr 4:118,065,410...118,148,602 		JBrowse link
G Ptprs protein tyrosine phosphatase receptor type S IAGP MGI PMID:23863482 NCBI chr17:56,719,426...56,783,480
Ensembl chr17:56,719,426...56,783,483 		JBrowse link
G Rara retinoic acid receptor, alpha IAGP MGI PMID:7607067 NCBI chr11:98,818,626...98,865,768
Ensembl chr11:98,818,644...98,865,768 		JBrowse link
G Rarg retinoic acid receptor, gamma IAGP MGI PMID:7607067 NCBI chr15:102,143,373...102,165,891
Ensembl chr15:102,143,373...102,165,952 		JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 IAGP MGI PMID:14745966 NCBI chr13:53,263,353...53,440,160
Ensembl chr13:53,263,348...53,440,160 		JBrowse link
G Satb2 special AT-rich sequence binding protein 2 IAGP MGI PMID:16960803 NCBI chr 1:56,833,145...57,019,350
Ensembl chr 1:56,833,140...57,017,809 		JBrowse link
G Shh sonic hedgehog IAGP MGI PMID:17525797 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Tcof1 treacle ribosome biogenesis factor 1 IAGP MGI PMID:10888597 NCBI chr18:60,946,827...60,982,055
Ensembl chr18:60,946,827...60,982,043 		JBrowse link
abnormal nasal septum cartilage morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alx1 ALX homeobox 1 IAGP MGI PMID:9847249 NCBI chr10:102,834,564...102,865,501
Ensembl chr10:102,834,568...102,866,076 		JBrowse link
G Alx4 aristaless-like homeobox 4 IAGP MGI PMID:9847249 NCBI chr 2:93,472,779...93,511,686
Ensembl chr 2:93,472,729...93,511,684 		JBrowse link
G Bmp7 bone morphogenetic protein 7 IAGP MGI PMID:19127565 NCBI chr 2:172,709,805...172,782,114
Ensembl chr 2:172,709,805...172,782,114 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 IAGP MGI PMID:20503384 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Gnas GNAS complex locus IAGP MGI PMID:26859889 NCBI chr 2:174,126,113...174,188,537
Ensembl chr 2:174,126,113...174,188,537 		JBrowse link
G H2az2 H2A.Z histone variant 2 IAGP MGI PMID:26859889 NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443 		JBrowse link
G Hhat hedgehog acyltransferase IAGP MGI PMID:14975718 NCBI chr 1:192,195,133...192,453,546
Ensembl chr 1:192,179,019...192,453,531 		JBrowse link
G Rara retinoic acid receptor, alpha IAGP MGI PMID:7607067 NCBI chr11:98,818,626...98,865,768
Ensembl chr11:98,818,644...98,865,768 		JBrowse link
G Rarg retinoic acid receptor, gamma IAGP MGI PMID:7607067 NCBI chr15:102,143,373...102,165,891
Ensembl chr15:102,143,373...102,165,952 		JBrowse link
G Tfap2a transcription factor AP-2, alpha IAGP MGI PMID:14975718 NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852 		JBrowse link
G Tmem107 transmembrane protein 107 IAGP MGI PMID:28954202 NCBI chr11:68,961,635...68,964,119
Ensembl chr11:68,961,632...68,964,119 		JBrowse link
abnormal vomeronasal cartilage morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tmem107 transmembrane protein 107 IAGP MGI PMID:28954202 NCBI chr11:68,961,635...68,964,119
Ensembl chr11:68,961,632...68,964,119 		JBrowse link
G Vax1 ventral anterior homeobox 1 IAGP MGI PMID:28771384 NCBI chr19:59,152,912...59,158,829
Ensembl chr19:59,154,619...59,158,488 		JBrowse link
absent nasal capsule term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxd3 forkhead box D3 IAGP MGI PMID:18367558 NCBI chr 4:99,544,536...99,546,908
Ensembl chr 4:99,544,536...99,546,859 		JBrowse link
G Gnas GNAS complex locus IAGP MGI PMID:26859889 NCBI chr 2:174,126,113...174,188,537
Ensembl chr 2:174,126,113...174,188,537 		JBrowse link
G H2az2 H2A.Z histone variant 2 IAGP MGI PMID:12878728 PMID:18367558 PMID:19541608 PMID:26859889 PMID:31733190 NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443 		JBrowse link
G Nubp2 nucleotide binding protein 2 IAGP MGI PMID:31733190 NCBI chr17:25,101,585...25,105,423
Ensembl chr17:25,101,585...25,105,323 		JBrowse link
G Otx2 orthodenticle homeobox 2 IAGP MGI PMID:7590242 NCBI chr14:48,894,238...48,905,101
Ensembl chr14:48,895,134...48,911,276 		JBrowse link
G Pcsk6 proprotein convertase subtilisin/kexin type 6 IAGP MGI PMID:10809672 NCBI chr 7:65,511,884...65,700,134
Ensembl chr 7:65,511,482...65,700,134 		JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 IAGP MGI PMID:19541608 NCBI chr 5:121,268,596...121,329,460
Ensembl chr 5:121,268,596...121,329,460 		JBrowse link
G Ptprf protein tyrosine phosphatase receptor type F IAGP MGI PMID:23863482 NCBI chr 4:118,065,410...118,148,602
Ensembl chr 4:118,065,410...118,148,602 		JBrowse link
G Ptprs protein tyrosine phosphatase receptor type S IAGP MGI PMID:23863482 NCBI chr17:56,719,426...56,783,480
Ensembl chr17:56,719,426...56,783,483 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 IAGP MGI PMID:12878728 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
absent nasal septum cartilage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdon cell adhesion molecule-related/down-regulated by oncogenes IAGP MGI PMID:12620190 NCBI chr 9:35,332,836...35,418,948
Ensembl chr 9:35,332,424...35,418,948 		JBrowse link
nasal cartilage hypoplasia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 IAGP MGI PMID:30459452 NCBI chr 8:68,809,433...69,188,270
Ensembl chr 8:68,809,433...69,187,798 		JBrowse link
G H2az2 H2A.Z histone variant 2 IAGP MGI PMID:33155500 NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443 		JBrowse link
G Hhat hedgehog acyltransferase IAGP MGI PMID:23055936 NCBI chr 1:192,195,133...192,453,546
Ensembl chr 1:192,179,019...192,453,531 		JBrowse link
G Med23 mediator complex subunit 23 IAGP MGI PMID:33155500 NCBI chr10:24,745,889...24,789,358
Ensembl chr10:24,745,884...24,789,579 		JBrowse link
nasal septum cartilage hypoplasia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdon cell adhesion molecule-related/down-regulated by oncogenes IAGP MGI PMID:12620190 NCBI chr 9:35,332,836...35,418,948
Ensembl chr 9:35,332,424...35,418,948 		JBrowse link
G H2az2 H2A.Z histone variant 2 IAGP MGI PMID:31733190 NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443 		JBrowse link
G Nubp2 nucleotide binding protein 2 IAGP MGI PMID:31733190 NCBI chr17:25,101,585...25,105,423
Ensembl chr17:25,101,585...25,105,323 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16883
    respiratory system phenotype 1853
      abnormal respiratory system morphology 1274
        abnormal nose morphology 283
          abnormal nasal cartilage morphology 49
            abnormal nasal capsule morphology + 38
            abnormal nasal septum cartilage morphology + 13
            abnormal vomeronasal cartilage morphology 2
            nasal cartilage hypoplasia + 6
Path 2
Term Annotations click to browse term
  mammalian phenotype 16883
    craniofacial phenotype 1638
      abnormal craniofacial morphology 1638
        abnormal facial morphology 1102
          abnormal nose morphology 283
            abnormal nasal cartilage morphology 49
              abnormal nasal capsule morphology + 38
              abnormal nasal septum cartilage morphology + 13
              abnormal vomeronasal cartilage morphology 2
              nasal cartilage hypoplasia + 6
paths to the root