Marveld3 (MARVEL domain containing 3) - Rat Genome Database

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Gene: Marveld3 (MARVEL domain containing 3) Heterocephalus glaber
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Symbol: Marveld3
Name: MARVEL domain containing 3
RGD ID: 18927478
Description: ENCODES a protein that exhibits mitogen-activated protein kinase kinase kinase binding (ortholog); INVOLVED IN bicellular tight junction assembly (ortholog); cell-cell junction organization (ortholog); negative regulation of epithelial cell migration (ortholog); FOUND IN bicellular tight junction (ortholog); cytoplasmic vesicle (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: MARVEL domain-containing protein 3
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474613,898,857 - 13,914,032 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:21993625   PMID:22301074  


Genomics

Comparative Map Data
Marveld3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474613,898,857 - 13,914,032 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
MARVELD3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381671,626,184 - 71,641,965 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1671,626,161 - 71,642,114 (+)Ensemblhg38GRCh38
GRCh371671,660,087 - 71,675,868 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361670,217,571 - 70,233,369 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341670,217,589 - 70,226,732NCBI
Celera1655,976,129 - 55,991,929 (+)NCBICelera
Cytogenetic Map16q22.2NCBI
HuRef1657,428,132 - 57,443,707 (+)NCBIHuRef
CHM1_11673,072,839 - 73,088,630 (+)NCBICHM1_1
T2T-CHM13v2.01677,443,349 - 77,459,129 (+)NCBIT2T-CHM13v2.0
Marveld3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398110,674,541 - 110,688,837 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl8110,674,546 - 110,688,835 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm388109,947,909 - 109,962,205 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8109,947,914 - 109,962,203 (-)Ensemblmm10GRCm38
MGSCv378112,471,809 - 112,486,105 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv368112,837,043 - 112,851,301 (-)NCBIMGSCv36mm8
Celera8114,169,861 - 114,184,142 (-)NCBICelera
Cytogenetic Map8D3NCBI
cM Map857.38NCBI
Marveld3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81954,818,180 - 54,832,871 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1954,818,180 - 54,832,871 (-)EnsemblGRCr8
mRatBN7.21937,908,727 - 37,923,420 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1937,905,638 - 37,923,420 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1944,721,040 - 44,735,720 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01945,374,382 - 45,389,062 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01947,683,994 - 47,698,676 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd1948,602,547 - 48,617,227 (-)NCBIDahl_SR_JrHsd
Lyon_Normotensive1946,726,012 - 46,740,691 (-)NCBILyon_Normotensive
Lyon_Hypertensive1948,600,745 - 48,615,425 (-)NCBILyon_Hypertensive
F344_StmMcwi1946,349,211 - 46,363,991 (-)NCBIF344_StmMcwi
Rnor_6.01941,710,076 - 41,724,923 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1941,710,102 - 41,724,923 (+)Ensemblrn6Rnor6.0
Rnor_5.01952,533,493 - 52,548,323 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41939,815,223 - 39,829,914 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1937,312,319 - 37,327,013 (-)NCBICelera
Cytogenetic Map19q12NCBI
MARVELD3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21882,517,624 - 82,533,582 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11688,448,452 - 88,464,397 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01653,369,080 - 53,385,031 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11671,463,722 - 71,477,951 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1671,463,824 - 71,477,631 (+)EnsemblpanPan2panpan1.1
MARVELD3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1577,412,353 - 77,421,032 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl577,412,101 - 77,425,578 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha577,373,388 - 77,388,132 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0577,850,906 - 77,865,672 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl577,851,185 - 77,864,727 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1577,670,919 - 77,685,750 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0577,494,107 - 77,508,903 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0577,993,065 - 78,007,828 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Marveld3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934937,432,404 - 37,450,390 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647522,146,100 - 22,156,702 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493647522,141,276 - 22,156,649 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MARVELD3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl614,616,481 - 14,625,983 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1614,616,508 - 14,630,798 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2614,109,585 - 14,123,646 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MARVELD3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1554,748,029 - 54,765,007 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl554,748,061 - 54,765,252 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604717,551,303 - 17,567,015 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Marveld3
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11729,652,519 - 29,667,038 (-)NCBIRrattus_CSIRO_v1


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_004842903   ⟹   XP_004842960
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462474613,898,879 - 13,914,032 (+)NCBI
RefSeq Acc Id: XM_013071506   ⟹   XP_012926960
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462474613,898,857 - 13,908,058 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004842960 (Get FASTA)   NCBI Sequence Viewer  
  XP_012926960 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB10954 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000018661
RefSeq Acc Id: XP_012926960   ⟸   XM_013071506
- Peptide Label: isoform X2
- UniProtKB: A0AAX6QSI3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004842960   ⟸   XM_004842903
- Peptide Label: isoform X1
- UniProtKB: G5BNU3 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000013360 ENTREZGENE
Ensembl Transcript ENSHGLT00000018847 ENTREZGENE
InterPro Marvel UniProtKB/TrEMBL
  MARVEL-CKLF_proteins UniProtKB/TrEMBL
  MARVEL_domain_protein_3 UniProtKB/TrEMBL
KEGG Report hgl:101700252 UniProtKB/TrEMBL
NCBI Gene Marveld3 ENTREZGENE
PANTHER GEO08273P1-RELATED UniProtKB/TrEMBL
  GEO08273P1-RELATED UniProtKB/TrEMBL
  MARVEL DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
  MARVEL-CONTAINING POTENTIAL LIPID RAFT-ASSOCIATED PROTEIN UniProtKB/TrEMBL
Pfam MARVEL UniProtKB/TrEMBL
PROSITE MARVEL UniProtKB/TrEMBL
UniProt A0AAX6QSI3 ENTREZGENE, UniProtKB/TrEMBL
  G5BNU3 ENTREZGENE, UniProtKB/TrEMBL