Advanced Search (OLGA)

Gene: PRP4K (pre-mRNA processing factor kinase PRP4K) Chlorocebus sabaeus

Analyze

Symbol:

PRP4K (Ensembl: PRPF4B)

Name:

pre-mRNA processing factor kinase PRP4K

RGD ID:

18772805

Description:

ENCODES a protein that exhibits ATP binding (inferred); kinase activity (inferred); nucleotide binding (inferred); INVOLVED IN mRNA cis splicing, via spliceosome (inferred); mRNA processing (inferred); positive regulation of hippo signaling (inferred); FOUND IN nucleus (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

pre-mRNA processing factor 4B; PRPF4B; serine/threonine-protein kinase PRP4 homolog

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	68,110,544 - 68,153,939 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	17	68,114,973 - 68,153,844 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666044	3,972,241 - 4,015,978 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

mRNA cis splicing, via spliceosome (IEA)

mRNA processing (IEA)

positive regulation of hippo signaling (IEA)

positive regulation of protein export from nucleus (IEA)

regulation of mitotic cell cycle spindle assembly checkpoint (IEA)

RNA splicing (IEA)

spliceosomal snRNP assembly (IEA)

spliceosomal tri-snRNP complex assembly (IEA)

Cellular Component

catalytic step 2 spliceosome (IEA)

chromosome (IEA)

kinetochore (IEA)

nuclear speck (IEA)

nucleus (IEA,ISO)

spliceosomal complex (IEA)

Molecular Function

ATP binding (IEA)

kinase activity (IEA)

nucleotide binding (IEA)

protein binding (ISO)

protein kinase activity (IEA)

protein serine/threonine kinase activity (IEA)

transferase activity (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

PRP4K
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	68,110,544 - 68,153,939 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	17	68,114,973 - 68,153,844 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666044	3,972,241 - 4,015,978 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

PRP4K
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	4,021,300 - 4,064,983 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	4,021,266 - 4,064,983 (+)	Ensembl			hg38	GRCh38
GRCh37	6	4,021,534 - 4,065,217 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	3,966,568 - 4,010,216 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	6	3,966,594 - 4,010,215	NCBI
Celera	6	5,250,468 - 5,293,786 (+)	NCBI		Celera
Cytogenetic Map	6	p25.2	NCBI
HuRef	6	3,898,364 - 3,941,580 (+)	NCBI		HuRef
CHM1_1	6	4,024,403 - 4,067,684 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	3,890,936 - 3,934,285 (+)	NCBI		T2T-CHM13v2.0

Prpf4b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	35,058,803 - 35,090,047 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	35,059,285 - 35,090,047 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	13	34,874,820 - 34,906,064 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	34,875,302 - 34,906,064 (+)	Ensembl			mm10	GRCm38
MGSCv37	13	34,967,363 - 34,994,747 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	13	34,882,961 - 34,910,497 (+)	NCBI		MGSCv36	mm8
Celera	13	36,002,342 - 36,029,666 (+)	NCBI		Celera
Cytogenetic Map	13	A3.3	NCBI
cM Map	13	14.21	NCBI

Prpf4b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	30,190,721 - 30,230,153 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	17	30,193,907 - 30,225,420 (-)	Ensembl				GRCr8
mRatBN7.2	17	29,985,343 - 30,020,285 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	29,985,343 - 30,019,625 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	17	29,813,167 - 29,844,178 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	31,416,901 - 31,447,908 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	29,808,887 - 29,839,898 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	17	30,019,460 - 30,050,470 (-)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	17	29,996,698 - 30,027,708 (-)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	17	30,007,401 - 30,038,411 (-)	NCBI		Lyon_Hypertensive
F344_StmMcwi	17	30,054,465 - 30,085,475 (-)	NCBI		F344_StmMcwi
Rnor_6.0	17	30,680,454 - 30,714,542 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	30,683,640 - 30,714,495 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	17	32,580,447 - 32,614,537 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	17	36,319,606 - 36,350,616 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	17	29,558,539 - 29,589,473 (-)	NCBI		Celera
RGSC_v3.1	17	36,322,446 - 36,353,457 (-)	NCBI
Cytogenetic Map	17	p12	NCBI

Prp4k
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955465	9,359,634 - 9,392,913 (-)	Ensembl
ChiLan1.0	NW_004955465	9,359,634 - 9,392,913 (-)	NCBI	ChiLan1.0	ChiLan1.0

PRP4K
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	18,648,631 - 18,691,933 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	14,649,258 - 14,695,425 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	3,854,844 - 3,898,185 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	4,044,456 - 4,088,226 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	4,044,610 - 4,085,148 (+)	Ensembl			panPan2	panpan1.1

PRP4K
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	35	4,274,664 - 4,311,813 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	35	4,271,685 - 4,307,750 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	35	4,284,298 - 4,321,450 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	35	4,336,704 - 4,373,868 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	35	4,336,715 - 4,370,715 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	35	4,211,834 - 4,248,986 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	35	4,233,455 - 4,270,536 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	35	5,567,860 - 5,605,013 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Prp4k
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	20,110,397 - 20,149,962 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936534	8,382,485 - 8,418,938 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936534	8,379,386 - 8,418,963 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PRP4K
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	2,382,495 - 2,412,908 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	7	2,382,498 - 2,417,085 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	2,454,111 - 2,475,718 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Prp4k
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624756	21,038,438 - 21,082,607 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Prp4k
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	14	53,387,000 - 53,421,137 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in PRP4K
866 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
76	36	20	36	36	60	20

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007973815	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038005702	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038005703	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038005704	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038005705	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038005706	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038005707	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_073005629	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_073005630	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_073005631	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_493286	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_493287	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_493288	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_493289	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_493290	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_493291	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_493292	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_493293	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_493294	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_493295	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_493296	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JBLKOC010000017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000005318 ⟹ ENSCSAP00000003542

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	17	68,114,973 - 68,153,844 (-)	Ensembl

RefSeq Acc Id:

XM_007973815 ⟹ XP_007972006

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	17	68,110,544 - 68,153,939 (-)	NCBI
Vero_WHO_p1.0	NW_023666044	3,972,241 - 4,015,976 (+)	NCBI

Sequence:

show sequence

ATGCGCGGCAGCTCTTTTCCTTCTTCTTCCACTTCCACTACCTTCCACCGTCCGGGAGCCGCCG
CCACCGCCGCCGAGGAGTCAGGAAGTTCAAGATGGCCGCCGCGGAGACCCAGTCGCTGCGGGAG
CAGACAGAGATGGAAGATGCTAATTCTGAAAAGAGTGTAAATGAAGAAAATGGAGAAGTATCAG
AAGACCAGTCTCAAAATAAGCACAGTCGTCACAAAAAAAAGAAGCATAAACACAGAAGTAAACA
TAAGAAACATAAACATTCCTCAGAAGAAGACAAGGATAAAAAACATAAACATAAGCATAAACAC
AAGAAACACAAAAGAAAAGAGGTTATCGATGCTTCTGATAAAGAGGGTATGTCTCCAGCAAAAA
GAACTAAACTTGATGATTTAGCTTTGCTAGAAGACTTGGAAAAACAGAGAGCCTTGATTAAGGC
CGAACTTGATAATGAGTTAATGGAAGGAAAGGTCCAATCTGGTATGGGGCTCATTTTGCAAGGT
TATGAGTCTGGCTCTGAAGAAGAGGGGGAGATTCATGAGAAGGCAAGAAATGGAAATAGGTCTA
GTACTAGATCTTCAAGTACAAAGGGGAAACTTGAACTTGTGGACAATAAAAATACTACAAAAAA
ACGAAGTAAAAGCAGATCCAAAGAACGGACTAGACATAGGTCTGATAAAAAGAAAAGTAAGGGG
GGTATTGAAATCGTTAAAGAGAAAACAACTAGGAGCAAGTCAAAGGAGAGAAAAAAATCTAAAA
GTCCATCCAAAAGAAGTAAGTCTCAAGATCAAGCAAGGAAATCAAAATCCCCTATCCTTAGAAG
GCGATCTCAAGAGAAAATTGGTAAGGCCAGATCTCCTACTGATGATAAGGTTAAAGTCGAAGAT
AAAAGTAAATCAAAAGATAGGAAAAAATCCCCAATTGTAAATGAAAGTAGAAGTCGCGATCGAT
GTAAAAAGTCCAGATCCCCAGTTGATTTAAGAGGTAAATCCAAAGACGGAAGGTCACGGTCCAA
AGAGAGAAAATCAAAACGGTCTGAAACTGATAAAGAAAAGAAGCCAATTAAATCTCCCTCTAAA
GATGCTTCATCTGGGAAGGAAAATAGGTCACCCAGTAGAAGACCTGGTCGGAGTCCTAAAAGAA
GAAGTTTGTCTCCAAAACCACGTGATAAATCAAGAAGAAGCAGGTCTCCACTTTTAAATGATAG
AAGATCTAAGCAGAGCAAATCGCCCTCTCGAACACTGTCTCCTGGTAGAAGAGCCAAGAGCCGA
TCCTTAGAAAGAAAACGAAGAGAACCAGAGAGAAGACGACTTTCTTCTCCAAGAACACGACCTC
GAGATGATATCCTCAGTAGACGTGAAAGATCAAAAGATGCCAGCCCCATCAATAGATGGTCTCC
AACCCGAAGAAGAAGTAGATCTCCCATTAGAAGGAGGTCTCGTTCCCCACTCAGACGTAGCAGG
TCTCCAAGAAGAAGAAGCAGGTCTCCTCGGAGAAGGGACAGAGGTCGGAGGAGCAGATCACGCT
TGAGAAGACGGTCTCGATCACGGGGTGGTCGTAGACGAAGGAGCAGAAGCAAAGTAAAGGAAGA
TAAATTTAAAGGAAGTCTTTCTGAAGGAATGAAAGTTGAGCAGGAATCTTCGTCTGATGATAAC
CTTGAAGACTTTGATGTAGAGGAAGAAGATGAAGAAGCCCTGATAGAACAGAGAAGAATCCAAA
GGCAGGCAATTGTTCAGAAATATAAATACCTTGCTGAAGATAGCAATATGTCTGTGCCATCTGA
ACCAAGCAGCCCCCAGAGCAGTACGAGAACACGATCACCATCTCCAGATGACATTCTAGAGCGA
GTAGCTGCTGATGTTAAAGAGTATGAACGGGAAAACGTTGATACATTTGAGGCCTCAGTGAAAG
CCAAGCATAATCTAATGACAGTTGAACAGAATAATGGTTCATCTCAGAAGAAGTTGTTGGCACC
TGATATGTTTACAGAATCTGATGATATGTTTGCTGCGTATTTTGATAGTGCTCGTCTTCGGGCC
GCTGGCATTGGAAAAGATTTCAAAGAGAATCCCAACCTCAGAGATAACTGGACCGATGCAGAAG
GCTATTATCGTGTGAACATAGGTGAAGTCCTAGATAAACGTTACAATGTATATGGCTACACTGG
GCAAGGTGTATTCAGTAATGTTGTACGAGCCAGAGATAATGCAAGAGCCAACCAAGAAGTGGCT
GTAAAGATCATCAGAAACAATGAGCTCATGCAAAAGACTGGTTTAAAAGAACTAGAGTTCTTGA
AAAAACTTAATGATGCTGATCCTGATGACAAATTTCATTGTCTGCGACTCTTCAGGCACTTCTA
TCACAAACAGCATCTTTGTCTTGTATTCGAGCCTCTAAGTATGAACTTACGAGAGGTGTTAAAA
AAATATGGTAAAGATGTTGGTCTTCATATTAAAGCTGTAAGATCCTATAGTCAGCAGTTGTTCC
TGGCATTGAAACTCCTTAAAAGATGCAATATCCTACATGCAGATATCAAGCCAGACAATATCCT
GGTTAATGAATCAAAAACTATTTTAAAGCTTTGCGATTTTGGGTCGGCTTCACATGTTGCGGAT
AATGACATAACACCTTACCTTGTCAGTAGATTTTATCGTGCTCCTGAAATCATTATAGGTAAAA
GCTATGACTATGGTATAGATATGTGGTCTGTAGGTTGCACCTTATACGAACTCTATACTGGAAA
AATTTTATTCCCTGGCAAAACCAATAACCATATGCTGAAGCTTGCGATGGATCTCAAAGGAAAG
ATGCCAAATAAGATGATTCGAAAAGGTGTGTTCAAAGATCAGCATTTTGATCAAAATCTCAACT
TCATGTACATAGAAGTTGATAAAGTAACAGAGAGGGAGAAAGTTACTGTTATGAGCACCATTAA
TCCAACTAAGGACCTGTTGGCTGACTTGATTGGGTGCCAGAGACTTCCTGAAGACCAACGTAAG
AAAGTGCACCAGCTAAAGGACTTGTTGGACCAGATTCTGATGTTGGACCCAGCTAAACGAATTA
GCATCAACCAGGCCCTACAGCATGCCTTCATCCAGGAAAAAATTTAAACAAGATGAAGAAACTC
CAAGGGTTTGAGTAAATACAAAGACTGAAGAAATTTCACAGCAGTTTATTAATGTATATAAACT
TATAAATATTTCTCCAGCAAATTTGAGGAAGCATGATATATTTGAATTAACACCAAGGGTGATA
TTTCTTTTAGAAATGTTAGTTAATCTGTTTTGTGTCTTACGTGAAATTTCACTGTAGAACTGTT
TTAAATTGCCAAGACTGCACAAAATTACAGTGCTAATGTATATGGTTGCAGTTCACATAAAGAC
AAAAGCATCTGTTATAAAATGAGTAGTAGTATTGGGTGGTTGATTTGTTTTTAGCAGACTTGGC
TTCAGTTTGGTCTTGGAGAAAATGGCCAGCATAAATGCTGTTTATATTCACGTTTTCCTAGGTG
TGTGTGTGCAGGCCACAGCAGCATGCCCTTGGTGTAGTCAGTGCCGAAAGGGGTCTGTTCCTTC
TTGAGCCTGCCTGCAGGGATGGTCTCCTTTTAAAGCAGGTTGTGTGCAGCATTCAGTACACTGA
AGGTAAGCTAAACCATCAACATCTCTGGTGTTTTAAGATGTTATTTTATTGGAACAACTGACAA
ATGAGGGATGTTAGCTTTGTGGCAGAATTCCCTGCATGTGTGATAACTGATCTTGTTTTATTTT
TTGGCATTGCAACTGTGGCATAGTTACAATTTCTGTTTGTTCATCACATTTAAAATTGGAAGAG
AACGCGCTTGATGGATAGAGCGCCTTCAGTGTACTGTTTCTTATTAACTTTACTTTTTTAAAAT
CAACTTGCTATAGACTTTATATACATTTTGTTAAATATAGTTCCTAGTGACATAGAAACAATGC
GTAGTTTTCATTTACTAATTACAGATGTTGAGGCCTAATTCTGAAAGTCCTCATATTTAAAGGC
TAGATAGACAACGTAATGAAATTTTTAACTATTTGTATGTCATTTTGAAAGTGTACTGCTTTAT
GGTAAAAGTGTTTTTCATTTGTTCATTGTTTTCATTATTTGTGATCATGTTGTCTTTCAATACA
GGCATAAACCTTCCACTCTTGAACAAAGCAGCTGCTTTTTAAAAGCGGTAATTGCTTCTTTACC
TTTTATTTCTTTTGTAAATGAAGCTTTTCTTTAAGAATGTGACTTTAAAGTGTTGTCTATTGCA
TAAAACAGTTGACACTCACTTATTGTAAAGTGAAGATTGTTCTGCTGCATGTGAAGTGGACCAT
GCAGATTTCTGTATGTTCTCAGTATGCATCACTAGATAATAAAGTCTTTTGTGAACAAGGCATT
TGTAGCCATTTTTAAAAGCTTTTGTCTTCAGTGCTGGTAAGTCAGGTAAACCATAAATAGTTAT
TAAAAGCAACCTTTTGTTTTTTTCCTGAAAGTTTTTAATTGAAAGTATTATTAGTTAAAGATGT
AAACCTAGCCAAAAGTATCAGTTTATTAATAATTAGGATCCTAATTATTTCAAAAAATCCTACA
AATATTGTCAGCTTTCAGTGTAGTGAGATTATTCCTGTAGGTTATGGGGTATAATTCAGGATTT
AACTAATGTTTCTGCTATTTTCTCACTTTTCCTTTTGATGGTGCGGAAAGAGAAAAAGGAAAAC
GGGGCACAGGCCATTCAACGCCTTCTCCAAGGGGTCTGATTTGCTGAGACACCAGCTTCACCTT
CTTAACAAGGTTATTTCTGACAGCATGTGTAGATAAACATTTAGCAACAATTTAAGACAAAATC
GTGTAAATCAACTTGGTTTTGCAACACAAAGGAATTTGTATTATTAACATGGTAGAAGAGAATT
TTTCAGAAATATATGTAATCTTTTCTGTTTGGGGGGTAAAATTATTGCTTGTCTCCCTGAGGAA
TATGGAAAATAATCAGATTTTAGGGGTATAAATAATATTTTTAAATTGTAAATGGGATTTTTTT
ATTCACCCAGGCACGTAATTACAACAAGCATGCACATTTTGGTGCATTCAAGAATGGAAAATCA
GAATAGCAGCATTCTTCTGGTGGGTTTTGCTCCATTTAAAGACATGAAATGAACCACAGCCAGG
AAGGTGATAGATGATATAATAAGCCACCTCTGAACCTACACCCCGTCTCTTCACGGTTTAGACT
TACTAAAATAAATGCAAGGTGATTTTCATCTTCAGGTAGAGTGAAGCCTTTTAAATAAGGCGTC
ACGGGTGCAGCTATTCTACCTTAATGAAACGGGTAGTGATTTTCCCACCATTATTTATTTTGGT
GATAATATGCTGCATATTCAAGTCTTGTAGTTATTTTCACCCAAAGTAGTTGACAATTTGATGC
TTCTGGTGATGTTTATGGCTTCATTTTATATAATTTTTTAAGTAAGTTCCACTAGAAACAGTTC
ATCTTATACCTTCAAAACTATTACCTGTTCTTTAAAAACGAAGTTGCTTGTTACTTGTTCTTTG
TGTTTTAGGTGCAGCTCAGTGGAAGATGATGACAACCAGAAGACATGAGCTAAGGTTTCTGTCC
TATAAAAGATTTATTAAAAAACAATCCATTTAGTTTTTGTCTAATTTTTTAGTTTTCAGCATTA
TGATTTGGGTTTTATTGGTGTTTGGTATTTAGAATAGTAGTGCTATTGTGGTGTTCATCTGTAA
AGTGCTTGTTTTATCATACTTCCTGCCTCTCCCCCTCCCCCAGTTTCTTCTTCCCTAAAATAAA
AATAGTGGTCAACTTTAGTAATGTAAAAGGCTCTTGGATGCTGAGATTCCACATTAACACATGG
TTGTCAAAATTGGATCTTAAGGATCTTAGAAAAACAGCAACCACCAGAATAGCATATATCTAAA
AGTAGTCTTCAGCTTTAGGCAGATGCAAAAGAATAGAAACTGGAATACTAAGAATACTGTTCAA
CTCCTTTAGTATCTATTCCCCAACTTACCCTTTAGGAACCTCATTATTAACCAGTGTTCCAGTC
TTAAAGTAGACAAAATACTCAGAGCCATTGGTTTTATTTTTATTTTTTTTTTTAAGGGAAATGA
AGATGATACTGTGGGTTTTTTATGCCCCAGTGTAGCATATCTAGACTACCTATTTGAAAGGAAC
CCTATAAACTGTCTTATGTTCATATACATGATTTTCTTACACTCTGTAATTTGGCTGAGGTGCA
ATTTGGAACTTTGCAAGACCTACTAGATTGAATTTCTTTAGTGAATGCTCCTTAATAAATTTGC
ATTTATATTTTAGAGTAGCTGTATAGTTTTCAAATGCTATCTGCCATGAAGTTTTTGCTTTTAT
TATACTTTATGGCATAGTTTTCAAATGCTATCTGCCATAAAGTTTTTGCCATATTATACTTTAT
GGCAAACATGGTATCAAGTGATTGTCAGACTTGAGGACTCATAAAAGTCTTAGGTATGGACTAC
TATTCAAAGATGTTACAGTTTTTTCTAGGGTTAGAATAGTTGAGATCTAGAAAGCATAGACATT
TTTTACACTCTGGATAGACTTTATTCTTGAAGGTCATCAGAAATGAGGTTGGAATATCGAGGTT
TTGAGCAGGGGGAGCATCTTATATTCACCCTTAAATTGTTATTAATGCATCCCGTTTTCTTCAT
TCCCCAATAGCTATCTCATTTCACTGTCTCAAAATTTTGTTTTAAAATAATAGAAATGTTTTGC
CATTATTAAGTACCACTTTATTCCCAACAAAAATAAGTACTCAGGACTTTTTTTCAATATGAAA
TATTTATGTAATGTTTTATGGTATGTGGTAGAGGAAGTGAAATGTAATGTTCTCAGTTTTGTTC
CATATTTGCATTCCTTTTATGCTTTACCTGTATTTTATCATTTGTAAGCAGAACTCTAGCTATA
TGTATAGAAATAAAATCTCTGAGATGAAACAAAGGAATCACACATGATAAAATTTAGGCAAAGT
AGTTAAGAAATGGCCCTTTTGAATGTTGAAGATAGGAAAGTAGCCATATATTCAAATGTAATTT
TCCTCCTTTAGTTATAATGACATCTTTTCCAATTGGGCTTCATAAATGTGTTTCTTTCTTAATA
GTATCCTATTTCCAGCATATATTCAACATGAATTTTATCATTCTCCTCCTAATGGAATGTCTTC
CTTATAGAAATGTTCATGACAAATTCATTTGTTTTTTACATGTCAATAATGTATGCTAAATTAA
AATGTTTTCCAGTTATTCTGATAGATGTCATTATGGCATCCTTAATTTTTCTTCTCCTTCTGTA
TATAGGGGAAGGGACTGTTCTGAAGAACCTTTCCATTTAGTGATCAAGATATGGAAGCTGATTT
CTGAAAATGCTCAGTGTATATTCTAATTATTTGTGGTACCATTTGAACTGTAACTTGCATTTTA
GCAGCGCATGTTTCTAATTGACTTACTGGGAAACTGAATAAAATATGCCTCTTATTATCA

hide sequence

RefSeq Acc Id:

XM_038005702 ⟹ XP_037861630

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666044	3,972,371 - 4,015,976 (+)	NCBI

RefSeq Acc Id:

XM_038005703 ⟹ XP_037861631

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666044	3,972,371 - 4,015,976 (+)	NCBI

RefSeq Acc Id:

XM_038005704 ⟹ XP_037861632

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666044	3,972,371 - 4,015,976 (+)	NCBI

RefSeq Acc Id:

XM_038005705 ⟹ XP_037861633

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666044	3,972,241 - 4,015,978 (+)	NCBI

RefSeq Acc Id:

XM_038005706 ⟹ XP_037861634

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666044	3,972,344 - 4,015,978 (+)	NCBI

RefSeq Acc Id:

XM_038005707 ⟹ XP_037861635

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666044	3,972,241 - 4,015,976 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_037861631	(Get FASTA)	NCBI Sequence Viewer
	XP_037861634	(Get FASTA)	NCBI Sequence Viewer
	XP_072861730	(Get FASTA)	NCBI Sequence Viewer
	XP_072861731	(Get FASTA)	NCBI Sequence Viewer
	XP_072861732	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000003542.1

RefSeq Acc Id:

XP_007972006 ⟸ XM_007973815

Ensembl Acc Id:

ENSCSAP00000003542 ⟸ ENSCSAT00000005318

RefSeq Acc Id:

XP_037861633 ⟸ XM_038005705

RefSeq Acc Id:

XP_037861635 ⟸ XM_038005707

RefSeq Acc Id:	XP_037861634 ⟸ XM_038005706
- UniProtKB:	A0A0D9R4K3 (UniProtKB/TrEMBL)

RefSeq Acc Id:

XP_037861630 ⟸ XM_038005702

RefSeq Acc Id:	XP_037861631 ⟸ XM_038005703
- UniProtKB:	A0A0D9R4K3 (UniProtKB/TrEMBL)

RefSeq Acc Id:

XP_037861632 ⟸ XM_038005704

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000007273	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000005318.1	UniProtKB/TrEMBL
Gene3D-CATH	Phosphorylase Kinase, domain 1	UniProtKB/TrEMBL
	Transferase(Phosphotransferase) domain 1	UniProtKB/TrEMBL
InterPro	Kinase-like_dom_sf	UniProtKB/TrEMBL
	Prot_kinase_dom	UniProtKB/TrEMBL
	Ser/Thr_kinase_AS	UniProtKB/TrEMBL
	Ser_Thr_dual-spec_kinase	UniProtKB/TrEMBL
	STKc_PRP4	UniProtKB/TrEMBL
KEGG Report	csab:103222263	UniProtKB/TrEMBL
NCBI Gene	PRPF4B	ENTREZGENE
PANTHER	DUAL SPECIFICITY PROTEIN KINASE	UniProtKB/TrEMBL
	MITOGEN-ACTIVATED PROTEIN KINASE-RELATED	UniProtKB/TrEMBL
Pfam	Pkinase	UniProtKB/TrEMBL
PROSITE	PROTEIN_KINASE_DOM	UniProtKB/TrEMBL
	PROTEIN_KINASE_ST	UniProtKB/TrEMBL
SMART	S_TKc	UniProtKB/TrEMBL
Superfamily-SCOP	SSF56112	UniProtKB/TrEMBL
UniProt	A0A0D9R4K3	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2023-12-26	PRP4K	pre-mRNA processing factor kinase PRP4K	PRPF4B	pre-mRNA processing factor 4B	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message