ONTOLOGY REPORT - ANNOTATIONS
Term: miRNA-mediated gene silencing by mRNA destabilization
Accession: GO:0035279
browse the term
Definition: An RNA interference pathway in which microRNAs (miRNAs) direct the cleavage of target mRNAs. Once incorporated into a RNA-induced silencing complex (RISC), a miRNA base pairing with near-perfect complementarity to the target mRNA will typically direct targeted endonucleolytic cleavage of the mRNA. Many plant miRNAs downregulate gene expression through this mechanism.
Synonyms: exact_synonym: gene silencing by miRNA, mRNA cleavage; mRNA cleavage involved in gene silencing by miRNA; mRNA cleavage involved in gene silencing by microRNA; miRNA-mediated gene silencing, mRNA cleavage
broad_synonym: gene silencing by mRNA cleavage
related_synonym: deadenylation involved in gene silencing by miRNA; miRNA-mediated gene silencing by mRNA deadenylation
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Ago1
argonaute RISC component 1
NOT|involved_in
ISO
(PMID:15260970)
RGD
PMID:15260970
NCBI chr 5:138,722,111...138,757,118
Ensembl chr 5:138,722,111...138,773,546
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Ago2
argonaute RISC catalytic component 2
involved_in
ISO ISS IEA
(PMID:15260970), (PMID:17524464), (PMID:18771919) (MGI:5616320|PMID:16357216) GO_REF:0000024 GO_REF:0000104
RGD UniProt
PMID:15260970 PMID:16357216 PMID:17524464 PMID:18771919
GO_REF:0000024 GO_REF:0000104 MGI:5616320
NCBI chr 7:105,018,202...105,105,118
Ensembl chr 7:105,029,120...105,104,974
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Ago3
argonaute RISC catalytic component 3
NOT|involved_in
ISO
(PMID:15260970)
RGD
PMID:15260970
NCBI chr 5:138,632,367...138,714,230
Ensembl chr 5:138,639,569...138,714,230
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Ago4
argonaute RISC component 4
NOT|involved_in
ISO
(PMID:15260970)
RGD
PMID:15260970
NCBI chr 5:138,780,446...138,825,898
Ensembl chr 5:138,783,069...138,825,632
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Cnot6
CCR4-NOT transcription complex, subunit 6
involved_in
ISO ISS
(PMID:20065043) GO_REF:0000024
RGD UniProt
PMID:20065043
GO_REF:0000024
NCBI chr10:33,978,785...34,031,025
Ensembl chr10:33,980,831...34,031,025
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Cnot7
CCR4-NOT transcription complex, subunit 7
involved_in
ISO
(PMID:20065043)
RGD
PMID:20065043
NCBI chr16:51,775,416...51,794,581
Ensembl chr16:51,775,412...51,794,576
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Cnot8
CCR4-NOT transcription complex, subunit 8
involved_in
ISO
(PMID:20065043)
RGD
PMID:20065043
NCBI chr10:42,281,614...42,294,740
Ensembl chr10:42,281,722...42,294,730
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Mir1
microRNA 1
involved_in
ISO
(PMID:23499676), (PMID:25802280)
RGD
PMID:23499676 PMID:25802280
NCBI chr18:1,887,537...1,887,623
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Mir100
microRNA 100
involved_in
ISO
(PMID:22684006)
RGD
PMID:22684006
NCBI chr 8:41,901,225...41,901,304
Ensembl chr 8:41,901,225...41,901,304
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Mir106a
microRNA 106a
involved_in
ISO
(PMID:22912877), (PMID:26265888), (PMID:27325313)
RGD
PMID:22912877 PMID:26265888 PMID:27325313
NCBI chr X:132,422,584...132,422,661
Ensembl chr X:132,422,584...132,422,661
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Mir106b
microRNA 106b
involved_in
ISO
(PMID:27325313)
RGD
PMID:27325313
NCBI chr12:17,043,344...17,043,425
Ensembl chr12:17,043,344...17,043,425
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Mir125a
microRNA 125a
involved_in
ISO
(PMID:30670152)
RGD
PMID:30670152
NCBI chr 1:58,677,626...58,677,710
Ensembl chr 1:58,677,626...58,677,710
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Mir125b1
microRNA 125b-1
involved_in
ISO
(PMID:28214897)
RGD
PMID:28214897
NCBI chr 8:41,952,966...41,953,052
Ensembl chr 8:41,952,966...41,953,052
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Mir125b2
microRNA 125b-2
involved_in
ISO
(PMID:28214897)
RGD
PMID:28214897
NCBI chr11:16,245,620...16,245,707
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Mir128-1
microRNA 128-1
involved_in
ISO
(PMID:33058756)
RGD
PMID:33058756
NCBI chr13:39,699,449...39,699,530
Ensembl chr13:39,699,449...39,699,530
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Mir128-2
microRNA 128-2
involved_in
ISO
(PMID:33058756)
RGD
PMID:33058756
NCBI chr 8:112,085,467...112,085,550
Ensembl chr 8:112,085,467...112,085,550
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Mir130a
microRNA 130a
involved_in
ISO
(PMID:30741461)
RGD
PMID:30741461
NCBI chr 3:69,822,542...69,822,629
Ensembl chr 3:69,822,542...69,822,629
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Mir130b
microRNA 130b
involved_in
ISO
(PMID:24040078)
RGD
PMID:24040078
NCBI chr11:83,880,163...83,880,244
Ensembl chr11:83,880,163...83,880,244
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Mir133a1
microRNA 133a-1
involved_in
ISO
(PMID:32205184)
RGD
PMID:32205184
NCBI chr18:1,885,082...1,885,168
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Mir135b
microRNA 135b
involved_in
ISO
(PMID:27793001)
RGD
PMID:27793001
NCBI chr13:43,638,857...43,638,953
Ensembl chr13:43,638,857...43,638,953
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Mir137
microRNA 137
involved_in
ISO
(PMID:23275153)
RGD
PMID:23275153
NCBI chr 2:206,480,881...206,480,982
Ensembl chr 2:206,480,884...206,480,985
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Mir140
microRNA 140
involved_in
ISO
(PMID:24928442)
RGD
PMID:24928442
NCBI chr19:35,465,577...35,465,675
Ensembl chr19:35,465,577...35,465,675
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Mir142
microRNA 142
involved_in
ISO
(PMID:24558198), (PMID:26572508), (PMID:31168355)
RGD
PMID:24558198 PMID:26572508 PMID:31168355
NCBI chr10:72,557,864...72,557,950
Ensembl chr10:72,557,857...72,557,967
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Mir145
microRNA 145
involved_in
ISO
(PMID:25323858), (PMID:25704091), (PMID:29883722)
RGD
PMID:25323858 PMID:25704091 PMID:29883722
NCBI chr18:55,099,640...55,099,727
Ensembl chr18:55,099,640...55,099,727
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Mir146a
microRNA 146a
involved_in
ISO
(PMID:30779466)
RGD
PMID:30779466
NCBI chr10:27,848,516...27,848,610
Ensembl chr10:27,848,516...27,848,610
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Mir151
microRNA 151
involved_in
ISO
(PMID:20305651)
RGD
PMID:20305651
NCBI chr 7:105,172,377...105,172,473
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Mir16
microRNA 16
involved_in
ISO
(PMID:24418124)
RGD
PMID:24418124
NCBI chr 2:153,245,349...153,245,443
Ensembl chr 2:153,245,349...153,245,443
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Mir181a2
microRNA 181a-2
involved_in
ISO
(PMID:22714950), (PMID:25535255)
RGD
PMID:22714950 PMID:25535255
NCBI chr 3:22,615,845...22,615,961
Ensembl chr 3:22,615,845...22,615,961
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Mir181b1
microRNA 181b-1
involved_in
ISO
(PMID:25535255)
RGD
PMID:25535255
NCBI chr13:49,485,688...49,485,797
Ensembl chr13:49,485,688...49,485,797
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Mir181b2
microRNA 181b-2
involved_in
ISO
(PMID:25535255)
RGD
PMID:25535255
NCBI chr 3:22,616,948...22,617,035
Ensembl chr 3:22,616,948...22,617,035
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Mir181c
microRNA 181c
involved_in
ISO
(PMID:25535255)
RGD
PMID:25535255
NCBI chr19:23,983,523...23,983,628
Ensembl chr19:23,983,523...23,983,628
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Mir181d
microRNA 181d
involved_in
ISO
(PMID:25535255)
RGD
PMID:25535255
NCBI chr19:23,983,706...23,983,788
Ensembl chr19:23,983,706...23,983,788
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Mir185
microRNA 185
involved_in
ISO
(PMID:23459944), (PMID:23951060), (PMID:26316588), (PMID:29053187)
RGD
PMID:23459944 PMID:23951060 PMID:26316588 PMID:29053187
NCBI chr11:82,664,716...82,664,795
Ensembl chr11:82,664,716...82,664,795
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Mir18a
microRNA 18a
involved_in
ISO
(PMID:28131417), (PMID:29988076), (PMID:34937502)
RGD
PMID:28131417 PMID:29988076 PMID:34937502
NCBI chr15:92,180,765...92,180,860
Ensembl chr15:92,180,765...92,180,860
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Mir190b
microRNA 190b
involved_in
ISO
(PMID:32039833)
RGD
PMID:32039833
NCBI chr 2:175,514,800...175,514,877
Ensembl chr 2:175,514,800...175,514,877
G
Mir191
microRNA 191
involved_in
ISO
(PMID:31874245)
RGD
PMID:31874245
NCBI chr 8:109,264,098...109,264,188
G
Mir192
microRNA 192
involved_in
ISO
(PMID:28483554)
RGD
PMID:28483554
NCBI chr 1:203,564,946...203,565,055
Ensembl chr 1:203,564,946...203,565,055
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Mir193a
microRNA 193a
involved_in
ISO
(PMID:29725386)
RGD
PMID:29725386
NCBI chr10:64,672,343...64,672,454
Ensembl chr10:64,672,343...64,672,454
G
Mir195
microRNA 195
involved_in
ISO
(PMID:31921616)
RGD
PMID:31921616
NCBI chr10:54,951,838...54,951,924
Ensembl chr10:54,951,838...54,951,924
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Mir196a
microRNA 196a
acts_upstream_of_or_within
ISO
(PMID:15105502), (PMID:15361871)
RGD
PMID:15105502 PMID:15361871
NCBI chr 7:134,110,400...134,110,509
Ensembl chr 7:134,110,400...134,110,509
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Mir196b
microRNA 196b
acts_upstream_of_or_within
ISO
(PMID:15105502)
RGD
PMID:15105502
NCBI chr 4:81,330,487...81,330,571
Ensembl chr 4:81,330,487...81,330,571
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Mir196c
microRNA 196c
acts_upstream_of_or_within
ISO
(PMID:15105502), (PMID:15361871)
RGD
PMID:15105502 PMID:15361871
NCBI chr10:81,231,006...81,231,085
Ensembl chr10:81,231,006...81,231,085
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Mir19a
microRNA 19a
involved_in
ISO
(PMID:27098600), (PMID:29130787)
RGD
PMID:27098600 PMID:29130787
NCBI chr15:92,180,912...92,180,993
Ensembl chr15:92,180,912...92,180,993
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Mir19b1
microRNA 19b-1
involved_in
ISO
(PMID:27098600)
RGD
PMID:27098600
NCBI chr15:92,181,214...92,181,300
Ensembl chr15:92,181,214...92,181,300
G
Mir19b2
microRNA 19b-2
involved_in
ISO
(PMID:27098600)
RGD
PMID:27098600
NCBI chr X:132,422,072...132,422,167
Ensembl chr X:132,422,072...132,422,167
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Mir1b
microRNA 1b
involved_in
ISO
(PMID:23499676), (PMID:25802280)
RGD
PMID:23499676 PMID:25802280
NCBI chr 3:167,487,117...167,487,201
Ensembl chr 3:167,487,117...167,487,201
G
Mir200b
microRNA 200b
involved_in
ISO
(PMID:22522429)
RGD
PMID:22522429
NCBI chr 5:166,649,272...166,649,366
Ensembl chr 5:166,649,272...166,649,366
G
Mir200c
microRNA 200c
involved_in
ISO
(PMID:22522429)
RGD
PMID:22522429
NCBI chr 4:157,523,679...157,523,747
G
Mir204
microRNA 204
involved_in
ISO
(PMID:20056717)
RGD
PMID:20056717
NCBI chr 1:220,316,931...220,317,040
Ensembl chr 1:220,316,931...220,317,040
G
Mir206
microRNA 206
involved_in
ISO
(PMID:23499676)
RGD
PMID:23499676
NCBI chr 9:23,094,249...23,094,332
Ensembl chr 9:23,094,249...23,094,332
G
Mir20a
microRNA 20a
involved_in
ISO
(PMID:29653364), (PMID:31368162)
RGD
PMID:29653364 PMID:31368162
NCBI chr15:92,181,084...92,181,168
Ensembl chr15:92,181,084...92,181,168
G
Mir20b
microRNA 20b
involved_in
ISO
(PMID:32336590)
RGD
PMID:32336590
NCBI chr X:132,422,211...132,422,282
Ensembl chr X:132,422,211...132,422,282
G
Mir210
microRNA 210
involved_in
ISO
(PMID:29944867)
RGD
PMID:29944867
NCBI chr 1:196,326,343...196,326,452
Ensembl chr 1:196,326,337...196,326,454
G
Mir211
microRNA 211
involved_in
ISO
(PMID:21109473)
RGD
PMID:21109473
NCBI chr 1:117,777,539...117,777,644
Ensembl chr 1:117,777,539...117,777,644
G
Mir212
microRNA 212
involved_in
ISO
(PMID:26693054)
RGD
PMID:26693054
NCBI chr10:60,023,403...60,023,513
Ensembl chr10:60,023,403...60,023,513
G
Mir214
microRNA 214
involved_in
ISO
(PMID:30703347)
RGD
PMID:30703347
NCBI chr13:74,588,374...74,588,481
Ensembl chr13:74,588,372...74,588,481
G
Mir223
microRNA 223
involved_in
ISO
(PMID:23459944), (PMID:30807577), (PMID:34637033)
RGD
PMID:23459944 PMID:30807577 PMID:34637033
NCBI chr X:61,141,887...61,141,996
Ensembl chr X:61,141,887...61,141,996
G
Mir23a
microRNA 23a
involved_in
ISO
(PMID:26400397)
RGD
PMID:26400397
NCBI chr19:23,954,997...23,955,071
Ensembl chr19:23,954,997...23,955,071
G
Mir24-2
microRNA 24-2
involved_in
ISO
(PMID:30378100)
RGD
PMID:30378100
NCBI chr19:23,954,683...23,954,790
Ensembl chr19:23,954,683...23,954,790
G
Mir26b
microRNA 26b
involved_in
ISO
(PMID:25536365)
RGD
PMID:25536365
NCBI chr 9:75,976,596...75,976,680
Ensembl chr 9:75,976,596...75,976,680
G
Mir27a
microRNA 27a
involved_in
ISO
(PMID:25915942), (PMID:26400397)
RGD
PMID:25915942 PMID:26400397
NCBI chr19:23,954,831...23,954,917
Ensembl chr19:23,954,831...23,954,917
G
Mir27b
microRNA 27b
involved_in
ISO
(PMID:30729664)
RGD
PMID:30729664
NCBI chr17:1,813,427...1,813,523
Ensembl chr17:1,813,426...1,813,529
G
Mir29b1
microRNA 29b-1
involved_in
ISO
(PMID:26175849)
RGD
PMID:26175849
NCBI chr 4:59,650,987...59,651,067
Ensembl chr 4:59,650,986...59,651,067
G
Mir29b2
microRNA 29b-2
involved_in
ISO
(PMID:26175849)
RGD
PMID:26175849
NCBI chr13:106,570,371...106,570,451
Ensembl chr13:106,570,367...106,570,456
G
Mir30b
microRNA 30b
involved_in
ISO
(PMID:23968872)
RGD
PMID:23968872
NCBI chr 7:100,132,589...100,132,675
Ensembl chr 7:100,132,589...100,132,675
G
Mir320a
microRNA 320a
involved_in
ISO
(PMID:32271402)
RGD
PMID:32271402
NCBI chr15:45,516,392...45,516,473
Ensembl chr15:45,516,392...45,516,473
G
Mir322
microRNA 322
involved_in
ISO
(PMID:29130787)
RGD
PMID:29130787
NCBI chr X:132,806,594...132,806,688
Ensembl chr X:132,806,594...132,806,688
G
Mir326
microRNA 326
involved_in
ISO
(PMID:24279830)
RGD
PMID:24279830
NCBI chr 1:153,854,029...153,854,123
Ensembl chr 1:153,854,029...153,854,123
G
Mir337
microRNA 337
involved_in
ISO
(PMID:22723956)
RGD
PMID:22723956
NCBI chr 6:128,538,903...128,538,999
Ensembl chr 6:128,538,902...128,538,998
G
Mir340-1
microRNA 340-1
involved_in
ISO
(PMID:28413603)
RGD
PMID:28413603
NCBI chr10:34,393,568...34,393,665
Ensembl chr10:34,393,568...34,393,665
G
Mir342
microRNA 342
involved_in
ISO
(PMID:23951060)
RGD
PMID:23951060
NCBI chr 6:127,565,269...127,565,367
Ensembl chr 6:127,565,269...127,565,367
G
Mir34b
microRNA 34b
involved_in
ISO
(PMID:22336710)
RGD
PMID:22336710
NCBI chr 8:51,410,244...51,410,327
Ensembl chr 8:51,410,244...51,410,327
G
Mir3582
microRNA 3582
involved_in
ISO
(PMID:32205184)
RGD
PMID:32205184
NCBI chr18:1,885,063...1,885,180
Ensembl chr18:1,885,063...1,885,180
G
Mir365b
microRNA 365b
involved_in
ISO
(PMID:30910589)
RGD
PMID:30910589
NCBI chr10:64,686,255...64,686,340
Ensembl chr10:64,686,252...64,686,351
G
Mir423
microRNA 423
involved_in
ISO
(PMID:32264887)
RGD
PMID:32264887
NCBI chr10:61,914,142...61,914,220
Ensembl chr10:61,914,133...61,914,226
G
Mir486
microRNA 486
involved_in
ISO
(PMID:25857263)
RGD
PMID:25857263
G
Mir497
microRNA 497
involved_in
ISO
(PMID:29969696)
RGD
PMID:29969696
NCBI chr10:54,951,514...54,951,582
Ensembl chr10:54,951,505...54,951,584
G
Mir544
microRNA 544
involved_in
ISO
(PMID:27186677)
RGD
PMID:27186677
NCBI chr 6:128,743,530...128,743,607
Ensembl chr 6:128,743,530...128,743,607
G
Mir665
microRNA 665
involved_in
ISO
(PMID:34454184)
RGD
PMID:34454184
NCBI chr 6:128,539,440...128,539,533
Ensembl chr 6:128,539,440...128,539,533
G
Mir708
microRNA 708
involved_in
ISO
(PMID:26932538)
RGD
PMID:26932538
NCBI chr 1:150,599,876...150,599,963
Ensembl chr 1:150,599,876...150,599,963
G
Mir9-3
microRNA 9-3
involved_in
ISO
(PMID:26315535), (PMID:29584810)
RGD
PMID:26315535 PMID:29584810
NCBI chr 1:133,440,049...133,440,138
G
Mir93
microRNA 93
involved_in
ISO
(PMID:24606633), (PMID:28797104)
RGD
PMID:24606633 PMID:28797104
NCBI chr12:17,043,135...17,043,221
Ensembl chr12:17,043,135...17,043,221
G
Mir96
microRNA 96
involved_in
ISO
(PMID:23459944)
RGD
PMID:23459944
NCBI chr 4:58,788,411...58,788,516
Ensembl chr 4:58,788,411...58,788,516
G
Mir98
microRNA 98
involved_in
ISO
(PMID:27860183), (PMID:28251559), (PMID:30195495)
RGD
PMID:27860183 PMID:28251559 PMID:30195495
NCBI chr X:20,981,235...20,981,342
Ensembl chr X:20,981,235...20,981,342
G
Mirlet7a1
microRNA let-7a-1
involved_in
ISO
(PMID:17671087), (PMID:30467960)
RGD
PMID:17671087 PMID:30467960
NCBI chr17:16,113,766...16,113,859
Ensembl chr17:16,113,768...16,113,867
G
Mirlet7b
microRNA let-7b
involved_in
ISO
(PMID:29471394)
RGD
PMID:29471394
NCBI chr 7:116,804,186...116,804,270
Ensembl chr 7:116,804,186...116,804,270
G
Mirlet7c1
microRNA let-7c-1
involved_in
ISO
(PMID:19841744)
RGD
PMID:19841744
NCBI chr11:16,201,163...16,201,256
Ensembl chr11:16,201,158...16,201,265
G
Mirlet7c2
microRNA let7c-2
involved_in
ISO
(PMID:17671087), (PMID:30467960)
RGD
PMID:17671087 PMID:30467960
NCBI chr 7:116,803,771...116,803,865
Ensembl chr 7:116,803,771...116,803,865
G
Mov10
Mov10 RNA helicase
involved_in
ISO
(PMID:16289642)
RGD
PMID:16289642
NCBI chr 2:192,292,041...192,315,142
Ensembl chr 2:192,293,470...192,315,083
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