Ap1g1 (adaptor related protein complex 1 subunit gamma 1) - Rat Genome Database

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Gene: Ap1g1 (adaptor related protein complex 1 subunit gamma 1) Rattus norvegicus
Analyze
Symbol: Ap1g1
Name: adaptor related protein complex 1 subunit gamma 1
RGD ID: 619785
Description: Enables collagen binding activity. Involved in synaptic vesicle budding from endosome and synaptic vesicle endocytosis. Predicted to be located in several cellular components, including cytoplasmic vesicle; perinuclear region of cytoplasm; and trans-Golgi network. Predicted to be part of AP-1 adaptor complex. Predicted to be active in presynapse. Orthologous to human AP1G1 (adaptor related protein complex 1 subunit gamma 1); INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; 4-amino-2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: adaptor protein complex AP-1 gamma 1 subunit; adaptor protein complex AP-1, gamma 1 subunit; adaptor-related protein complex 1, gamma 1 subunit; AP-1 complex subunit gamma-1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81954,654,101 - 54,740,586 (+)NCBIGRCr8
mRatBN7.21937,744,633 - 37,831,134 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1937,744,633 - 37,829,167 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1944,557,067 - 44,643,433 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01945,210,401 - 45,296,775 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01947,520,023 - 47,606,391 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01941,805,252 - 41,860,076 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01952,628,652 - 52,684,797 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41939,676,021 - 39,734,854 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11939,730,027 - 39,738,578 (+)NCBI
Celera1937,174,653 - 37,231,881 (+)NCBICelera
Cytogenetic Map19q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2,4-dinitrotoluene  (EXP)
2,6-dinitrotoluene  (EXP)
3,4-methylenedioxymethamphetamine  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-amino-2,6-dinitrotoluene  (EXP)
acetamide  (EXP)
acrolein  (ISO)
acrylamide  (ISO)
actinomycin D  (ISO)
all-trans-retinoic acid  (ISO)
alpha-pinene  (ISO)
ammonium chloride  (EXP)
arsenite(3-)  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bisphenol A  (EXP,ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
calcitriol  (ISO)
CGP 52608  (ISO)
chlorpyrifos  (EXP,ISO)
choline  (ISO)
copper(II) sulfate  (ISO)
dexamethasone  (ISO)
diazinon  (EXP)
Dibutyl phosphate  (ISO)
ethanol  (ISO)
flutamide  (EXP)
folic acid  (ISO)
gallic acid  (ISO)
indometacin  (ISO)
inulin  (ISO)
ivermectin  (ISO)
L-methionine  (ISO)
leflunomide  (ISO)
methapyrilene  (EXP)
methotrexate  (ISO)
methoxyacetic acid  (ISO)
methyl methanesulfonate  (ISO)
Nutlin-3  (ISO)
ozone  (ISO)
paracetamol  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (ISO)
promegestone  (ISO)
propiconazole  (ISO)
pyrogallol  (ISO)
raloxifene  (ISO)
resveratrol  (ISO)
SB 431542  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenite  (ISO)
sodium fluoride  (ISO)
tamoxifen  (ISO)
titanium dioxide  (ISO)
trimellitic anhydride  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Adaptor protein complexes 1 and 3 are essential for generation of synaptic vesicles from activity-dependent bulk endosomes. Cheung G and Cousin MA, J Neurosci. 2012 Apr 25;32(17):6014-23. doi: 10.1523/JNEUROSCI.6305-11.2012.
2. AP-1/sigma1B-adaptin mediates endosomal synaptic vesicle recycling, learning and memory. Glyvuk N, etal., EMBO J. 2010 Apr 21;29(8):1318-30. doi: 10.1038/emboj.2010.15. Epub 2010 Mar 4.
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
5. Interactions between adaptor protein-1 of the clathrin coat and microtubules via type 1a microtubule-associated proteins. Orzech E, etal., J Biol Chem 2001 Aug 17;276(33):31340-8.
6. Gamma-synergin: an EH domain-containing protein that interacts with gamma-adaptin. Page LJ, etal., J Cell Biol 1999 Sep 6;146(5):993-1004.
7. Endosome-mediated endocytic mechanism replenishes the majority of synaptic vesicles at mature CNS synapses in an activity-dependent manner. Park J, etal., Sci Rep. 2016 Aug 18;6:31807. doi: 10.1038/srep31807.
8. GOA pipeline RGD automated data pipeline
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Enthoprotin: a novel clathrin-associated protein identified through subcellular proteomics. Wasiak S, etal., J Cell Biol 2002 Sep 2;158(5):855-62. Epub 2002 Sep 03.
Additional References at PubMed
PMID:9243506   PMID:9733768   PMID:10444069   PMID:12477932   PMID:12498786   PMID:12536145   PMID:15469932   PMID:16621800   PMID:17341485   PMID:18762162   PMID:19841138   PMID:19946888  
PMID:22511774   PMID:23632890  


Genomics

Comparative Map Data
Ap1g1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81954,654,101 - 54,740,586 (+)NCBIGRCr8
mRatBN7.21937,744,633 - 37,831,134 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1937,744,633 - 37,829,167 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1944,557,067 - 44,643,433 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01945,210,401 - 45,296,775 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01947,520,023 - 47,606,391 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01941,805,252 - 41,860,076 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01952,628,652 - 52,684,797 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41939,676,021 - 39,734,854 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11939,730,027 - 39,738,578 (+)NCBI
Celera1937,174,653 - 37,231,881 (+)NCBICelera
Cytogenetic Map19q12NCBI
AP1G1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381671,729,000 - 71,808,834 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1671,729,000 - 71,809,201 (-)EnsemblGRCh38hg38GRCh38
GRCh371671,762,903 - 71,842,737 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361670,320,404 - 70,400,477 (-)NCBINCBI36Build 36hg18NCBI36
Build 341670,320,415 - 70,400,477NCBI
Celera1656,079,081 - 56,139,681 (-)NCBICelera
Cytogenetic Map16q22.2NCBI
HuRef1657,530,455 - 57,610,654 (-)NCBIHuRef
CHM1_11673,175,717 - 73,255,849 (-)NCBICHM1_1
T2T-CHM13v2.01677,546,146 - 77,626,032 (-)NCBIT2T-CHM13v2.0
Ap1g1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398110,505,215 - 110,590,842 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl8110,505,186 - 110,590,836 (+)EnsemblGRCm39 Ensembl
GRCm388109,778,583 - 109,864,210 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8109,778,554 - 109,864,204 (+)EnsemblGRCm38mm10GRCm38
MGSCv378112,302,540 - 112,384,835 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv368112,667,839 - 112,750,487 (+)NCBIMGSCv36mm8
Celera8114,004,323 - 114,082,583 (+)NCBICelera
Cytogenetic Map8D3NCBI
cM Map857.26NCBI
Ap1g1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554844,430,461 - 4,510,497 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554844,430,461 - 4,511,368 (-)NCBIChiLan1.0ChiLan1.0
AP1G1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21882,349,579 - 82,430,963 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11688,278,156 - 88,356,757 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01653,201,859 - 53,282,437 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11671,568,856 - 71,648,744 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1671,568,863 - 71,648,744 (-)Ensemblpanpan1.1panPan2
AP1G1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1577,512,865 - 77,589,136 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl577,432,517 - 77,565,801 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha577,471,192 - 77,550,461 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0577,949,221 - 78,028,610 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl577,869,730 - 78,028,575 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1577,769,242 - 77,848,763 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0577,592,241 - 77,671,470 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0578,091,430 - 78,170,707 (-)NCBIUU_Cfam_GSD_1.0
Ap1g1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934937,525,971 - 37,605,861 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647521,983,248 - 22,063,181 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647521,983,248 - 22,063,133 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AP1G1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl614,719,959 - 14,809,491 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1614,719,949 - 14,809,821 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2614,338,265 - 14,426,133 (-)NCBISscrofa10.2Sscrofa10.2susScr3
AP1G1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1554,850,831 - 54,944,915 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl554,850,694 - 54,944,900 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604717,652,522 - 17,740,544 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ap1g1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474613,997,681 - 14,081,197 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474613,997,903 - 14,081,140 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ap1g1
271 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61350Bp32Blood pressure QTL 320.012arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)192048357557337602Rat
61447Tcas1Tongue tumor susceptibility QTL 16.08tongue integrity trait (VT:0010553)squamous cell carcinoma of the tongue maximum tumor diameter (CMO:0001875)19231612147316121Rat
724546Kidm3Kidney mass QTL 33.1kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)192932249057337602Rat
7411549Bw130Body weight QTL 13050.001body mass (VT:0001259)body weight gain (CMO:0000420)191545586057337602Rat
1358200Insglur2Insulin/glucose ratio QTL 24.1blood glucose amount (VT:0000188)serum glucose level (CMO:0000543)193383821455283146Rat
1331737Uae29Urinary albumin excretion QTL 295.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19409615555283277Rat
724518Uae19Urinary albumin excretion QTL 195.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19745724942983518Rat
2298478Eau8Experimental allergic uveoretinitis QTL 80.0163uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)191715443357337602Rat
8694186Bw152Body weight QTL 1523.340.001body mass (VT:0001259)body weight gain (CMO:0000420)1956937445569374Rat
61423Cia14Collagen induced arthritis QTL 143joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)191082797043544039Rat
1578764Stresp19Stress response QTL 193.60.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)191563020157337602Rat
1331788Rf45Renal function QTL 452.818kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)191560502346559041Rat
2317848Alcrsp21Alcohol response QTL 211.8999999761581420.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)19320477748204777Rat
1354607Gmadr1Adrenal mass QTL 15.83adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)192753020737947399Rat
9589102Slep13Serum leptin concentration QTL 134.630.001blood leptin amount (VT:0005667)plasma leptin level (CMO:0000781)1956937445569374Rat
7247442Uae39Urinary albumin excretion QTL 39urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19218792746708701Rat
1549835Tcas7Tongue tumor susceptibility QTL 70.001tongue integrity trait (VT:0010553)squamous cell carcinoma of the head and neck tumor number (CMO:0001876)192481797839654489Rat
1354600Salc2Saline consumption QTL 29.910.001drinking behavior trait (VT:0001422)saline drink intake rate (CMO:0001627)192753020737947399Rat
724566Uae12Urinary albumin excretion QTL 125urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19218792756457239Rat
1354633Bw28Body weight QTL 286.04body mass (VT:0001259)body weight (CMO:0000012)192753020737947399Rat
724565Tcas5Tongue tumor susceptibility QTL 510.04tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)19997775339654489Rat

Markers in Region
D19Got31  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21937,756,669 - 37,756,863 (-)MAPPERmRatBN7.2
Rnor_6.01941,874,237 - 41,874,432NCBIRnor6.0
Rnor_5.01952,698,958 - 52,699,153UniSTSRnor5.0
RGSC_v3.41939,662,024 - 39,662,220RGDRGSC3.4
RGSC_v3.41939,662,025 - 39,662,220UniSTSRGSC3.4
RGSC_v3.11939,666,906 - 39,667,101RGD
Celera1937,160,656 - 37,160,851UniSTS
RH 3.4 Map19415.5UniSTS
RH 3.4 Map19415.5RGD
RH 2.0 Map19480.6RGD
Cytogenetic Map19q12UniSTS
RH132798  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21937,827,876 - 37,828,072 (-)MAPPERmRatBN7.2
Rnor_6.01941,805,508 - 41,805,703NCBIRnor6.0
Rnor_5.01952,628,908 - 52,629,103UniSTSRnor5.0
RGSC_v3.41939,734,403 - 39,734,598UniSTSRGSC3.4
Celera1937,231,430 - 37,231,625UniSTS
RH 3.4 Map19425.5UniSTS
Cytogenetic Map19q12UniSTS
AI555481  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21937,828,353 - 37,828,561 (-)MAPPERmRatBN7.2
Rnor_6.01941,805,019 - 41,805,226NCBIRnor6.0
Rnor_5.01952,628,419 - 52,628,626UniSTSRnor5.0
RGSC_v3.41939,734,880 - 39,735,087UniSTSRGSC3.4
Celera1937,231,907 - 37,232,114UniSTS
Cytogenetic Map19q12UniSTS
AA957928  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21937,828,295 - 37,828,484 (-)MAPPERmRatBN7.2
Rnor_6.01941,805,096 - 41,805,284NCBIRnor6.0
Rnor_5.01952,628,496 - 52,628,684UniSTSRnor5.0
RGSC_v3.41939,734,822 - 39,735,010UniSTSRGSC3.4
Celera1937,231,849 - 37,232,037UniSTS
RH 3.4 Map19426.1UniSTS
Cytogenetic Map19q12UniSTS
RH124805  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21937,828,036 - 37,828,306 (-)MAPPERmRatBN7.2
Rnor_6.01941,805,274 - 41,805,543NCBIRnor6.0
Rnor_5.01952,628,674 - 52,628,943UniSTSRnor5.0
RGSC_v3.41939,734,563 - 39,734,832UniSTSRGSC3.4
Celera1937,231,590 - 37,231,859UniSTS
Cytogenetic Map19q12UniSTS


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSRNOT00000099597   ⟹   ENSRNOP00000090346
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1937,744,633 - 37,829,167 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000107107   ⟹   ENSRNOP00000097388
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1937,744,633 - 37,829,167 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000108684   ⟹   ENSRNOP00000077402
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1937,769,719 - 37,829,167 (+)Ensembl
RefSeq Acc Id: NM_001393712   ⟹   NP_001380641
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81954,654,101 - 54,740,586 (+)NCBI
mRatBN7.21937,744,633 - 37,831,134 (+)NCBI
RefSeq Acc Id: NM_134460   ⟹   NP_604455
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81954,654,101 - 54,740,586 (+)NCBI
mRatBN7.21937,744,633 - 37,831,134 (+)NCBI
Rnor_6.01941,805,252 - 41,860,076 (-)NCBI
Rnor_5.01952,628,652 - 52,684,797 (-)NCBI
RGSC_v3.41939,676,021 - 39,734,854 (+)RGD
Celera1937,174,653 - 37,231,881 (+)RGD
Sequence:
RefSeq Acc Id: XM_063277764   ⟹   XP_063133834
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81954,657,827 - 54,740,583 (+)NCBI
RefSeq Acc Id: XM_063277765   ⟹   XP_063133835
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81954,672,878 - 54,740,583 (+)NCBI
RefSeq Acc Id: NP_604455   ⟸   NM_134460
- Peptide Label: isoform 2
- UniProtKB: B2RYN6 (UniProtKB/TrEMBL),   A0A8I6AE72 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000077402   ⟸   ENSRNOT00000108684
Ensembl Acc Id: ENSRNOP00000090346   ⟸   ENSRNOT00000099597
Ensembl Acc Id: ENSRNOP00000097388   ⟸   ENSRNOT00000107107
RefSeq Acc Id: NP_001380641   ⟸   NM_001393712
- Peptide Label: isoform 1
- UniProtKB: A0A8I6ARE9 (UniProtKB/TrEMBL),   A0A8I6AE72 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063133834   ⟸   XM_063277764
- Peptide Label: isoform X1
- UniProtKB: A0A8I6AE72 (UniProtKB/TrEMBL),   B2RYN6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063133835   ⟸   XM_063277765
- Peptide Label: isoform X1
- UniProtKB: A0A8I6AE72 (UniProtKB/TrEMBL),   B2RYN6 (UniProtKB/TrEMBL)
Protein Domains
Clathrin/coatomer adaptor adaptin-like N-terminal   GAE

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:619785 AgrOrtholog
BioCyc Gene G2FUF-5710 BioCyc
Ensembl Genes ENSRNOG00000069458 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000099597.1 UniProtKB/TrEMBL
  ENSRNOT00000107107.1 UniProtKB/TrEMBL
  ENSRNOT00000108684.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.10.10 UniProtKB/TrEMBL
  2.60.40.1230 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:9029827 IMAGE-MGC_LOAD
InterPro Adaptor_Complx_Large_Subunit UniProtKB/TrEMBL
  AP1_complex_gsu UniProtKB/TrEMBL
  ARM-like UniProtKB/TrEMBL
  ARM-type_fold UniProtKB/TrEMBL
  Clathrin/coatomer_adapt-like_N UniProtKB/TrEMBL
  Clathrin/coatomer_app_Ig-like UniProtKB/TrEMBL
  Clathrin_a/b/g-adaptin_app_Ig UniProtKB/TrEMBL
  Clathrin_g-adaptin_app UniProtKB/TrEMBL
MGC_CLONE MGC:188737 IMAGE-MGC_LOAD
NCBI Gene 171494 ENTREZGENE
PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON UniProtKB/TrEMBL
  AP-1 COMPLEX SUBUNIT GAMMA-1 UniProtKB/TrEMBL
Pfam Adaptin_N UniProtKB/TrEMBL
  Alpha_adaptinC2 UniProtKB/TrEMBL
PhenoGen Ap1g1 PhenoGen
PIRSF AP1_complex_gamma UniProtKB/TrEMBL
PROSITE GAE UniProtKB/TrEMBL
RatGTEx ENSRNOG00000069458 RatGTEx
SMART Alpha_adaptinC2 UniProtKB/TrEMBL
Superfamily-SCOP ARM-type_fold UniProtKB/TrEMBL
  Clath_adapt UniProtKB/TrEMBL
UniProt A0A8I5Y697_RAT UniProtKB/TrEMBL
  A0A8I6AE72 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6ARE9 ENTREZGENE, UniProtKB/TrEMBL
  A6IZ36_RAT UniProtKB/TrEMBL
  B2RYN6 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-05-03 Ap1g1  adaptor related protein complex 1 subunit gamma 1  Ap1g1  adaptor-related protein complex 1, gamma 1 subunit  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-01-20 Ap1g1  adaptor-related protein complex 1, gamma 1 subunit    adaptor protein complex AP-1, gamma 1 subunit  Name updated 1299863 APPROVED
2002-08-07 Ap1g1  adaptor protein complex AP-1, gamma 1 subunit      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_physical_interaction interacts with microtubules 634622