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ONTOLOGY REPORT - ANNOTATIONS

Term:antigen processing and presentation of peptide antigen via MHC class I
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Accession:GO:0002474 term browser browse the term
Definition:The process in which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules.
Synonyms:exact_synonym: peptide antigen processing and presentation via MHC class I


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antigen processing and presentation of peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07044383.1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr20:3,403,777...3,436,874 JBrowse link
G AABR07044397.1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr20:2,496,605...2,497,428 JBrowse link
G Abcb9 ATP binding cassette subfamily B member 9 NOT|involved_in ISO (PMID:17977821) RGD PMID:17977821 NCBI chr12:32,499,213...32,531,932
Ensembl chr12:32,499,225...32,531,931 		JBrowse link
G ENSRNOG00000064836 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr20:2,606,621...2,618,153 JBrowse link
G ENSRNOG00000069480 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr20:3,310,825...3,421,372 JBrowse link
G Mr1 major histocompatibility complex, class I-related involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:67,298,362...67,317,985
Ensembl chr13:67,299,585...67,317,970 		JBrowse link
G RT1-CE14 RT1 class I, locus CE14 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:3,296,654...3,300,795
Ensembl chr20:3,297,196...3,305,134 		JBrowse link
G RT1-CE2 RT1 class I, locus CE2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:3,538,452...3,541,841
Ensembl chr20:3,537,809...3,541,790 		JBrowse link
G RT1-M1-5 RT1 class I, M1, gene 5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:1,858,608...1,860,708
Ensembl chr20:1,811,604...1,860,708 		JBrowse link
G RT1-O1 RT1 class Ib, locus O1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:2,655,116...2,657,520
Ensembl chr20:2,655,116...2,657,520 		JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2 microglobulin involved_in ISO
IEA		 UniProtKB:P04439 (PMID:24643698)
GO_REF:0000107		 RGD
Ensembl		 PMID:24643698 GO_REF:0000107 NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766 		JBrowse link
G Ide insulin degrading enzyme involved_in ISO
IEA
ISS		 (PMID:20364150)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:20364150 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:235,002,984...235,102,448
Ensembl chr 1:234,995,351...235,102,440 		JBrowse link
G RT1-CE16 RT1 class I, locus CE16 involved_in ISO (PMID:1402688), (PMID:20364150), (PMID:24643698) RGD PMID:1402688 PMID:20364150 PMID:24643698 NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563 		JBrowse link
G Tap1 transporter 1, ATP binding cassette subfamily B member involved_in IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
(PMID:11133832)		 Ensembl
GO_Central
RGD		 PMID:11133832 GO_REF:0000033 GO_REF:0000107 NCBI chr20:4,656,262...4,666,634
Ensembl chr20:4,656,263...4,666,901 		JBrowse link
G Tap2 transporter 2, ATP binding cassette subfamily B member involved_in
acts_upstream_of_or_within		 ISO
IDA		 (PMID:1538751), (PMID:8496691)
PMID:1758495		 RGD PMID:1538751 PMID:8496691 PMID:1758495 RGD:1299069 NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407 		JBrowse link
G Tapbp TAP binding protein involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:4,956,937...4,966,191
Ensembl chr20:4,956,937...4,966,181 		JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RT1-CE16 RT1 class I, locus CE16 involved_in ISO (PMID:8630735) RGD PMID:8630735 NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563 		JBrowse link
G Tap2 transporter 2, ATP binding cassette subfamily B member involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:1538753)		 Ensembl
RGD		 PMID:1538753 GO_REF:0000107 NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407 		JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07000137.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 1:1,307,185...1,308,310 JBrowse link
G AABR07000147.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G AABR07001348.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 1:39,668,472...39,670,153 JBrowse link
G H60al histocompatibility 60a like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:1,382,896...1,386,846 JBrowse link
G Hfe homeostatic iron regulator involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:41,413,451...41,421,502
Ensembl chr17:41,413,451...41,421,502 		JBrowse link
G Micb MHC class I polypeptide-related sequence B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:78,495,779...78,513,030
Ensembl chr 1:78,495,779...78,512,827 		JBrowse link
G Mill1 MHC I like leukocyte 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:78,372,798...78,398,932
Ensembl chr 1:78,372,802...78,398,930 		JBrowse link
G Raet1l retinoic acid early transcript 1L involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:1,979,433...1,984,410
Ensembl chr 1:1,979,443...1,984,410 		JBrowse link
G RT1-A RT1 class I, locus A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G RT1-A2 RT1 class Ia, locus A2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,870,939...4,910,183 JBrowse link
G RT1-CE1 RT1 class I, locus1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,555,779...3,559,487
Ensembl chr20:3,555,782...3,559,486 		JBrowse link
G RT1-CE10 RT1 class I, locus CE10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,377,284...3,380,301 JBrowse link
G RT1-CE11 RT1 class I, locus CE11 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,355,393...3,358,520
Ensembl chr20:3,350,937...3,380,362 		JBrowse link
G RT1-CE16 RT1 class I, locus CE16 involved_in ISO (PMID:22031944) RGD PMID:22031944 NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563 		JBrowse link
G RT1-CE3 RT1 class I, locus CE3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,516,647...3,520,938
Ensembl chr20:2,623,953...2,692,081 		JBrowse link
G RT1-M2 RT1 class Ib, locus M2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:978,918...981,510
Ensembl chr20:978,935...981,723 		JBrowse link
G RT1-M3-1 RT1 class Ib, locus M3, gene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,323,976...1,328,126
Ensembl chr20:1,287,521...1,328,117 		JBrowse link
G RT1-M5 RT1 class Ib, locus M5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,546,496...1,548,948
Ensembl chr20:1,546,511...1,548,775 		JBrowse link
G RT1-M6-2 RT1 class I, locus M6, gene 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,583,267...1,587,099
Ensembl chr20:1,583,299...1,586,215 		JBrowse link
G RT1-N1 RT1 class Ib, locus N1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G RT1-N2 RT1 class Ib, locus N2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,641,157...2,645,439
Ensembl chr20:2,641,202...2,644,900 		JBrowse link
G RT1-N3 RT1 class Ib, locus N3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,659,132...2,665,536
Ensembl chr20:2,661,584...2,665,530 		JBrowse link
G RT1-O1l1 RT1 class Ib, locus O1 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,624,073...2,658,023
Ensembl chr20:2,623,953...2,692,081 		JBrowse link
G RT1-S3 RT1 class Ib, locus S3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,670,654...2,675,411
Ensembl chr20:2,670,709...2,675,411 		JBrowse link
G RT1-T24-1 RT1 class I, locus T24, gene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,761,495...2,774,871
Ensembl chr20:2,718,279...2,776,154 		JBrowse link
G RT1-T24-3 RT1 class I, locus T24, gene 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,718,210...2,730,604
Ensembl chr20:2,718,279...2,776,154 		JBrowse link
G RT1-T24-4 RT1 class I, locus T24, gene 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,684,515...2,747,878
Ensembl chr20:2,684,515...2,692,511 		JBrowse link
antigen processing and presentation of exogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec4a C-type lectin domain family 4, member A involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 4:156,340,439...156,434,212
Ensembl chr 4:156,414,688...156,432,402 		JBrowse link
G Clec4a3 C-type lectin domain family 4, member A3 involved_in ISO (PMID:20530286) RGD PMID:20530286 NCBI chr 4:156,214,030...156,224,818
Ensembl chr 4:156,214,718...156,224,817 		JBrowse link
G Fcer1g Fc epsilon receptor Ig involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2384004 (PMID:11911824)		 GO_Central
RGD		 PMID:11911824 GO_REF:0000033 NCBI chr13:83,649,447...83,654,248
Ensembl chr13:83,649,449...83,671,443 		JBrowse link
G Fcgr1a Fc gamma receptor 1A acts_upstream_of_or_within ISO MGI:2664927 (PMID:11911824) RGD PMID:11911824 NCBI chr 2:183,851,075...183,860,077
Ensembl chr 2:183,851,077...183,859,994 		JBrowse link
G Fcgr2a Fc gamma receptor 2A acts_upstream_of_or_within ISO MGI:1861924 (PMID:11911824) RGD PMID:11911824 NCBI chr13:83,280,782...83,297,535
Ensembl chr13:83,280,784...83,295,967 		JBrowse link
G Ifi30 IFI30, lysosomal thiol reductase involved_in ISS
ISO		 GO_REF:0000024
(MGI:5009354|PMID:20538950)		 UniProt
RGD		 PMID:20538950 GO_REF:0000024 MGI:5009354 NCBI chr16:18,675,590...18,679,655
Ensembl chr16:18,675,613...18,681,175 		JBrowse link
G Mfsd6 major facilitator superfamily domain containing 6 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:17010536)		 GO_Central
RGD		 PMID:17010536 GO_REF:0000033 NCBI chr 9:48,773,171...48,858,471
Ensembl chr 9:48,773,414...48,858,465 		JBrowse link
G Mpeg1 macrophage expressed 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:37347855)		 UniProt
RGD		 PMID:37347855 GO_REF:0000024 NCBI chr 1:209,452,176...209,456,692
Ensembl chr 1:209,452,133...209,458,855 		JBrowse link
G RT1-CE16 RT1 class I, locus CE16 involved_in ISO (PMID:12138174), (PMID:7504010) RGD PMID:7504010 PMID:12138174 NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563 		JBrowse link
antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tapbp TAP binding protein involved_in
acts_upstream_of_or_within		 ISO (PMID:9716645) RGD PMID:9716645 NCBI chr20:4,956,937...4,966,191
Ensembl chr20:4,956,937...4,966,181 		JBrowse link
negative regulation of antigen processing and presentation of endogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hfe homeostatic iron regulator involved_in ISO UniProtKB:P04439 (PMID:24643698) RGD PMID:24643698 NCBI chr17:41,413,451...41,421,502
Ensembl chr17:41,413,451...41,421,502 		JBrowse link
negative regulation of antigen processing and presentation of peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tapbpl TAP binding protein-like involved_in ISO (PMID:23401559) RGD PMID:23401559 NCBI chr 4:158,021,454...158,028,905 JBrowse link
peptide antigen assembly with MHC class I protein complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2 microglobulin involved_in IEA
ISO		 GO_REF:0000107
(PMID:36104323)		 Ensembl
RGD		 PMID:36104323 GO_REF:0000107 NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766 		JBrowse link
G Calr calreticulin involved_in ISO (MGI:3813437|PMID:11825569)
(PMID:35948544)		 RGD PMID:11825569 PMID:35948544 MGI:3813437 NCBI chr19:23,308,525...23,313,420
Ensembl chr19:23,308,351...23,313,414 		JBrowse link
G Pdia3 protein disulfide isomerase family A, member 3 involved_in ISO
IEA		 (PMID:17603487)
GO_REF:0000107		 RGD
Ensembl		 PMID:17603487 GO_REF:0000107 NCBI chr 3:108,388,189...108,412,013
Ensembl chr 3:108,388,245...108,413,236 		JBrowse link
G RT1-CE16 RT1 class I, locus CE16 involved_in ISO (PMID:36104323) RGD PMID:36104323 NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563 		JBrowse link
G Tapbp TAP binding protein involved_in ISO
IBA		 (PMID:10636848), (PMID:17603487)
GO_REF:0000033		 RGD
GO_Central		 PMID:10636848 PMID:17603487 GO_REF:0000033 NCBI chr20:4,956,937...4,966,191
Ensembl chr20:4,956,937...4,966,181 		JBrowse link
G Tapbpl TAP binding protein-like involved_in ISO (PMID:26869717) RGD PMID:26869717 NCBI chr 4:158,021,454...158,028,905 JBrowse link
positive regulation of antigen processing and presentation of peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tap2 transporter 2, ATP binding cassette subfamily B member IMP RGD PMID:1758495 RGD:1299069 NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407 		JBrowse link
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