ONTOLOGY REPORT - ANNOTATIONS |
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Term: | excitatory synapse assembly |
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Accession: | GO:1904861
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browse the term
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Definition: | The aggregation, arrangement and bonding together of a set of components to form an excitatory synapse. |
Synonyms: | exact_synonym: | excitatory synapse formation |
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Clstn3 |
calsyntenin 3 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5516394|PMID:24094106) |
UniProt RGD |
PMID:24094106 |
GO_REF:0000024 MGI:5516394 |
NCBI chr 4:157,331,494...157,364,769
Ensembl chr 4:157,331,494...157,364,769
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Cntnap2 |
contactin associated protein 2 |
involved_in |
ISO |
MGI:2677631 (PMID:23074245), (PMID:31141683) |
RGD |
PMID:23074245 PMID:31141683 |
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NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027
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Grid2 |
glutamate ionotropic receptor delta type subunit 2 |
involved_in |
ISO |
(PMID:27418511) |
RGD |
PMID:27418511 |
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NCBI chr 4:92,415,019...93,892,472
Ensembl chr 4:92,415,230...93,889,355
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Lrrc4 |
leucine rich repeat containing 4 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 (PMID:16980967) |
GO_Central RGD |
PMID:16980967 |
GO_REF:0000033 |
NCBI chr 4:57,433,518...57,437,114
Ensembl chr 4:57,433,428...57,437,911
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Nlgn1 |
neuroligin 1 |
involved_in |
ISO IEA |
(MGI:5780536|PMID:22960622), (MGI:5908777|PMID:26440732) GO_REF:0000107 |
RGD Ensembl |
PMID:22960622 PMID:26440732 |
GO_REF:0000107 MGI:5780536 MGI:5908777 |
NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
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Nptn |
neuroplastin |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:5621191 (PMID:24554721) |
Ensembl RGD |
PMID:24554721 |
GO_REF:0000107 |
NCBI chr 8:58,996,873...59,063,402
Ensembl chr 8:58,996,887...59,063,401
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Plxnb2 |
plexin B2 |
involved_in |
ISO |
(MGI:6269924|PMID:29981480) |
RGD |
PMID:29981480 |
MGI:6269924 |
NCBI chr 7:120,232,276...120,258,385
Ensembl chr 7:120,232,331...120,258,330
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Srgap2 |
SLIT-ROBO Rho GTPase activating protein 2 |
involved_in |
ISO |
(PMID:27373832) (MGI:5829526|PMID:27373832) |
RGD |
PMID:27373832 |
MGI:5829526 |
NCBI chr13:42,745,956...42,967,091
Ensembl chr13:42,745,947...42,967,058
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Nlgn2 |
neuroligin 2 |
involved_in acts_upstream_of_or_within |
ISS ISO IEA |
GO_REF:0000024 MGI:2679447 (PMID:29107521) GO_REF:0000107 (MGI:5284797|PMID:15620359) |
BHF-UCL RGD Ensembl |
PMID:15620359 PMID:29107521 |
GO_REF:0000024 GO_REF:0000107 MGI:5284797 |
NCBI chr10:54,544,461...54,557,854
Ensembl chr10:54,544,588...54,558,434
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Nrxn1 |
neurexin 1 |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (MGI:5284797|PMID:15620359), (MGI:5285129|PMID:21424692) |
BHF-UCL Ensembl RGD |
PMID:15620359 PMID:21424692 |
GO_REF:0000024 GO_REF:0000107 MGI:5284797 MGI:5285129 |
NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
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Nrxn2 |
neurexin 2 |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (MGI:5285129|PMID:21424692) |
BHF-UCL Ensembl RGD |
PMID:21424692 |
GO_REF:0000024 GO_REF:0000107 MGI:5285129 |
NCBI chr 1:203,726,420...203,842,301
Ensembl chr 1:203,735,753...203,842,297
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Slitrk3 |
SLIT and NTRK-like family, member 3 |
acts_upstream_of_or_within |
ISO |
MGI:2681835|MGI:6119690 (PMID:29107521) |
RGD |
PMID:29107521 |
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NCBI chr 2:157,680,067...157,697,404
Ensembl chr 2:157,687,535...157,696,709
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Zdhhc12 |
zinc finger DHHC-type palmitoyltransferase 12 |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (MGI:5586946|PMID:25025157) |
UniProt Ensembl RGD |
PMID:25025157 |
GO_REF:0000024 GO_REF:0000107 MGI:5586946 |
NCBI chr 3:13,363,504...13,366,383
Ensembl chr 3:13,363,504...13,366,474
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Clstn3 |
calsyntenin 3 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:7275955|PMID:35420982) |
UniProt RGD |
PMID:35420982 |
GO_REF:0000024 MGI:7275955 |
NCBI chr 4:157,331,494...157,364,769
Ensembl chr 4:157,331,494...157,364,769
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Ptpn13 |
protein tyrosine phosphatase, non-receptor type 13 |
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IDA |
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RGD |
PMID:23769722 |
RGD:152975632 |
NCBI chr14:6,108,202...6,282,619
Ensembl chr14:6,108,211...6,282,563
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Sema4a |
semaphorin 4A |
involved_in |
ISO |
(MGI:6269924|PMID:29981480) |
RGD |
PMID:29981480 |
MGI:6269924 |
NCBI chr 2:173,896,432...173,917,903
Ensembl chr 2:173,896,439...173,914,442
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Vstm5 |
V-set and transmembrane domain containing 5 |
involved_in |
ISS ISO IBA |
GO_REF:0000024 (MGI:5800585|PMID:27683913) GO_REF:0000033 |
UniProt RGD GO_Central |
PMID:27683913 |
GO_REF:0000024 GO_REF:0000033 MGI:5800585 |
NCBI chr 8:12,080,019...12,100,443
Ensembl chr 8:12,080,203...12,100,427
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Wnt7a |
Wnt family member 7A |
involved_in |
ISO |
(PMID:21670302) |
RGD |
PMID:21670302 |
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NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981
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C1ql2 |
complement C1q like 2 |
involved_in |
ISO |
(PMID:27133466) |
RGD |
PMID:27133466 |
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NCBI chr13:31,471,150...31,472,685
Ensembl chr13:31,471,150...31,472,689
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C1ql3 |
complement C1q like 3 |
involved_in |
ISO |
(PMID:27133466) |
RGD |
PMID:27133466 |
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NCBI chr17:76,119,344...76,129,170
Ensembl chr17:76,119,447...76,128,530
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Csmd2 |
CUB and Sushi multiple domains 2 |
involved_in |
ISO |
(PMID:31068362) |
RGD |
PMID:31068362 |
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NCBI chr 5:140,342,352...140,912,422
Ensembl chr 5:140,342,376...140,912,234
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Nptx1 |
neuronal pentraxin 1 |
involved_in |
EXP IMP IDA |
PMID:29024665 |
SynGO |
PMID:29024665 PMID:29024665 PMID:29024665 |
RGD:13702141, RGD:13702141, RGD:13702141 |
NCBI chr10:104,811,107...104,820,358
Ensembl chr10:104,811,403...104,820,367
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Nrxn3 |
neurexin 3 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:27133466) |
Ensembl RGD |
PMID:27133466 |
GO_REF:0000107 |
NCBI chr 6:107,641,760...109,272,849
Ensembl chr 6:107,641,780...109,272,044
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Ntrk3 |
neurotrophic receptor tyrosine kinase 3 |
involved_in |
IDA EXP |
PMID:21262467 |
SynGO |
PMID:21262467 PMID:21262467 |
RGD:13702219, RGD:13702219 |
NCBI chr 1:132,116,472...132,503,849
Ensembl chr 1:132,132,849...132,503,286
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Pten |
phosphatase and tensin homolog |
involved_in |
ISO |
(MGI:3772418|PMID:18082964) |
RGD |
PMID:18082964 |
MGI:3772418 |
NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838
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Shank3 |
SH3 and multiple ankyrin repeat domains 3 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (MGI:4948759|PMID:21423165) GO_REF:0000107 |
BHF-UCL RGD Ensembl |
PMID:21423165 |
GO_REF:0000024 GO_REF:0000107 MGI:4948759 |
NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374
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Slitrk3 |
SLIT and NTRK-like family, member 3 |
acts_upstream_of_or_within |
ISO |
MGI:6119690 (PMID:29107521) |
RGD |
PMID:29107521 |
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NCBI chr 2:157,680,067...157,697,404
Ensembl chr 2:157,687,535...157,696,709
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Clstn3 |
calsyntenin 3 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:6445033|PMID:32434929) |
UniProt RGD |
PMID:32434929 |
GO_REF:0000024 MGI:6445033 |
NCBI chr 4:157,331,494...157,364,769
Ensembl chr 4:157,331,494...157,364,769
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Abi3bp |
ABI family member 3 binding protein |
involved_in |
IMP |
PMID:22485184 |
ARUK-UCL |
PMID:22485184 |
RGD:42721990 |
NCBI chr11:43,912,187...44,128,888
Ensembl chr11:43,913,043...44,128,929
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Caskin1 |
CASK interacting protein 1 |
involved_in |
ISO |
(PMID:31727973) |
RGD |
PMID:31727973 |
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NCBI chr10:13,512,684...13,533,380
Ensembl chr10:13,513,465...13,533,377
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Cbln1 |
cerebellin 1 precursor |
involved_in |
ISO |
(PMID:20395510) |
RGD |
PMID:20395510 |
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NCBI chr19:19,608,763...19,612,572
Ensembl chr19:19,608,716...19,612,572
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Cript |
CXXC repeat containing interactor of PDZ3 domain |
involved_in |
IMP IDA |
PMID:10570482 |
SynGO |
PMID:10570482 PMID:10570482 |
RGD:8554363, RGD:8554363 |
NCBI chr 6:7,581,428...7,589,384
Ensembl chr 6:7,580,703...7,589,399
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Fgfr1 |
Fibroblast growth factor receptor 1 |
involved_in |
ISO |
(PMID:32324534) |
RGD |
PMID:32324534 |
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NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350
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Grid2 |
glutamate ionotropic receptor delta type subunit 2 |
involved_in |
ISO |
(PMID:20395510) |
RGD |
PMID:20395510 |
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NCBI chr 4:92,415,019...93,892,472
Ensembl chr 4:92,415,230...93,889,355
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Il1rap |
interleukin 1 receptor accessory protein |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:22357843) |
Ensembl RGD |
PMID:22357843 |
GO_REF:0000107 |
NCBI chr11:74,062,999...74,199,530
Ensembl chr11:74,070,304...74,199,530
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Lats1 |
large tumor suppressor kinase 1 |
involved_in |
IMP IDA EXP |
PMID:29317530 |
SynGO |
PMID:29317530 PMID:29317530 PMID:29317530 |
RGD:405650325, RGD:405650325, RGD:405650325 |
NCBI chr 1:2,160,411...2,193,640
Ensembl chr 1:2,160,411...2,193,640
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Lrfn1 |
leucine rich repeat and fibronectin type III domain containing 1 |
involved_in |
IMP IDA |
PMID:16630835 |
SynGO |
PMID:16630835 PMID:16630835 |
RGD:13702351, RGD:13702351 |
NCBI chr 1:83,742,442...83,761,450
Ensembl chr 1:83,682,964...83,761,449
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Lrfn4 |
leucine rich repeat and fibronectin type III domain containing 4 |
involved_in |
IBA ISO |
GO_REF:0000033 (PMID:20410109) |
GO_Central RGD |
PMID:20410109 |
GO_REF:0000033 |
NCBI chr 1:201,888,569...201,891,861
Ensembl chr 1:201,888,569...201,891,861
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Lrrc4b |
leucine rich repeat containing 4B |
involved_in |
IMP IBA IDA |
PMID:19252495 GO_REF:0000033 |
GO_Central |
PMID:19252495 PMID:19252495 |
GO_REF:0000033, RGD:13702321, RGD:13702321 |
NCBI chr 1:94,922,034...94,956,309
Ensembl chr 1:94,935,603...94,956,263
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LRRTM1 |
leucine rich repeat transmembrane neuronal 1 |
involved_in |
IMP IDA |
PMID:19285470 |
SynGO |
PMID:19285470 PMID:19285470 |
RGD:8554788, RGD:8554788 |
NCBI chr 4:109,701,815...109,718,924
Ensembl chr 4:109,701,815...109,717,184
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Lrrtm2 |
leucine rich repeat transmembrane neuronal 2 |
involved_in |
IDA IMP |
PMID:19285470 |
SynGO |
PMID:19285470 PMID:19285470 |
RGD:8554788, RGD:8554788 |
NCBI chr18:26,817,816...26,822,864
Ensembl chr18:26,817,816...26,822,864
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Nlgn1 |
neuroligin 1 |
involved_in |
ISO |
(PMID:32324534) |
RGD |
PMID:32324534 |
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NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
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Nrxn1 |
neurexin 1 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:21410790) |
Ensembl RGD |
PMID:21410790 |
GO_REF:0000107 |
NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
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Prickle1 |
prickle planar cell polarity protein 1 |
involved_in |
ISO |
(PMID:34613779) |
RGD |
PMID:34613779 |
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NCBI chr 7:124,639,142...124,735,027
Ensembl chr 7:124,639,142...124,658,113
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Prickle2 |
prickle planar cell polarity protein 2 |
involved_in |
ISO |
(PMID:23711981), (PMID:34613779) |
RGD |
PMID:23711981 PMID:34613779 |
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NCBI chr 4:124,869,655...125,214,862
Ensembl chr 4:124,869,552...125,214,824
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Ptk2b |
protein tyrosine kinase 2 beta |
involved_in |
ISO |
(PMID:28555636) |
RGD |
PMID:28555636 |
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NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282
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Ptprd |
protein tyrosine phosphatase, receptor type, D |
involved_in |
EXP ISO IDA |
PMID:29024665 (PMID:22357843) |
RGD |
PMID:22357843 PMID:29024665 PMID:29024665 |
RGD:13702141, RGD:13702141 |
NCBI chr 5:90,046,993...90,698,977 NCBI chr 5:91,122,354...91,641,754
Ensembl chr 5:90,048,966...92,369,396
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Ptprs |
protein tyrosine phosphatase, receptor type, S |
involved_in |
IDA EXP IMP IEA ISO |
PMID:21262467 GO_REF:0000107 (PMID:21262467) |
Ensembl RGD |
PMID:21262467 PMID:21262467 PMID:21262467 PMID:21262467 |
GO_REF:0000107, RGD:13702219, RGD:13702219, RGD:13702219 |
NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
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Sipa1l1 |
signal-induced proliferation-associated 1 like 1 |
involved_in |
IMP IDA |
PMID:11502259 |
SynGO |
PMID:11502259 PMID:11502259 |
RGD:8554032, RGD:8554032 |
NCBI chr 6:101,839,351...102,118,408
Ensembl chr 6:101,839,404...102,116,950
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Term paths to the root
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