Styx-ps2 (serine/threonine/tyrosine interacting protein, pseudogene 2) - Rat Genome Database

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Gene: Styx-ps2 (serine/threonine/tyrosine interacting protein, pseudogene 2) Rattus norvegicus
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Symbol: Styx-ps2
Name: serine/threonine/tyrosine interacting protein, pseudogene 2
RGD ID: 1597718
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: LOC685165; similar to serine/threonine/tyrosine interacting protein
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81444,640,316 - 44,640,986 (-)NCBIGRCr8GRCr8GRCr8
mRatBN7.21444,286,727 - 44,287,397 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.01445,950,986 - 45,951,673 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01445,755,728 - 45,756,398 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41446,954,208 - 46,954,878 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1443,428,832 - 43,429,519 (-)NCBICelera
Cytogenetic Map14p11NCBI
JBrowse:




References

Genomics

Variants

.
Variants in Styx-ps2
2 total Variants

QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2313089Bss81Bone structure and strength QTL 813.40.0001body length (VT:0001256)body length, nose to rump (CMO:0000079)143802371083023710Rat
70214Niddm28Non-insulin dependent diabetes mellitus QTL 284.06blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)143900944484009444Rat
1300154Bp189Blood pressure QTL 1893.04arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)143123808072970315Rat
70187Pancm5Pancreatic morphology QTL 516.7pancreas mass (VT:0010144)pancreas weight to body weight ratio (CMO:0000630)143067446985041098Rat
631523Pia13Pristane induced arthritis QTL 133.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1433424686102238540Rat
1358296Ael3Aortic elastin QTL 33.70.00051aorta elastin amount (VT:0003905)aortic elastin14862139853621398Rat
2313100Bss82Bone structure and strength QTL 8230.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143802371083023710Rat
7387267Uae42Urinary albumin excretion QTL 420.61urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)142252151767521517Rat
631839Niddm37Non-insulin dependent diabetes mellitus QTL 373.37blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1411334716100078267Rat
2313397Coatc1Coat color QTL1coat/hair pigmentation trait (VT:0010463)coat/hair color measurement (CMO:0001808)141889519263895192Rat
631262Tcas4Tongue tumor susceptibility QTL 47.29tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)141790672654251504Rat
1300136Rf22Renal function QTL 223.9renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)144261625899224555Rat
2313048Bss84Bone structure and strength QTL 843.10.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)143802371083023710Rat
2302045Pia39Pristane induced arthritis QTL 394.90.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G2a level (CMO:0002116)14862139853621398Rat
738037Hcas6Hepatocarcinoma susceptibility QTL 62.93liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)143941117087582095Rat
2313084Bss83Bone structure and strength QTL 832.90.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)143802371083023710Rat


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-15698 BioCyc
NCBI Gene 685165 ENTREZGENE
PhenoGen Styx-ps2 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Styx-ps2  serine/threonine/tyrosine interacting protein, pseudogene 2  LOC685165  similar to serine/threonine/tyrosine interacting protein  Symbol and Name Changed 1299863 APPROVED
2008-01-09 LOC685165  similar to serine/threonine/tyrosine interacting protein  LOC687417  similar to serine/threonine/tyrosine interacting protein  Data merged from RGD:1585387 1643240 APPROVED
2006-11-20 LOC685165  similar to serine/threonine/tyrosine interacting protein      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-19 LOC687417  similar to serine/threonine/tyrosine interacting protein      Symbol and Name status set to provisional 70820 PROVISIONAL