Dhx34 (DExH-box helicase 34) - Rat Genome Database

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Gene: Dhx34 (DExH-box helicase 34) Rattus norvegicus
Analyze
Symbol: Dhx34
Name: DExH-box helicase 34
RGD ID: 1584452
Description: Predicted to enable ATP hydrolysis activity; RNA binding activity; and helicase activity. Predicted to be involved in negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; and positive regulation of phosphorylation. Orthologous to human DHX34 (DExH-box helicase 34); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; acrylamide; amitrole.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: DEAH (Asp-Glu-Ala-His) box polypeptide 34; DEAH-box helicase 34; LOC684903; probable ATP-dependent RNA helicase DHX34; similar to Probable ATP-dependent RNA helicase DHX34 (DEAH box protein 34); uncharacterized protein LOC684903
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8186,009,047 - 86,034,477 (-)NCBIGRCr8
mRatBN7.2176,880,867 - 76,905,148 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl176,880,867 - 76,905,113 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx182,254,983 - 82,279,262 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0190,819,014 - 90,843,293 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0184,010,088 - 84,034,367 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0178,069,260 - 78,112,488 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl178,090,044 - 78,112,488 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0179,335,776 - 79,377,748 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera171,370,891 - 71,395,199 (-)NCBICelera
Cytogenetic Map1q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:19946888   PMID:22681889   PMID:23828042  


Genomics

Comparative Map Data
Dhx34
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8186,009,047 - 86,034,477 (-)NCBIGRCr8
mRatBN7.2176,880,867 - 76,905,148 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl176,880,867 - 76,905,113 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx182,254,983 - 82,279,262 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0190,819,014 - 90,843,293 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0184,010,088 - 84,034,367 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0178,069,260 - 78,112,488 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl178,090,044 - 78,112,488 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0179,335,776 - 79,377,748 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera171,370,891 - 71,395,199 (-)NCBICelera
Cytogenetic Map1q21NCBI
DHX34
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381947,349,315 - 47,382,704 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1947,349,312 - 47,383,247 (+)EnsemblGRCh38hg38GRCh38
GRCh371947,852,572 - 47,885,961 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361952,544,386 - 52,577,795 (+)NCBINCBI36Build 36hg18NCBI36
Celera1944,656,435 - 44,689,848 (+)NCBICelera
Cytogenetic Map19q13.32NCBI
HuRef1944,277,052 - 44,310,449 (+)NCBIHuRef
CHM1_11947,854,726 - 47,888,154 (+)NCBICHM1_1
T2T-CHM13v2.01950,174,779 - 50,208,160 (+)NCBIT2T-CHM13v2.0
Dhx34
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39715,931,145 - 15,956,005 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl715,931,072 - 15,955,962 (-)EnsemblGRCm39 Ensembl
GRCm38716,197,220 - 16,222,078 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl716,197,147 - 16,222,037 (-)EnsemblGRCm38mm10GRCm38
MGSCv37716,782,570 - 16,807,381 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36715,355,745 - 15,380,515 (-)NCBIMGSCv36mm8
MGSCv36711,330,338 - 11,354,822 (-)NCBIMGSCv36mm8
Celera714,724,171 - 14,725,642 (+)NCBICelera
Cytogenetic Map7A2NCBI
cM Map78.76NCBI
Dhx34
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555741,248,021 - 1,267,399 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555741,248,058 - 1,267,399 (+)NCBIChiLan1.0ChiLan1.0
DHX34
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22053,496,233 - 53,530,417 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11955,366,213 - 55,400,020 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01944,337,299 - 44,371,403 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11952,992,655 - 53,026,644 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1952,996,392 - 53,026,046 (+)Ensemblpanpan1.1panPan2
DHX34
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11108,610,896 - 108,634,594 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1108,521,685 - 108,634,105 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1108,089,515 - 108,120,001 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01109,134,020 - 109,164,509 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1109,136,110 - 109,164,431 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11108,801,005 - 108,831,486 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01108,445,539 - 108,476,024 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01109,314,102 - 109,344,588 (-)NCBIUU_Cfam_GSD_1.0
Dhx34
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934919,437,829 - 19,464,153 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366641,055,941 - 1,085,924 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366641,056,003 - 1,082,282 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DHX34
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl653,131,241 - 53,161,368 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1653,131,193 - 53,161,369 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2648,557,169 - 48,587,313 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DHX34
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1640,680,406 - 40,717,512 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl640,680,468 - 40,717,354 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607320,414,558 - 20,451,865 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dhx34
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248326,384,317 - 6,400,612 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248326,384,317 - 6,400,622 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Dhx34
129 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:30
Count of miRNA genes:20
Interacting mature miRNAs:22
Transcripts:ENSRNOT00000075327
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331732Srn4Serum renin concentration QTL 44.467renin activity (VT:0005581)plasma renin activity level (CMO:0000116)13523959878430678Rat
2313059Bss55Bone structure and strength QTL 553.20.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143284731118944897Rat
631688Hcas2Hepatocarcinoma susceptibility QTL 230.0001liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)15925874115540829Rat
1578649Bmd8Bone mineral density QTL 84.9femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)14939317294393172Rat
1358359Sradr1Stress Responsive Adrenal Weight QTL 14.74adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)130882023123479925Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)149393289199050459Rat
4889929Bss87Bone structure and strength QTL 876.7tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)15389511782174945Rat
1331792Rf29Renal function QTL 294.589urine potassium amount (VT:0010539)urine potassium level (CMO:0000128)13523959878430678Rat
2313062Bmd73Bone mineral density QTL 733.90.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)11148131282174945Rat
8552900Pigfal1Plasma insulin-like growth factor 1 level QTL 17.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)13483685879836858Rat
1578654Bss10Bone structure and strength QTL 104femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)149393172159356837Rat
1554320Bmd1Bone mineral density QTL 112.20.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)150910886060548Rat
1354643Foco2Food consumption QTL 27.170.0001eating behavior trait (VT:0001431)food intake rate (CMO:0000427)13344984878449848Rat
2302059Pia36Pristane induced arthritis QTL 363.80.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)14333300288333002Rat
2313065Bss67Bone structure and strength QTL 673.10.0001tibia area (VT:1000281)tibia total energy absorbed before break (CMO:0001736)11148131282174945Rat
1300121Hrtrt1Heart rate QTL 13.7heart pumping trait (VT:2000009)heart rate (CMO:0000002)165789093115540829Rat
7421628Bp361Blood pressure QTL 3610.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)166023617118608521Rat
2313069Bss68Bone structure and strength QTL 682.90.0001tibia size trait (VT:0100001)tibia total energy absorbed before break (CMO:0001736)11148131282174945Rat
631495Bp96Blood pressure QTL 964.52arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)122340647102268831Rat
2313075Bss66Bone structure and strength QTL 663.40.0001tibia length (VT:0004357)tibia length (CMO:0000450)11148131282174945Rat
70225Bp58Blood pressure QTL 583.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132356093162846471Rat
631512Scl6Serum cholesterol level QTL 69.6blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)17219768090508767Rat
2298545Neuinf8Neuroinflammation QTL 84.6nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)157336763151090257Rat
2313072Bss53Bone structure and strength QTL 534.30.0001tibia length (VT:0004357)tibia length (CMO:0000450)143284731118944897Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132737458199368955Rat
2313078Bss54Bone structure and strength QTL 543.50.0001tibia area (VT:1000281)tibia midshaft cross-sectional area (CMO:0001717)143284731118944897Rat
2313077Bss69Bone structure and strength QTL 693.50.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)11148131282174945Rat
1331778Rf28Renal function QTL 284.66urine potassium amount (VT:0010539)urine potassium excretion rate (CMO:0000761)14580314078430678Rat
2313402Anxrr24Anxiety related response QTL 24aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)148963584144267916Rat
1331785Rf27Renal function QTL 274.643urine sodium amount (VT:0006274)urine sodium level (CMO:0000129)12887978078430678Rat
61342Bp27Blood pressure QTL 273.40.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)15673266898773277Rat
1300172Bp172Blood pressure QTL 1723.56arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)13273727390665040Rat
4889962Bss94Bone structure and strength QTL 943.8tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)14936146582174945Rat
2313094Bss58Bone structure and strength QTL 583.70.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)143284731118944897Rat
6903308Scl36Serum cholesterol QTL 3620.0125blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)15386304190532583Rat
2313092Bmd72Bone mineral density QTL 722.50.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)11148131282174945Rat
2300164Bmd44Bone mineral density QTL 445.40.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)156949932101949932Rat
2313099Bss56Bone structure and strength QTL 562.40.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)143284731118944897Rat
2313098Bmd70Bone mineral density QTL 703.60.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)143284731118944897Rat
2313097Bss70Bone structure and strength QTL 703.50.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)11148131282174945Rat
9589820Insglur3Insulin/glucose ratio QTL 310.750.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)13483685879836858Rat
152025249Scl82Serum cholesterol level QTL 824.77blood cholesterol amount (VT:0000180)15034351099980958Rat
1354599Bw29Body weight QTL 293.460.001body mass (VT:0001259)body weight (CMO:0000012)13344984878449848Rat
4889919Bss86Bone structure and strength QTL 864.1tibia area (VT:1000281)tibia midshaft total cross-sectional area (CMO:0001715)15389511782174945Rat
8552948Pigfal11Plasma insulin-like growth factor 1 level QTL 114.7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)13483685879836858Rat
2313051Bss57Bone structure and strength QTL 573.70.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)143284731118944897Rat

Markers in Region
RH140798  
Rat AssemblyChrPosition (strand)SourceJBrowse
Celera171,370,972 - 71,371,096UniSTS
RH 3.4 Map1777.6UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence


Ensembl Acc Id: ENSRNOT00000075327   ⟹   ENSRNOP00000066304
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl176,880,867 - 76,905,113 (-)Ensembl
Rnor_6.0 Ensembl178,090,322 - 78,112,488 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000089718   ⟹   ENSRNOP00000071819
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl178,090,044 - 78,110,786 (-)Ensembl
RefSeq Acc Id: NM_001271452   ⟹   NP_001258381
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8186,009,047 - 86,033,293 (-)NCBI
mRatBN7.2176,880,867 - 76,905,113 (-)NCBI
Rnor_6.0178,069,260 - 78,112,488 (-)NCBI
Rnor_5.0179,335,776 - 79,377,748 (-)NCBI
Celera171,370,891 - 71,395,199 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039090848   ⟹   XP_038946776
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8186,009,109 - 86,034,280 (-)NCBI
mRatBN7.2176,880,926 - 76,905,148 (-)NCBI
RefSeq Acc Id: XM_039090858   ⟹   XP_038946786
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8186,009,109 - 86,033,278 (-)NCBI
mRatBN7.2176,880,926 - 76,904,284 (-)NCBI
RefSeq Acc Id: XM_039090865   ⟹   XP_038946793
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8186,009,109 - 86,032,278 (-)NCBI
mRatBN7.2176,880,926 - 76,904,065 (-)NCBI
RefSeq Acc Id: XM_039090875   ⟹   XP_038946803
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8186,009,109 - 86,028,444 (-)NCBI
mRatBN7.2176,880,926 - 76,900,277 (-)NCBI
RefSeq Acc Id: XM_039090878   ⟹   XP_038946806
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8186,019,649 - 86,034,477 (-)NCBI
mRatBN7.2176,891,470 - 76,905,145 (-)NCBI
RefSeq Acc Id: XM_063273855   ⟹   XP_063129925
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8186,019,902 - 86,033,278 (-)NCBI
RefSeq Acc Id: NP_001258381   ⟸   NM_001271452
- UniProtKB: M0R9X1 (UniProtKB/TrEMBL),   A6J8A0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000066304   ⟸   ENSRNOT00000075327
Ensembl Acc Id: ENSRNOP00000071819   ⟸   ENSRNOT00000089718
RefSeq Acc Id: XP_038946776   ⟸   XM_039090848
- Peptide Label: isoform X1
- UniProtKB: M0R9X1 (UniProtKB/TrEMBL),   A6J8A0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038946786   ⟸   XM_039090858
- Peptide Label: isoform X1
- UniProtKB: M0R9X1 (UniProtKB/TrEMBL),   A6J8A0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038946793   ⟸   XM_039090865
- Peptide Label: isoform X1
- UniProtKB: M0R9X1 (UniProtKB/TrEMBL),   A6J8A0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038946803   ⟸   XM_039090875
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038946806   ⟸   XM_039090878
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063129925   ⟸   XM_063273855
- Peptide Label: isoform X3
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2K1F5-F1-model_v2 AlphaFold A0A0G2K1F5 1-1129 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13689728
Promoter ID:EPDNEW_R252
Type:single initiation site
Name:Dhx34_1
Description:DExH-box helicase 34
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0178,112,478 - 78,112,538EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1584452 AgrOrtholog
BioCyc Gene G2FUF-60620 BioCyc
Ensembl Genes ENSRNOG00000047575 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000075327.3 UniProtKB/TrEMBL
Gene3D-CATH 1.20.120.1080 UniProtKB/TrEMBL
  3.40.50.300 UniProtKB/TrEMBL
InterPro DEAD/DEAH_box_helicase_dom UniProtKB/TrEMBL
  DUF1605 UniProtKB/TrEMBL
  HA2_WH UniProtKB/TrEMBL
  Helicase-assoc_dom UniProtKB/TrEMBL
  Helicase_ATP-bd UniProtKB/TrEMBL
  Helicase_C UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
KEGG Report rno:684903 UniProtKB/TrEMBL
NCBI Gene 684903 ENTREZGENE
PANTHER ATP-DEPENDENT RNA HELICASE UniProtKB/TrEMBL
  ATP-DEPENDENT RNA HELICASE DHX34-RELATED UniProtKB/TrEMBL
Pfam DEAD UniProtKB/TrEMBL
  HA2 UniProtKB/TrEMBL
  HA2_C UniProtKB/TrEMBL
  Helicase_C UniProtKB/TrEMBL
  OB_NTP_bind UniProtKB/TrEMBL
PhenoGen Dhx34 PhenoGen
PROSITE HELICASE_ATP_BIND_1 UniProtKB/TrEMBL
  HELICASE_CTER UniProtKB/TrEMBL
RatGTEx ENSRNOG00000047575 RatGTEx
SMART DEXDc UniProtKB/TrEMBL
  HA2 UniProtKB/TrEMBL
  HELICc UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
UniProt A6J8A0 ENTREZGENE, UniProtKB/TrEMBL
  M0R9X1 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-10-05 Dhx34  DExH-box helicase 34  Dhx34  DEAH-box helicase 34  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2016-01-13 Dhx34  DEAH-box helicase 34  Dhx34  DEAH (Asp-Glu-Ala-His) box polypeptide 34  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2013-08-13 Dhx34  DEAH (Asp-Glu-Ala-His) box polypeptide 34  LOC684903  similar to Probable ATP-dependent RNA helicase DHX34 (DEAH box protein 34)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-11-19 LOC684903  similar to Probable ATP-dependent RNA helicase DHX34 (DEAH box protein 34)      Symbol and Name status set to provisional 70820 PROVISIONAL