FOSL1 (FOS like 1, AP-1 transcription factor subunit) - Rat Genome Database

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Pathways
Gene: FOSL1 (FOS like 1, AP-1 transcription factor subunit) Chlorocebus sabaeus
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Symbol: FOSL1
Name: FOS like 1, AP-1 transcription factor subunit
RGD ID: 18456064
Description: ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); female pregnancy (ortholog); gene expression (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); cervical squamous cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN presynaptic membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: fos-related antigen 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.118,356,263 - 8,365,606 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl18,356,836 - 8,364,918 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666038105,645,101 - 105,654,787 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
FOSL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.118,356,263 - 8,365,606 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl18,356,836 - 8,364,918 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666038105,645,101 - 105,654,787 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
FOSL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381165,892,049 - 65,900,545 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1165,892,049 - 65,900,573 (-)Ensemblhg38GRCh38
GRCh371165,659,520 - 65,668,016 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361165,416,268 - 65,424,573 (-)NCBIBuild 36Build 36hg18NCBI36
Build 341165,416,267 - 65,424,573NCBI
Celera1162,983,599 - 62,991,910 (-)NCBICelera
Cytogenetic Map11q13.1NCBI
HuRef1161,986,283 - 61,994,593 (-)NCBIHuRef
CHM1_11165,544,106 - 65,552,418 (-)NCBICHM1_1
T2T-CHM13v2.01165,885,111 - 65,893,612 (-)NCBIT2T-CHM13v2.0
Fosl1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39195,497,726 - 5,505,966 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl195,497,575 - 5,505,974 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38195,447,698 - 5,455,938 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl195,447,547 - 5,455,946 (+)Ensemblmm10GRCm38
MGSCv37195,447,698 - 5,455,938 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36195,447,698 - 5,455,938 (+)NCBIMGSCv36mm8
Celera195,319,672 - 5,327,911 (+)NCBICelera
Cytogenetic Map19ANCBI
cM Map194.33NCBI
Fosl1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81212,183,885 - 212,192,391 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1212,183,833 - 212,192,391 (+)EnsemblGRCr8
mRatBN7.21202,754,549 - 202,763,057 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1202,754,529 - 202,764,930 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1211,106,898 - 211,115,363 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01218,199,949 - 218,208,463 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01210,890,991 - 210,899,504 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd1211,547,442 - 211,555,909 (+)NCBIDahl_SR_JrHsd
Lyon_Normotensive1216,456,211 - 216,464,678 (+)NCBILyon_Normotensive
Lyon_Hypertensive1213,208,203 - 213,216,712 (+)NCBILyon_Hypertensive
F344_StmMcwi1211,443,611 - 211,452,078 (+)NCBIF344_StmMcwi
Rnor_6.01220,826,560 - 220,835,066 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1220,826,560 - 220,835,066 (+)Ensemblrn6Rnor6.0
Rnor_5.01227,755,887 - 227,764,393 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41208,090,612 - 208,099,118 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1200,290,637 - 200,299,144 (+)NCBICelera
RGSC_v3.11208,244,064 - 208,252,571 (+)NCBI
Cytogenetic Map1q43NCBI
Fosl1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542219,423,591 - 19,433,885 (+)Ensembl
ChiLan1.0NW_00495542219,425,741 - 19,431,801 (+)NCBIChiLan1.0ChiLan1.0
FOSL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2967,120,758 - 67,129,158 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11168,163,562 - 68,172,119 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01161,252,513 - 61,261,032 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11164,581,841 - 64,589,300 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1164,581,841 - 64,589,304 (-)EnsemblpanPan2panpan1.1
FOSL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11851,366,719 - 51,374,411 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1851,368,352 - 51,373,748 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1849,975,212 - 49,982,921 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01852,404,801 - 52,412,502 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1852,405,480 - 52,411,838 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11851,504,866 - 51,512,571 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01851,079,242 - 51,086,930 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01851,868,548 - 51,876,244 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Fosl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049477,199,963 - 7,206,564 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365993,642,504 - 3,648,417 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365993,642,504 - 3,649,294 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FOSL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl26,430,153 - 6,436,173 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.126,430,158 - 6,436,173 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.225,534,085 - 5,540,201 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Fosl1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476720,519,313 - 20,524,554 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462476720,519,054 - 20,525,311 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Fosl1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v122,218,472 - 2,226,676 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in FOSL1
151 total Variants

Expression

RNA-SEQ Expression

ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
71 33 19 35 35 55 17

Sequence


Ensembl Acc Id: ENSCSAT00000006099   ⟹   ENSCSAP00000004309
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl18,356,836 - 8,364,918 (+)Ensembl
RefSeq Acc Id: XM_007980481   ⟹   XP_007978672
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.118,356,263 - 8,365,606 (+)NCBI
Vero_WHO_p1.0NW_023666038105,645,103 - 105,654,787 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007980562   ⟹   XP_007978753
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.118,356,265 - 8,365,606 (+)NCBI
Vero_WHO_p1.0NW_023666038105,645,107 - 105,654,787 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007980645   ⟹   XP_007978836
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.118,356,263 - 8,365,606 (+)NCBI
Vero_WHO_p1.0NW_023666038105,645,101 - 105,654,787 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_007978753 (Get FASTA)   NCBI Sequence Viewer  
  XP_007978836 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000004309
  ENSCSAP00000004309.1
RefSeq Acc Id: XP_007978672   ⟸   XM_007980481
- Peptide Label: isoform X1
RefSeq Acc Id: XP_007978836   ⟸   XM_007980645
- Peptide Label: isoform X3
RefSeq Acc Id: XP_007978753   ⟸   XM_007980562
- Peptide Label: isoform X2
- UniProtKB: A0A0D9R6S0 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCSAP00000004309   ⟸   ENSCSAT00000006099


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000008055 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000006099.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.5.170 UniProtKB/TrEMBL
InterPro AP-1 UniProtKB/TrEMBL
  bZIP UniProtKB/TrEMBL
  bZIP_sf UniProtKB/TrEMBL
NCBI Gene FOSL1 ENTREZGENE
PANTHER PTHR23351 UniProtKB/TrEMBL
  PTHR23351:SF6 UniProtKB/TrEMBL
Pfam bZIP_1 UniProtKB/TrEMBL
PRINTS LEUZIPPRFOS UniProtKB/TrEMBL
PROSITE BZIP UniProtKB/TrEMBL
  BZIP_BASIC UniProtKB/TrEMBL
SMART BRLZ UniProtKB/TrEMBL
Superfamily-SCOP SSF57959 UniProtKB/TrEMBL
UniProt A0A0D9R6S0 ENTREZGENE, UniProtKB/TrEMBL