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Gene: Phf8 (PHD finger protein 8) Rattus norvegicus

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Symbol:

Phf8

Name:

PHD finger protein 8

RGD ID:

1561065

Description:

Predicted to enable several functions, including histone H3K4me3 reader activity; histone demethylase activity; and transition metal ion binding activity. Predicted to be involved in G1/S transition of mitotic cell cycle; chromatin remodeling; and positive regulation of macromolecule biosynthetic process. Predicted to be located in nucleolus. Human ortholog(s) of this gene implicated in syndromic X-linked intellectual disability Siderius type. Orthologous to human PHF8 (PHD finger protein 8); PARTICIPATES IN histone modification pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; acrylamide.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

histone lysine demethylase PHF8; hypothetical protein LOC317425; LOC102550078; LOC317425; RGD1561065; similar to mKIAA1111 protein; uncharacterized LOC102550078; uncharacterized protein LOC317425

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PHF8 (PHD finger protein 8)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Phf8 (PHD finger protein 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Phf8 (PHD finger protein 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PHF8 (PHD finger protein 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PHF8 (PHD finger protein 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Phf8 (PHD finger protein 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PHF8 (PHD finger protein 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PHF8 (PHD finger protein 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Phf8 (PHD finger protein 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Phf8 (PHD finger protein 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	PHF8 (PHD finger protein 8)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	PHF8 (PHD finger protein 8)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Mus musculus (house mouse):	Phf8 (PHD finger protein 8)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	phf8 (PHD finger protein 8)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	JHD1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OrthoFinder\|OrthoInspector)
Saccharomyces cerevisiae (baker's yeast):	JHD1	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector)
Caenorhabditis elegans (roundworm):	jmjd-1.1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	jmjd-1.1	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	jmjd-1.2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	jmjd-1.2	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	phf8	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	phf8	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	23,967,126 - 24,066,473 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	X	23,967,556 - 24,066,471 (+)	Ensembl				GRCr8
mRatBN7.2	X	20,524,103 - 20,623,459 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	20,524,558 - 20,623,410 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	X	17,962,664 - 18,060,911 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	22,062,670 - 22,160,921 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	21,053,800 - 21,152,651 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	21,063,487 - 21,168,750 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	21,063,562 - 21,168,750 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	X	22,281,640 - 22,387,057 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	X	40,869,942 - 40,970,244 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	X	20,777,198 - 20,875,387 (+)	NCBI		Celera
Cytogenetic Map	X	q12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

intellectual disability (ISO)

prostate cancer (ISO)

syndromic X-linked intellectual disability Siderius type (ISO,ISS)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP,ISO)

17beta-hydroxy-5alpha-androstan-3-one (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (ISO)

acrylamide (EXP,ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

cadmium dichloride (ISO)

caffeine (ISO)

CGP 52608 (ISO)

choline (ISO)

ciguatoxin CTX1B (ISO)

cisplatin (ISO)

coumarin (ISO)

Dibutyl phosphate (ISO)

dicrotophos (ISO)

dioxygen (ISO)

diquat (ISO)

doxorubicin (ISO)

folic acid (ISO)

FR900359 (ISO)

fulvestrant (ISO)

genistein (ISO)

L-methionine (ISO)

lead diacetate (ISO)

leflunomide (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

methapyrilene (ISO)

methotrexate (ISO)

nitric oxide (ISO)

paracetamol (EXP,ISO)

perfluorooctane-1-sulfonic acid (ISO)

quercetin (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

trichloroethene (EXP)

triptonide (ISO)

troglitazone (ISO)

tungsten (ISO)

urethane (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

chromatin organization (IEA)

chromatin remodeling (IBA,IEA)

G1/S transition of mitotic cell cycle (IEA,ISO)

negative regulation of rDNA heterochromatin formation (IEA,ISO)

positive regulation of DNA-templated transcription (IEA,ISO)

positive regulation of transcription by RNA polymerase I (IEA,ISO)

positive regulation of transcription by RNA polymerase II (IEA,ISO)

regulation of transcription by RNA polymerase II (IBA)

Cellular Component

nucleolus (IEA,ISO)

nucleoplasm (IEA,ISO)

nucleus (IEA,ISO)

Molecular Function

chromatin binding (IEA,ISO)

dioxygenase activity (IEA)

histone demethylase activity (IBA,IEA,ISO)

histone H3K27me2/H3K27me3 demethylase activity (IEA,ISO)

histone H3K36 demethylase activity (IEA,ISO)

histone H3K4me3 reader activity (IEA,ISO)

histone H3K9 demethylase activity (IEA,ISO)

histone H3K9me/H3K9me2 demethylase activity (IEA,ISO)

histone H4K20 demethylase activity (IEA,ISO)

iron ion binding (IEA,ISO)

metal ion binding (IEA)

oxidoreductase activity (IEA)

protein binding (ISO)

transcription coregulator activity (IBA)

zinc ion binding (IEA,ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

histone modification pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Systematic knockdown of epigenetic enzymes identifies a novel histone demethylase PHF8 overexpressed in prostate cancer with an impact on cell proliferation, migration and invasion.	Bjorkman M, etal., Oncogene. 2012 Jul 19;31(29):3444-56. doi: 10.1038/onc.2011.512. Epub 2011 Nov 28.
2.	Histone lysine methylation dynamics: establishment, regulation, and biological impact.	Black JC, etal., Mol Cell. 2012 Nov 30;48(4):491-507. doi: 10.1016/j.molcel.2012.11.006.
3.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
5.	GOA pipeline	RGD automated data pipeline
6.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
8.	Comprehensive gene review and curation	RGD comprehensive gene curation

Additional References at PubMed

PMID:19843542	PMID:20023638	PMID:20208542	PMID:20346720	PMID:20622853	PMID:20622854	PMID:21029866

Genomics

Comparative Map Data

Phf8
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	23,967,126 - 24,066,473 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	X	23,967,556 - 24,066,471 (+)	Ensembl				GRCr8
mRatBN7.2	X	20,524,103 - 20,623,459 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	20,524,558 - 20,623,410 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	X	17,962,664 - 18,060,911 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	22,062,670 - 22,160,921 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	21,053,800 - 21,152,651 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	21,063,487 - 21,168,750 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	21,063,562 - 21,168,750 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	X	22,281,640 - 22,387,057 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	X	40,869,942 - 40,970,244 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	X	20,777,198 - 20,875,387 (+)	NCBI		Celera
Cytogenetic Map	X	q12	NCBI

PHF8
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	53,936,680 - 54,048,936 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	53,936,676 - 54,048,958 (-)	Ensembl			hg38	GRCh38
GRCh37	X	53,963,113 - 54,071,569 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	53,979,838 - 54,087,036 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	X	53,846,135 - 53,953,332	NCBI
Celera	X	57,794,656 - 57,902,802 (-)	NCBI		Celera
Cytogenetic Map	X	p11.22	NCBI
HuRef	X	51,017,153 - 51,124,050 (-)	NCBI		HuRef
CHM1_1	X	53,954,083 - 54,062,605 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	X	53,226,407 - 53,338,824 (-)	NCBI		T2T-CHM13v2.0

Phf8
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	150,303,621 - 150,416,855 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	150,303,668 - 150,416,855 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	X	151,520,641 - 151,633,859 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	151,520,672 - 151,633,859 (+)	Ensembl			mm10	GRCm38
MGSCv37	X	147,955,215 - 148,068,400 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	X	146,861,897 - 146,966,549 (+)	NCBI		MGSCv36	mm8
Celera	X	132,791,679 - 132,892,823 (-)	NCBI		Celera
Cytogenetic Map	X	F3	NCBI
cM Map	X	68.46	NCBI

Phf8
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955475	1,105,619 - 1,230,756 (-)	Ensembl
ChiLan1.0	NW_004955475	1,105,619 - 1,230,758 (-)	NCBI	ChiLan1.0	ChiLan1.0

PHF8
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	55,327,026 - 55,435,822 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	55,330,624 - 55,443,589 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	46,144,815 - 46,250,594 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	54,250,970 - 54,355,278 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	54,250,970 - 54,355,913 (-)	Ensembl			panPan2	panpan1.1

PHF8
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	45,635,204 - 45,741,850 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	45,571,840 - 46,081,994 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	37,095,737 - 37,202,320 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	45,962,900 - 46,069,769 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	45,960,832 - 46,069,783 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	45,454,705 - 45,561,287 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	45,904,962 - 46,011,865 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	45,972,344 - 46,078,926 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Phf8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	38,510,905 - 38,595,607 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936751	850,237 - 934,586 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936751	850,630 - 935,382 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PHF8
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	46,648,168 - 46,759,239 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	X	46,648,164 - 46,761,192 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	52,130,299 - 52,307,327 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PHF8
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	50,058,687 - 50,172,827 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	50,058,273 - 50,172,086 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666086	4,010,981 - 4,117,007 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Phf8
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624909	1,481,710 - 1,639,840 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Phf8
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	X	12,621,543 - 12,683,751 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Phf8
487 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	539
Count of miRNA genes:	251
Interacting mature miRNAs:	300
Transcripts:	ENSRNOT00000045708
Prediction methods:	Microtar, Miranda
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
70165	Bp64	Blood pressure QTL 64	5.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	X	4001493	44939387	Rat
731181	Uae27	Urinary albumin excretion QTL 27	2.7	0.0059	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	X	1970440	46970440	Rat
631666	Iddm5	Insulin dependent diabetes mellitus QTL 5			blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	X	8111486	53111486	Rat
634325	Bw13	Body weight QTL 13	0		body mass (VT:0001259)	body weight (CMO:0000012)	X	4001493	24470521	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001108253	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434155	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434156	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434157	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434159	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006256792	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006256795	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006256796	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008773119	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602072	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099807	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099808	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099810	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099813	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099814	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063280064	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063280065	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063280066	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063280067	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474063	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ228348	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000045708 ⟹ ENSRNOP00000040672

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	23,967,560 - 24,066,471 (+)	Ensembl
mRatBN7.2 Ensembl	X	20,524,558 - 20,623,410 (+)	Ensembl
Rnor_6.0 Ensembl	X	21,063,562 - 21,168,750 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000093422

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	23,967,556 - 24,066,470 (+)	Ensembl
mRatBN7.2 Ensembl	X	20,524,558 - 20,623,410 (+)	Ensembl
Rnor_6.0 Ensembl	X	21,063,651 - 21,160,680 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000093656

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	X	21,094,640 - 21,095,485 (+)	Ensembl

RefSeq Acc Id:

NM_001108253 ⟹ NP_001101723

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	23,967,578 - 24,066,424 (+)	NCBI
mRatBN7.2	X	20,524,558 - 20,623,410 (+)	NCBI
Rnor_6.0	X	21,063,545 - 21,168,701 (+)	NCBI
Rnor_5.0	X	22,281,640 - 22,387,057 (-)	NCBI
RGSC_v3.4	X	40,869,942 - 40,970,244 (+)	RGD
Celera	X	20,777,198 - 20,875,387 (+)	RGD

Sequence:

show sequence

GCAGAGCTGTGTTGCCCCGGAGCGAGCCTAGCCGCTGGCGAGTCTCTGGGGCTGAGCTCTGCGC
CCTGAGGAGTTCCCCCTGCAGCCTCGGGCATGAAGAGATCTTTGTAGCGTTTGGGACCGTGGAC
GTTTTTATCAGCCATCGTCTAGGGAAGGCGGCTTGCTTGTTGCTGCCTTTCTGACCCTGTAAAG
CTTCAAAACTGGCACGGCGCAAAACGATCCAACCCCCTGTGAAGATGGCCTCGGTGCCTGTGTA
TTGCCTCTGTCGACTGCCTTACGATGTGACCCGCTTCATGATCGAGTGTGACATGTGCCAGGAC
TGGTTTCACGGCAGTTGTGTTGGTGTTGAGGAGGAGAAGGCTGCTGATATTGATCTGTACCATT
GCCCCAACTGTGAAGTCTTACACGGACCCTCCATTATGAAAAAACGTCGTGGATCTTCCAAAGG
ACATGATAATCACAAGGGTAAACCATTGAAGACTGGGAGCTCCATGTTTATCCGAGAACTACGG
GGTAGGACTTTTGACAGCTCAGACGAAGTGATTCTGAAACCCACTGGAAGTCAGCTGACAGTGG
AATTCTTGGAAGAGAATAGCTTCAGCGTGCCTATCCTTGTCTTGAAGAAGGATGGCTTGGGGAT
GACATTACCCTCTCCATCATTCACTGTGAGGGATGTGGAGCACTATGTTGGTTCTGACAAAGAG
ATTGATGTGATTGATGTGGCCCGCCAGGCTGACTGCAAAATGAAACTTGGTGATTTTGTCAAAT
ACTATTACAGTGGGAAGAGGGAAAAAGTCCTCAATGTCATTAGTTTGGAATTCTCTGATACCAG
ACTTTCAAACCTTGTGGAAACACCCAAGATTGTTCGAAAGCTGTCGTGGGTGGAGAACTTGTGG
CCGGAGGAATGTGTCTTTGAGAGGCCCAATGTGCAGAAGTACTGCCTCATGAGTGTGCGGGATA
GCTATACAGATTTTCACATTGACTTTGGTGGGACCTCAGTTTGGTACCATGTGCTTAAGGGTGA
GAAGATCTTCTACCTGATCCGCCCAACAAATGCTAATCTGACTCTCTTTGAGTGCTGGAGCAGC
TCCTCTAATCAGAATGAGATGTTCTTTGGTGACCAGGTGGAAAAATGCTACAAGTGTTCTGTGA
AGCAAGGACAAACACTGTTTATTCCTACAGGGTGGATACATGCTGTGCTAACACCAGTGGACTG
CTTAGCCTTTGGAGGGAACTTTTTACATAGCCTTAACATTGAAATGCAACTCAAGGCCTATGAA
ATTGAGAAGCGGCTGAGCACAGCAGACCTTTTCAAGTTTCCCAACTTCGAGACCATCTGTTGGT
ATGTGGGAAAACATATTCTGGACATCTTCCGAGGCTTACGAGAGAACAGGAGACATCCTGCCTC
CTACCTGGTCCATGGTGGTAAAGCTCTGAACTTGGCCTTTAGAGCCTGGACAAGGAAAGAAGCT
CTGCCAGACCATGAGGATGAGATCCCAGAGACAGTGCGGACTGTACAGCTCATTAAAGATCTGG
CTAGGGAGATCCGCCTGGTCGAAGACATCTTCCAACAGAACGTTGGGAAGACGAGCAATATCTT
TGGGCTGCAGAGGATCTTCCCAGCTGGTTCCATCCCCTTAACCAGGCCAGCCCATTCCACTTCA
GTATCCATGTCCAAGCTGTCACTGCCCTCCAAAAATGGTTCAAAGAAGAAAGGCCTGAAGCCCA
AGGATATCTTCAAGAAGGCAGAACGAAAGGGCAAGCAGAGTTCAGCCTTGGGGCCTGCTGGCCA
GTTGAGCTATAATCTCATGGACCCATACAGTCATCAGGCACTGAAGACAGGCCCTTCCCAGAAA
GCAAAGCTCAACATTGGTGGTGCCTGCTTGAATGACTCAGATGATGACTCAGCAGACATGGACG
TTGATGGCAGTGAGAACCCCCTGGCCCTGTTGATGGCTAATGGCAGTACAAAGAGGATGAAGAG
TGTATCCAAGTCTCGAAGAGCCAAAATTGCGAAGAAGGTAGACAGTGCAAGACTGGTAGCAGAA
CAGGTCATGGGGGATGAATTTGACTTGGACTCAGATGATGAGCTGCAGATTGATGAGAGACTGG
GAAAGGAAAAAGCGAACCTGTTAATGAGATCAAAATTTCCCCGGAAATTGCCCCGTGCAAAACC
TTGCTCTGACCCCAACCGAATTCGTGAACCTGGAGAAGTTGAGTTTGACATTGAGGAGGACTAT
ACAACAGATGAGGACATGGTGGAAGGGGTTGAAAGCAAGCTTGGTAATGGGAGTGGAGCTGGTG
GAATTCTTGATCTACTTAAGGCCAGCAGGCAGGTCGGGGGACCTGACTATGCTGCCCTCACTGA
GGCCCCAGCCTCCCCCAGCACACAAGAGGCCATCCAGGGCATGTTATGTATGGCCAACCTGCAG
TCCTCATCATCCTCACCAGCTACCTCCAGTCTGCAGGCTTGGTGGACCGGAGGGCAAGACCGAA
GCAGTGGGAGCTCCAGCAGTGGGCTGGGCACTGTGTCTAATAGTCCTATTTCCCAGCGCACCCC
AGGGAAGCGGCCCATCAAGAGGCCAGCATACTGGAAAAACGAGAGTGAGGAGGAAGAGAATGCC
AGTATGGATGAACAAGACAGCTTGGGAGCATGCTTCAAGGATGCTGAGTATATCTATCCATCCC
TGGAGTCTGATGATGATGACCCTGCTTTGAAATCTCGACCCAAGAAAAAGAAGAATTCAGATGA
TGCTCCATGGAGTCCTAAAGCCCGTGTGACTCCAACTCTACCCAAGCAGGACCGTCCTGTTCGT
GAAGGAACCAGAGTTGCCTCCATTGAGACAGGCTTGGCTGCAGCAGCTGCAAAGCTTGCCCAGC
AGGAGCTGCAAAAGGCCCAAAAGAAGAAATATATCAAGAAGAAGCCTTTGCTGAAGGAGGTAGA
ACAGCCTCGCCCTCAAGATTCCAATACCACCATGACAATGCCTGCACCAACACTGGCTACTACA
CCCCAGCCTGTCACCTCCTCCTCACCCCAGCCACCTCCTGAGCCTAAACAAGAGGCTCTGTCAG
GAAGTCTTGCTGACCATGAGTACACTGCTCGTCCCAATGCCTTTGGCATGGCTCAGGCAAATCG
CAGCACCACACCTATGGCCCCTGGAGTCTTCCTCACCCAGCGGCGCCCTTCAGTTGGTTCCCAG
AGCAGTCAGGCAGGACAAGGAAAGCGTCCGAAAAAGGGCCTGGCCACAGCAAAGCAAAGACTCG
GCCGCATCCTGAAAATCCACAGAAATGGCAAGTTACTTCTGTGAGACAAGCCCCGTCATGTCCT
ACTCCTTCATCCCTTCACCCCCATTGCCTTCTTCGTTGTCAACTCGGGGCACTCCTGGATCCTA
TGAGCCCCGGACAAGGTGCATTGTCCTGCTTTCTTGGGACTGACCAAAGGCACGGACTATCCCC
AACTCCCTTTCCCACTTCCCCTATGAGTATCCTACCTTCTCTTTCCATACCCATAAGTAGCAGG
TAAATGGGAGAAGTTTCCAACTGACAAGAACTTTTCCTGTTCCACCCACATATTTCACTTACAC
CTTGTCTTTGTACTTTTCCACCACTCCTCCATATGGAAGGAATGATGAGGAGCAGCATAAAGGG
AGTCTGGGCCCTTCAGTTTCCTCAGCCATGGATTGAGAGGCCCAGTGCTCAACATTTTCGGCAC
ATTTAGCCCTGTCTCTAAGCCTGCCCACCTCCACCCATTCCTACCCCTTCCTCACAACCAGTGG
ATATACCCTACCTTCAGTCTTGTTCCTTATAGAAGGTTGTGGTCTTTATCTCCTTTTACCTCTT
TTCATAACAAAAATGAAAAGGGTCTTTATGACCCTTACAGGCCATCTCCAGAGCTGGCCTAGAA
AAGCTGACTGTCTTTTGGGGTTGGGGGGCTTTTTGAGGTGGAAGAAGAAACAGATACCCAAGCC
TTTGACCATGGTTGTTGGCCTAGCCTACCAGAGGAAACTACTTTTGTCTGACTGCACATGAAGC
CCCTATGATGATCTTCAGGAATTTGCCTGTATTTTTGAGGCCCTGTAGAACATTATCCCCTTAG
CTATAACTGGGTTCCAGCAGGTACAAACTCACCTCCTAGAAATCTGAAGTACCAGCCACACTGA
TAACTCTGGCTCTGGCCTGCTCCTACCACCCCAACTGTACCACAAAGCACAGCCTGGACCTTCT
GAAGAGGGTGTGGTGAAACAACCTAACCCTGCAGGTCATTATCAGGAACTTCCATGTTTCTTTT
CCCATCTGAGCTTAGTCTAAAGAAGATTTCAGGACTAAGATCTTCACCGCTGGGACTTTTCACT
TTCAGACCACAGGCCAACAGTCAAGCATAGTGCAGATAGGCTATTCAAGTCTGAAGTTAGAAAC
GATGCCCATCTGTGAAGTAGCAGATATTCGGATCCACTTTTCTCTCCTTTGTGATTGTCACTAT
TTTCTAGAGAGTGTCCCCCACCTCCCTCTTGTCTTGCCTTACTGGCAATTTGGACTTGATGGAG
ACTGCCCCTTCTGAACAACCCGTTTTGGCACTGCCCAAGTGGGAGTGTCCTCTACCTTCCACTC
GTCCTCATCCCAGCTTGCCTAGGGCTTCTGGGGAATTTAACAGCTATGATGCAGACCACAGGGA
ATTTGTGAGGCCTCTGTGTTATCTTTTATGTTTGTGGCTTATCTTTCTTTTTTCTATAGATATA
TCTATACCCTCCATCCTTGTTGGAATGGGGGAGGGTACTTTAGAATATTTGCTTTTTCTACCTT
GGGGACCCCCAGGGGCCAAGCAGTCCTCCTTTAGTCACACCAAAGGCAAAAGGCCTGGCTACCT
CCCCTTTAGCACGTGAGGTCCCTACTCCCCTCCTTTCTACTCAGCTTTGCTCATCTTGGAGATT
TCAGGGCAGCAGTGGGGAAGTAAGGGGAAAGCAGGGGAAGCTTCTGACCCTGTATGGGCAACTT
CCTGACTAAAGGCTGACTGTTGTCACCAAAAACAGGTCCCTAGCCCTTACACCTATTAAAACTC
CCTCTTGATCTTTCAAAGGCAGCTAATTGCTAGCACCCTCTCCCTACCCATTCCAGGCCTCTTT
TCCCTCTGTTTCTTTGTTAGAAGGTTCTGTGGAGCTGAAACCCACCCTCTAATGGGGTTTGTTT
AGTTTAGTTGGGTTCTCAGAGTCTCCTGTTATTTTGTGTTGTTTCCAATGAAAAGCAAGTTTAC
CCTCAAAGTTATGCTTTTCCAAAGAAGCTAGTGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGCT
GTTGTTGTTGTTTTGTTTGTTTTGTTTTTATGTTTCAGGTTCTAAGTGAAGTGAGGTGGAGAGG
AGTTGGGAATAACCAAGGTTTAGACATGGTGAGATAGTTACCTCTGATCTGCAAACCCCAGCAG
AGAGCTGGGGTAGGATAAGAGGGCAGAGAGGATTTCTATTCACCTTTAATATATTTTTACAAAA
AAGCAAACAATTTAAAAACAAACCCACCGCTTCTGTACATGTCTAAATATATTTTTAGAAGTGG
GTAGGATTGTGATTTCTGATGCAGGGCCTTTTTATAAATAGGTTAGAGTAGCCTCATCCAGATT
TCTCTGTTGTTTGTTCCCCTTGTTTTTTCTTATGTTGTGTTACTAATGTAATTTATATAT

hide sequence

RefSeq Acc Id:

XM_006256792 ⟹ XP_006256854

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	23,967,127 - 24,066,473 (+)	NCBI
mRatBN7.2	X	20,524,502 - 20,623,459 (+)	NCBI
Rnor_6.0	X	21,063,487 - 21,168,750 (+)	NCBI
Rnor_5.0	X	22,281,640 - 22,387,057 (-)	NCBI

Sequence:

show sequence

CCCAGAATTCACCGCGCGCCGCCTCGGGCCGGAACTGCCCGAATAGCCTCTGCTTAGCGCAGAG
CTGTGTTGCCCCGGAGCGAGCCTAGCCGCTGGCGAGTCTCTGGGGCTGAGCTCTGCGCCCTGAG
GAGTTCCCCCTGCAGCCTCGGGCATGAAGAGATCTTTGTAGCGTTTGGGACCGTGGACGTTTTT
ATCAGGTTTGGGGCGTAAAAAGGTTCCTGTCAGTGGGGGAGGCGTAAAGAGATCCTCGTAAGTT
TTGGGGGCTACGAGCAAGATAGATTCTTATTTCAGACGAGACGTCTGTCAGGTGTGGGGAACAG
CAGAACCCTCGGCAGTCTGAGGGGATTGCAAAGCAATGCCTGCCATTTGGAGGTGTGGAAGGAA
AAAAAATCTTCGCTTAGTTTCGCGGGTGTGAGGAAATTCTAGTCAGTTTACTGGGGCTTCGAAG
AGATCCTTTTTAGTGTCAGGGGTGAGATGAGCACCCTGTCAGCTTTGGAGTGGAGGACGAAATT
GCGGTTTATTTCATTTTGGAGCATAATGAGACTCCTTACTGCTCAGGAAGGAATGATACTGAGA
ATGACGAAAAGGATAATTTAAACTCTCCGAACGCAATCCCAGAACTGTGATTTGAGTTGGGTGC
TTAGTCTTGTTTTCTTGTTCCTGAAGGCTTTGGGGGGGGGGGGTGAGGCAATTCGGAATAACCT
GCGGAGACTTAGAGGGATTTCCGCATCTCTGCCTCTTCCTATTTTGGGGGGCTAGAGAGGGTCT
CTGGTCTCTTCCTCAGCTTCCCTCTTCCCAGCCTCATCTTTTATGCCGCGGTTTGCGTCATAAT
AAAGGGAGCTGAGTCCTGGGAAGCAAGAGAGCAGTGAAGAGAGGGGTTCAGTGAGGGATTAAAG
AAGCTTCCCGAAGGCTTTCAAGATATTTACATGAAACCCGGAAAGAAGTTGTCACTGACTTCAG
GGCCAAAGAAGCCATCGTCTAGGGAAGGCGGCTTGCTTGTTGCTGCCTTTCTGACCCTGTAAAG
CTTCAAAACTGGCACGGCGCAAAACGATCCAACCCCCTGTGAAGATGGCCTCGGTGCCTGTGTA
TTGCCTCTGTCGACTGCCTTACGATGTGACCCGCTTCATGATCGAGTGTGACATGTGCCAGGAC
TGGTTTCACGGCAGTTGTGTTGGTGTTGAGGAGGAGAAGGCTGCTGATATTGATCTGTACCATT
GCCCCAACTGTGAAGTCTTACACGGACCCTCCATTATGAAAAAACGTCGTGGATCTTCCAAAGG
ACATGATAATCACAAGGGTAAACCATTGAAGACTGGGAGCTCCATGTTTATCCGAGAACTACGG
GGTAGGACTTTTGACAGCTCAGACGAAGTGATTCTGAAACCCACTGGAAGTCAGCTGACAGTGG
AATTCTTGGAAGAGAATAGCTTCAGCGTGCCTATCCTTGTCTTGAAGAAGGATGGCTTGGGGAT
GACATTACCCTCTCCATCATTCACTGTGAGGGATGTGGAGCACTATGTTGGTTCTGACAAAGAG
ATTGATGTGATTGATGTGGCCCGCCAGGCTGACTGCAAAATGAAACTTGGTGATTTTGTCAAAT
ACTATTACAGTGGGAAGAGGGAAAAAGTCCTCAATGTCATTAGTTTGGAATTCTCTGATACCAG
ACTTTCAAACCTTGTGGAAACACCCAAGATTGTTCGAAAGCTGTCGTGGGTGGAGAACTTGTGG
CCGGAGGAATGTGTCTTTGAGAGGCCCAATGTGCAGAAGTACTGCCTCATGAGTGTGCGGGATA
GCTATACAGATTTTCACATTGACTTTGGTGGGACCTCAGTTTGGTACCATGTGCTTAAGGGTGA
GAAGATCTTCTACCTGATCCGCCCAACAAATGCTAATCTGACTCTCTTTGAGTGCTGGAGCAGC
TCCTCTAATCAGAATGAGATGTTCTTTGGTGACCAGGTGGAAAAATGCTACAAGTGTTCTGTGA
AGCAAGGACAAACACTGTTTATTCCTACAGGGTGGATACATGCTGTGCTAACACCAGTGGACTG
CTTAGCCTTTGGAGGGAACTTTTTACATAGCCTTAACATTGAAATGCAACTCAAGGCCTATGAA
ATTGAGAAGCGGCTGAGCACAGCAGACCTTTTCAAGTTTCCCAACTTCGAGACCATCTGTTGGT
ATGTGGGAAAACATATTCTGGACATCTTCCGAGGCTTACGAGAGAACAGGAGACATCCTGCCTC
CTACCTGGTCCATGGTGGTAAAGCTCTGAACTTGGCCTTTAGAGCCTGGACAAGGAAAGAAGCT
CTGCCAGACCATGAGGATGAGATCCCAGAGACAGTGCGGACTGTACAGCTCATTAAAGATCTGG
CTAGGGAGATCCGCCTGGTCGAAGACATCTTCCAACAGAACGTTGGGAAGACGAGCAATATCTT
TGGGCTGCAGAGGATCTTCCCAGCTGGTTCCATCCCCTTAACCAGGCCAGCCCATTCCACTTCA
GTATCCATGTCCAAGCTGTCACTGCCCTCCAAAAATGGTTCAAAGAAGAAAGGCCTGAAGCCCA
AGGATATCTTCAAGAAGGCAGAACGAAAGGGCAAGCAGAGTTCAGCCTTGGGGCCTGCTGGCCA
GTTGAGCTATAATCTCATGGACCCATACAGTCATCAGGCACTGAAGACAGGCCCTTCCCAGAAA
GCAAAGCTCAACATTGGTGGTGCCTGCTTGAATGACTCAGATGATGACTCAGCAGACATGGACG
TTGATGGCAGTGAGAACCCCCTGGCCCTGTTGATGGCTAATGGCAGTACAAAGAGGATGAAGAG
TGTATCCAAGTCTCGAAGAGCCAAAATTGCGAAGAAGGTAGACAGTGCAAGACTGGTAGCAGAA
CAGGTCATGGGGGATGAATTTGACTTGGACTCAGATGATGAGCTGCAGATTGATGAGAGACTGG
GAAAGGAAAAAGCGAACCTGTTAATGAGATCAAAATTTCCCCGGAAATTGCCCCGTGCAAAACC
TTGCTCTGACCCCAACCGAATTCGTGAACCTGGAGAAGTTGAGTTTGACATTGAGGAGGACTAT
ACAACAGATGAGGACATGGTGGAAGGGGTTGAAAGCAAGCTTGGTAATGGGAGTGGAGCTGGTG
GAATTCTTGATCTACTTAAGGCCAGCAGGCAGGTCGGGGGACCTGACTATGCTGCCCTCACTGA
GGCCCCAGCCTCCCCCAGCACACAAGAGGCCATCCAGGGCATGTTATGTATGGCCAACCTGCAG
TCCTCATCATCCTCACCAGCTACCTCCAGTCTGCAGGCTTGGTGGACCGGAGGGCAAGACCGAA
GCAGTGGGAGCTCCAGCAGTGGGCTGGGCACTGTGTCTAATAGTCCTATTTCCCAGCGCACCCC
AGGGAAGCGGCCCATCAAGAGGCCAGCATACTGGAAAAACGAGAGTGAGGAGGAAGAGAATGCC
AGTATGGATGAACAAGACAGCTTGGGAGCATGCTTCAAGGATGCTGAGTATATCTATCCATCCC
TGGAGTCTGATGATGATGACCCTGCTTTGAAATCTCGACCCAAGAAAAAGAAGAATTCAGATGA
TGCTCCATGGAGTCCTAAAGCCCGTGTGACTCCAACTCTACCCAAGCAGGACCGTCCTGTTCGT
GAAGGAACCAGAGTTGCCTCCATTGAGACAGGCTTGGCTGCAGCAGCTGCAAAGCTTGCCCAGC
AGGAGCTGCAAAAGGCCCAAAAGAAGAAATATATCAAGAAGAAGCCTTTGCTGAAGGAGGTAGA
ACAGCCTCGCCCTCAAGATTCCAATACCACCATGACAATGCCTGCACCAACACTGGCTACTACA
CCCCAGCCTGTCACCTCCTCCTCACCCCAGCCACCTCCTGAGCCTAAACAAGAGGCTCTGTCAG
GAAGTCTTGCTGACCATGAGTACACTGCTCGTCCCAATGCCTTTGGCATGGCTCAGGCAAATCG
CAGCACCACACCTATGGCCCCTGGAGTCTTCCTCACCCAGCGGCGCCCTTCAGTTGGTTCCCAG
AGCAGTCAGGCAGGACAAGGAAAGCGTCCGAAAAAGGGCCTGGCCACAGCAAAGCAAAGACTCG
GCCGCATCCTGAAAATCCACAGAAATGGCAAGTTACTTCTGTGAGACAAGCCCCGTCATGTCCT
ACTCCTTCATCCCTTCACCCCCATTGCCTTCTTCGTTGTCAACTCGGGGCACTCCTGGATCCTA
TGAGCCCCGGACAAGGTGCATTGTCCTGCTTTCTTGGGACTGACCAAAGGCACGGACTATCCCC
AACTCCCTTTCCCACTTCCCCTATGAGTATCCTACCTTCTCTTTCCATACCCATAAGTAGCAGG
TAAATGGGAGAAGTTTCCAACTGACAAGAACTTTTCCTGTTCCACCCACATATTTCACTTACAC
CTTGTCTTTGTACTTTTCCACCACTCCTCCATATGGAAGGAATGATGAGGAGCAGCATAAAGGG
AGTCTGGGCCCTTCAGTTTCCTCAGCCATGGATTGAGAGGCCCAGTGCTCAACATTTTCGGCAC
ATTTAGCCCTGTCTCTAAGCCTGCCCACCTCCACCCATTCCTACCCCTTCCTCACAACCAGTGG
ATATACCCTACCTTCAGTCTTGTTCCTTATAGAAGGTTGTGGTCTTTATCTCCTTTTACCTCTT
TTCATAACAAAAATGAAAAGGGTCTTTATGACCCTTACAGGCCATCTCCAGAGCTGGCCTAGAA
AAGCTGACTGTCTTTTGGGGTTGGGGGGCTTTTTGAGGTGGAAGAAGAAACAGATACCCAAGCC
TTTGACCATGGTTGTTGGCCTAGCCTACCAGAGGAAACTACTTTTGTCTGACTGCACATGAAGC
CCCTATGATGATCTTCAGGAATTTGCCTGTATTTTTGAGGCCCTGTAGAACATTATCCCCTTAG
CTATAACTGGGTTCCAGCAGGTACAAACTCACCTCCTAGAAATCTGAAGTACCAGCCACACTGA
TAACTCTGGCTCTGGCCTGCTCCTACCACCCCAACTGTACCACAAAGCACAGCCTGGACCTTCT
GAAGAGGGTGTGGTGAAACAACCTAACCCTGCAGGTCATTATCAGGAACTTCCATGTTTCTTTT
CCCATCTGAGCTTAGTCTAAAGAAGATTTCAGGACTAAGATCTTCACCGCTGGGACTTTTCACT
TTCAGACCACAGGCCAACAGTCAAGCATAGTGCAGATAGGCTATTCAAGTCTGAAGTTAGAAAC
GATGCCCATCTGTGAAGTAGCAGATATTCGGATCCACTTTTCTCTCCTTTGTGATTGTCACTAT
TTTCTAGAGAGTGTCCCCCACCTCCCTCTTGTCTTGCCTTACTGGCAATTTGGACTTGATGGAG
ACTGCCCCTTCTGAACAACCCGTTTTGGCACTGCCCAAGTGGGAGTGTCCTCTACCTTCCACTC
GTCCTCATCCCAGCTTGCCTAGGGCTTCTGGGGAATTTAACAGCTATGATGCAGACCACAGGGA
ATTTGTGAGGCCTCTGTGTTATCTTTTATGTTTGTGGCTTATCTTTCTTTTTTCTATAGATATA
TCTATACCCTCCATCCTTGTTGGAATGGGGGAGGGTACTTTAGAATATTTGCTTTTTCTACCTT
GGGGACCCCCAGGGGCCAAGCAGTCCTCCTTTAGTCACACCAAAGGCAAAAGGCCTGGCTACCT
CCCCTTTAGCACGTGAGGTCCCTACTCCCCTCCTTTCTACTCAGCTTTGCTCATCTTGGAGATT
TCAGGGCAGCAGTGGGGAAGTAAGGGGAAAGCAGGGGAAGCTTCTGACCCTGTATGGGCAACTT
CCTGACTAAAGGCTGACTGTTGTCACCAAAAACAGGTCCCTAGCCCTTACACCTATTAAAACTC
CCTCTTGATCTTTCAAAGGCAGCTAATTGCTAGCACCCTCTCCCTACCCATTCCAGGCCTCTTT
TCCCTCTGTTTCTTTGTTAGAAGGTTCTGTGGAGCTGAAACCCACCCTCTAATGGGGTTTGTTT
AGTTTAGTTGGGTTCTCAGAGTCTCCTGTTATTTTGTGTTGTTTCCAATGAAAAGCAAGTTTAC
CCTCAAAGTTATGCTTTTCCAAAGAAGCTAGTGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGCT
GTTGTTGTTGTTTTGTTTGTTTTGTTTTTATGTTTCAGGTTCTAAGTGAAGTGAGGTGGAGAGG
AGTTGGGAATAACCAAGGTTTAGACATGGTGAGATAGTTACCTCTGATCTGCAAACCCCAGCAG
AGAGCTGGGGTAGGATAAGAGGGCAGAGAGGATTTCTATTCACCTTTAATATATTTTTACAAAA
AAGCAAACAATTTAAAAACAAACCCACCGCTTCTGTACATGTCTAAATATATTTTTAGAAGTGG
GTAGGATTGTGATTTCTGATGCAGGGCCTTTTTATAAATAGGTTAGAGTAGCCTCATCCAGATT
TCTCTGTTGTTTGTTCCCCTTGTTTTTTCTTATGTTGTGTTACTAATGTAATTTATATATTTTT
TAGATCTCCCTTTCCTGTAGAGATAAAAGTGATTTATCTTGGCAA

hide sequence

RefSeq Acc Id:

XM_008773119 ⟹ XP_008771341

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	23,968,497 - 24,066,473 (+)	NCBI
mRatBN7.2	X	20,525,477 - 20,623,459 (+)	NCBI
Rnor_6.0	X	21,064,527 - 21,168,750 (+)	NCBI

Sequence:

show sequence

TGAAAGAATCTGCGGGTGGGTGGGACCTCTGTCTCCACTTAACTCCGCACTCTCGACCGCCTGT
GTTGTAGTCCTGGCTTTGGTGTTACCCTCTTTTTCAGAACTGGAGCCATCGTCTAGGGAAGGCG
GCTTGCTTGTTGCTGCCTTTCTGACCCTGTAAAGCTTCAAAACTGGCACGGCGCAAAACGATCC
AACCCCCTGTGAAGATGGCCTCGGTGCCTGTGTATTGCCTCTGTCGACTGCCTTACGATGTGAC
CCGCTTCATGATCGAGTGTGACATGTGCCAGGACTGGTTTCACGGCAGTTGTGTTGGTGTTGAG
GAGGAGAAGGCTGCTGATATTGATCTGTACCATTGCCCCAACTGTGAAGTCTTACACGGACCCT
CCATTATGAAAAAACGTCGTGGATCTTCCAAAGGACATGATAATCACAAGGGTAAACCATTGAA
GACTGGGAGCTCCATGTTTATCCGAGAACTACGGGGTAGGACTTTTGACAGCTCAGACGAAGTG
ATTCTGAAACCCACTGGAAGTCAGCTGACAGTGGAATTCTTGGAAGAGAATAGCTTCAGCGTGC
CTATCCTTGTCTTGAAGAAGGATGGCTTGGGGATGACATTACCCTCTCCATCATTCACTGTGAG
GGATGTGGAGCACTATGTTGGTTCTGACAAAGAGATTGATGTGATTGATGTGGCCCGCCAGGCT
GACTGCAAAATGAAACTTGGTGATTTTGTCAAATACTATTACAGTGGGAAGAGGGAAAAAGTCC
TCAATGTCATTAGTTTGGAATTCTCTGATACCAGACTTTCAAACCTTGTGGAAACACCCAAGAT
TGTTCGAAAGCTGTCGTGGGTGGAGAACTTGTGGCCGGAGGAATGTGTCTTTGAGAGGCCCAAT
GTGCAGAAGTACTGCCTCATGAGTGTGCGGGATAGCTATACAGATTTTCACATTGACTTTGGTG
GGACCTCAGTTTGGTACCATGTGCTTAAGGGTGAGAAGATCTTCTACCTGATCCGCCCAACAAA
TGCTAATCTGACTCTCTTTGAGTGCTGGAGCAGCTCCTCTAATCAGAATGAGATGTTCTTTGGT
GACCAGGTGGAAAAATGCTACAAGTGTTCTGTGAAGCAAGGACAAACACTGTTTATTCCTACAG
GGTGGATACATGCTGTGCTAACACCAGTGGACTGCTTAGCCTTTGGAGGGAACTTTTTACATAG
CCTTAACATTGAAATGCAACTCAAGGCCTATGAAATTGAGAAGCGGCTGAGCACAGCAGACCTT
TTCAAGTTTCCCAACTTCGAGACCATCTGTTGGTATGTGGGAAAACATATTCTGGACATCTTCC
GAGGCTTACGAGAGAACAGGAGACATCCTGCCTCCTACCTGGTCCATGGTGGTAAAGCTCTGAA
CTTGGCCTTTAGAGCCTGGACAAGGAAAGAAGCTCTGCCAGACCATGAGGATGAGATCCCAGAG
ACAGTGCGGACTGTACAGCTCATTAAAGATCTGGCTAGGGAGATCCGCCTGGTCGAAGACATCT
TCCAACAGAACGTTGGGAAGACGAGCAATATCTTTGGGCTGCAGAGGATCTTCCCAGCTGGTTC
CATCCCCTTAACCAGGCCAGCCCATTCCACTTCAGTATCCATGTCCAAGCTGTCACTGCCCTCC
AAAAATGGTTCAAAGAAGAAAGGCCTGAAGCCCAAGGATATCTTCAAGAAGGCAGAACGAAAGG
GCAAGCAGAGTTCAGCCTTGGGGCCTGCTGGCCAGTTGAGCTATAATCTCATGGACCCATACAG
TCATCAGGCACTGAAGACAGGCCCTTCCCAGAAAGCAAAGCTCAACATTGGTGGTGCCTGCTTG
AATGACTCAGATGATGACTCAGCAGACATGGACGTTGATGGCAGTGAGAACCCCCTGGCCCTGT
TGATGGCTAATGGCAGTACAAAGAGGATGAAGAGTGTATCCAAGTCTCGAAGAGCCAAAATTGC
GAAGAAGGTAGACAGTGCAAGACTGGTAGCAGAACAGGTCATGGGGGATGAATTTGACTTGGAC
TCAGATGATGAGCTGCAGATTGATGAGAGACTGGGAAAGGAAAAAGCGAACCTGTTAATGAGAT
CAAAATTTCCCCGGAAATTGCCCCGTGCAAAACCTTGCTCTGACCCCAACCGAATTCGTGAACC
TGGAGAAGTTGAGTTTGACATTGAGGAGGACTATACAACAGATGAGGACATGGTGGAAGGGGTT
GAAAGCAAGCTTGGTAATGGGAGTGGAGCTGGTGGAATTCTTGATCTACTTAAGGCCAGCAGGC
AGGTCGGGGGACCTGACTATGCTGCCCTCACTGAGGCCCCAGCCTCCCCCAGCACACAAGAGGC
CATCCAGGGCATGTTATGTATGGCCAACCTGCAGTCCTCATCATCCTCACCAGCTACCTCCAGT
CTGCAGGCTTGGTGGACCGGAGGGCAAGACCGAAGCAGTGGGAGCTCCAGCAGTGGGCTGGGCA
CTGTGTCTAATAGTCCTATTTCCCAGCGCACCCCAGGGAAGCGGCCCATCAAGAGGCCAGCATA
CTGGAAAAACGAGAGTGAGGAGGAAGAGAATGCCAGTATGGATGAACAAGACAGCTTGGGAGCA
TGCTTCAAGGATGCTGAGTATATCTATCCATCCCTGGAGTCTGATGATGATGACCCTGCTTTGA
AATCTCGACCCAAGAAAAAGAAGAATTCAGATGATGCTCCATGGAGTCCTAAAGCCCGTGTGAC
TCCAACTCTACCCAAGCAGGACCGTCCTGTTCGTGAAGGAACCAGAGTTGCCTCCATTGAGACA
GGCTTGGCTGCAGCAGCTGCAAAGCTTGCCCAGCAGGAGCTGCAAAAGGCCCAAAAGAAGAAAT
ATATCAAGAAGAAGCCTTTGCTGAAGGAGGTAGAACAGCCTCGCCCTCAAGATTCCAATACCAC
CATGACAATGCCTGCACCAACACTGGCTACTACACCCCAGCCTGTCACCTCCTCCTCACCCCAG
CCACCTCCTGAGCCTAAACAAGAGGCTCTGTCAGGAAGTCTTGCTGACCATGAGTACACTGCTC
GTCCCAATGCCTTTGGCATGGCTCAGGCAAATCGCAGCACCACACCTATGGCCCCTGGAGTCTT
CCTCACCCAGCGGCGCCCTTCAGTTGGTTCCCAGAGCAGTCAGGCAGGACAAGGAAAGCGTCCG
AAAAAGGGCCTGGCCACAGCAAAGCAAAGACTCGGCCGCATCCTGAAAATCCACAGAAATGGCA
AGTTACTTCTGTGAGACAAGCCCCGTCATGTCCTACTCCTTCATCCCTTCACCCCCATTGCCTT
CTTCGTTGTCAACTCGGGGCACTCCTGGATCCTATGAGCCCCGGACAAGGTGCATTGTCCTGCT
TTCTTGGGACTGACCAAAGGCACGGACTATCCCCAACTCCCTTTCCCACTTCCCCTATGAGTAT
CCTACCTTCTCTTTCCATACCCATAAGTAGCAGGTAAATGGGAGAAGTTTCCAACTGACAAGAA
CTTTTCCTGTTCCACCCACATATTTCACTTACACCTTGTCTTTGTACTTTTCCACCACTCCTCC
ATATGGAAGGAATGATGAGGAGCAGCATAAAGGGAGTCTGGGCCCTTCAGTTTCCTCAGCCATG
GATTGAGAGGCCCAGTGCTCAACATTTTCGGCACATTTAGCCCTGTCTCTAAGCCTGCCCACCT
CCACCCATTCCTACCCCTTCCTCACAACCAGTGGATATACCCTACCTTCAGTCTTGTTCCTTAT
AGAAGGTTGTGGTCTTTATCTCCTTTTACCTCTTTTCATAACAAAAATGAAAAGGGTCTTTATG
ACCCTTACAGGCCATCTCCAGAGCTGGCCTAGAAAAGCTGACTGTCTTTTGGGGTTGGGGGGCT
TTTTGAGGTGGAAGAAGAAACAGATACCCAAGCCTTTGACCATGGTTGTTGGCCTAGCCTACCA
GAGGAAACTACTTTTGTCTGACTGCACATGAAGCCCCTATGATGATCTTCAGGAATTTGCCTGT
ATTTTTGAGGCCCTGTAGAACATTATCCCCTTAGCTATAACTGGGTTCCAGCAGGTACAAACTC
ACCTCCTAGAAATCTGAAGTACCAGCCACACTGATAACTCTGGCTCTGGCCTGCTCCTACCACC
CCAACTGTACCACAAAGCACAGCCTGGACCTTCTGAAGAGGGTGTGGTGAAACAACCTAACCCT
GCAGGTCATTATCAGGAACTTCCATGTTTCTTTTCCCATCTGAGCTTAGTCTAAAGAAGATTTC
AGGACTAAGATCTTCACCGCTGGGACTTTTCACTTTCAGACCACAGGCCAACAGTCAAGCATAG
TGCAGATAGGCTATTCAAGTCTGAAGTTAGAAACGATGCCCATCTGTGAAGTAGCAGATATTCG
GATCCACTTTTCTCTCCTTTGTGATTGTCACTATTTTCTAGAGAGTGTCCCCCACCTCCCTCTT
GTCTTGCCTTACTGGCAATTTGGACTTGATGGAGACTGCCCCTTCTGAACAACCCGTTTTGGCA
CTGCCCAAGTGGGAGTGTCCTCTACCTTCCACTCGTCCTCATCCCAGCTTGCCTAGGGCTTCTG
GGGAATTTAACAGCTATGATGCAGACCACAGGGAATTTGTGAGGCCTCTGTGTTATCTTTTATG
TTTGTGGCTTATCTTTCTTTTTTCTATAGATATATCTATACCCTCCATCCTTGTTGGAATGGGG
GAGGGTACTTTAGAATATTTGCTTTTTCTACCTTGGGGACCCCCAGGGGCCAAGCAGTCCTCCT
TTAGTCACACCAAAGGCAAAAGGCCTGGCTACCTCCCCTTTAGCACGTGAGGTCCCTACTCCCC
TCCTTTCTACTCAGCTTTGCTCATCTTGGAGATTTCAGGGCAGCAGTGGGGAAGTAAGGGGAAA
GCAGGGGAAGCTTCTGACCCTGTATGGGCAACTTCCTGACTAAAGGCTGACTGTTGTCACCAAA
AACAGGTCCCTAGCCCTTACACCTATTAAAACTCCCTCTTGATCTTTCAAAGGCAGCTAATTGC
TAGCACCCTCTCCCTACCCATTCCAGGCCTCTTTTCCCTCTGTTTCTTTGTTAGAAGGTTCTGT
GGAGCTGAAACCCACCCTCTAATGGGGTTTGTTTAGTTTAGTTGGGTTCTCAGAGTCTCCTGTT
ATTTTGTGTTGTTTCCAATGAAAAGCAAGTTTACCCTCAAAGTTATGCTTTTCCAAAGAAGCTA
GTGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGCTGTTGTTGTTGTTTTGTTTGTTTTGTTTTTA
TGTTTCAGGTTCTAAGTGAAGTGAGGTGGAGAGGAGTTGGGAATAACCAAGGTTTAGACATGGT
GAGATAGTTACCTCTGATCTGCAAACCCCAGCAGAGAGCTGGGGTAGGATAAGAGGGCAGAGAG
GATTTCTATTCACCTTTAATATATTTTTACAAAAAAGCAAACAATTTAAAAACAAACCCACCGC
TTCTGTACATGTCTAAATATATTTTTAGAAGTGGGTAGGATTGTGATTTCTGATGCAGGGCCTT
TTTATAAATAGGTTAGAGTAGCCTCATCCAGATTTCTCTGTTGTTTGTTCCCCTTGTTTTTTCT
TATGTTGTGTTACTAATGTAATTTATATATTTTTTAGATCTCCCTTTCCTGTAGAGATAAAAGT
GATTTATCTTGGCAA

hide sequence

RefSeq Acc Id:

XM_017602072 ⟹ XP_017457561

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	23,967,511 - 24,066,473 (+)	NCBI
mRatBN7.2	X	20,524,502 - 20,623,459 (+)	NCBI
Rnor_6.0	X	21,063,487 - 21,168,750 (+)	NCBI

Sequence:

show sequence

CCCAGAATTCACCGCGCGCCGCCTCGGGCCGGAACTGCCCGAATAGCCTCTGCTTAGCGCAGAG
CTGTGTTGCCCCGGAGCGAGCCTAGCCGCTGGCGAGTCTCTGGGGCTGAGCTCTGCGCCCTGAG
GAGTTCCCCCTGCAGCCTCGGGCATGAAGAGATCTTTGTAGCGTTTGGGACCGTGGACGTTTTT
ATCAGGTTTGGGGCGTAAAAAGGTTCCTGTCAGTGGGGGAGGCGTAAAGAGATCCTCCCATCGT
CTAGGGAAGGCGGCTTGCTTGTTGCTGCCTTTCTGACCCTGTAAAGCTTCAAAACTGGCACGGC
GCAAAACGATCCAACCCCCTGTGAAGATGGCCTCGGTGCCTGTGTATTGCCTCTGTCGACTGCC
TTACGATGTGACCCGCTTCATGATCGAGTGTGACATGTGCCAGGACTGGTTTCACGGCAGTTGT
GTTGGTGTTGAGGAGGAGAAGGCTGCTGATATTGATCTGTACCATTGCCCCAACTGTGAAGTCT
TACACGGACCCTCCATTATGAAAAAACGTCGTGGATCTTCCAAAGGACATGATAATCACAAGGG
TAAACCATTGAAGACTGGGAGCTCCATGTTTATCCGAGAACTACGGGGTAGGACTTTTGACAGC
TCAGACGAAGTGATTCTGAAACCCACTGGAAGTCAGCTGACAGTGGAATTCTTGGAAGAGAATA
GCTTCAGCGTGCCTATCCTTGTCTTGAAGAAGGATGGCTTGGGGATGACATTACCCTCTCCATC
ATTCACTGTGAGGGATGTGGAGCACTATGTTGGTTCTGACAAAGAGATTGATGTGATTGATGTG
GCCCGCCAGGCTGACTGCAAAATGAAACTTGGTGATTTTGTCAAATACTATTACAGTGGGAAGA
GGGAAAAAGTCCTCAATGTCATTAGTTTGGAATTCTCTGATACCAGACTTTCAAACCTTGTGGA
AACACCCAAGATTGTTCGAAAGCTGTCGTGGGTGGAGAACTTGTGGCCGGAGGAATGTGTCTTT
GAGAGGCCCAATGTGCAGAAGTACTGCCTCATGAGTGTGCGGGATAGCTATACAGATTTTCACA
TTGACTTTGGTGGGACCTCAGTTTGGTACCATGTGCTTAAGGGTGAGAAGATCTTCTACCTGAT
CCGCCCAACAAATGCTAATCTGACTCTCTTTGAGTGCTGGAGCAGCTCCTCTAATCAGAATGAG
ATGTTCTTTGGTGACCAGGTGGAAAAATGCTACAAGTGTTCTGTGAAGCAAGGACAAACACTGT
TTATTCCTACAGGGTGGATACATGCTGTGCTAACACCAGTGGACTGCTTAGCCTTTGGAGGGAA
CTTTTTACATAGCCTTAACATTGAAATGCAACTCAAGGCCTATGAAATTGAGAAGCGGCTGAGC
ACAGCAGACCTTTTCAAGTTTCCCAACTTCGAGACCATCTGTTGGTATGTGGGAAAACATATTC
TGGACATCTTCCGAGGCTTACGAGAGAACAGGAGACATCCTGCCTCCTACCTGGTCCATGGTGG
TAAAGCTCTGAACTTGGCCTTTAGAGCCTGGACAAGGAAAGAAGCTCTGCCAGACCATGAGGAT
GAGATCCCAGAGACAGTGCGGACTGTACAGCTCATTAAAGATCTGGCTAGGGAGATCCGCCTGG
TCGAAGACATCTTCCAACAGAACGTTGGGAAGACGAGCAATATCTTTGGGCTGCAGAGGATCTT
CCCAGCTGGTTCCATCCCCTTAACCAGGCCAGCCCATTCCACTTCAGTATCCATGTCCAAGCTG
TCACTGCCCTCCAAAAATGGTTCAAAGAAGAAAGGCCTGAAGCCCAAGGATATCTTCAAGAAGG
CAGAACGAAAGGGCAAGCAGAGTTCAGCCTTGGGGCCTGCTGGCCAGTTGAGCTATAATCTCAT
GGACCCATACAGTCATCAGGCACTGAAGACAGGCCCTTCCCAGAAAGCAAAGCTCAACATTGGT
GGTGCCTGCTTGAATGACTCAGATGATGACTCAGCAGACATGGACGTTGATGGCAGTGAGAACC
CCCTGGCCCTGTTGATGGCTAATGGCAGTACAAAGAGGATGAAGAGTGTATCCAAGTCTCGAAG
AGCCAAAATTGCGAAGAAGGTAGACAGTGCAAGACTGGTAGCAGAACAGGTCATGGGGGATGAA
TTTGACTTGGACTCAGATGATGAGCTGCAGATTGATGAGAGACTGGGAAAGGAAAAAGCGAACC
TGTTAATGAGATCAAAATTTCCCCGGAAATTGCCCCGTGCAAAACCTTGCTCTGACCCCAACCG
AATTCGTGAACCTGGAGAAGTTGAGTTTGACATTGAGGAGGACTATACAACAGATGAGGACATG
GTGGAAGGGGTTGAAAGCAAGCTTGGTAATGGGAGTGGAGCTGGTGGAATTCTTGATCTACTTA
AGGCCAGCAGGCAGGTCGGGGGACCTGACTATGCTGCCCTCACTGAGGCCCCAGCCTCCCCCAG
CACACAAGAGGCCATCCAGGGCATGTTATGTATGGCCAACCTGCAGTCCTCATCATCCTCACCA
GCTACCTCCAGTCTGCAGGCTTGGTGGACCGGAGGGCAAGACCGAAGCAGTGGGAGCTCCAGCA
GTGGGCTGGGCACTGTGTCTAATAGTCCTATTTCCCAGCGCACCCCAGGGAAGCGGCCCATCAA
GAGGCCAGCATACTGGAAAAACGAGAGTGAGGAGGAAGAGAATGCCAGTATGGATGAACAAGAC
AGCTTGGGAGCATGCTTCAAGGATGCTGAGTATATCTATCCATCCCTGGAGTCTGATGATGATG
ACCCTGCTTTGAAATCTCGACCCAAGAAAAAGAAGAATTCAGATGATGCTCCATGGAGTCCTAA
AGCCCGTGTGACTCCAACTCTACCCAAGCAGGACCGTCCTGTTCGTGAAGGAACCAGAGTTGCC
TCCATTGAGACAGGCTTGGCTGCAGCAGCTGCAAAGCTTGCCCAGCAGGAGCTGCAAAAGGCCC
AAAAGAAGAAATATATCAAGAAGAAGCCTTTGCTGAAGGAGGTAGAACAGCCTCGCCCTCAAGA
TTCCAATACCACCATGACAATGCCTGCACCAACACTGGCTACTACACCCCAGCCTGTCACCTCC
TCCTCACCCCAGCCACCTCCTGAGCCTAAACAAGAGGCTCTGTCAGGAAGTCTTGCTGACCATG
AGTACACTGCTCGTCCCAATGCCTTTGGCATGGCTCAGGCAAATCGCAGCACCACACCTATGGC
CCCTGGAGTCTTCCTCACCCAGCGGCGCCCTTCAGTTGGTTCCCAGAGCAGTCAGGCAGGACAA
GGAAAGCGTCCGAAAAAGGGCCTGGCCACAGCAAAGCAAAGACTCGGCCGCATCCTGAAAATCC
ACAGAAATGGCAAGTTACTTCTGTGAGACAAGCCCCGTCATGTCCTACTCCTTCATCCCTTCAC
CCCCATTGCCTTCTTCGTTGTCAACTCGGGGCACTCCTGGATCCTATGAGCCCCGGACAAGGTG
CATTGTCCTGCTTTCTTGGGACTGACCAAAGGCACGGACTATCCCCAACTCCCTTTCCCACTTC
CCCTATGAGTATCCTACCTTCTCTTTCCATACCCATAAGTAGCAGGTAAATGGGAGAAGTTTCC
AACTGACAAGAACTTTTCCTGTTCCACCCACATATTTCACTTACACCTTGTCTTTGTACTTTTC
CACCACTCCTCCATATGGAAGGAATGATGAGGAGCAGCATAAAGGGAGTCTGGGCCCTTCAGTT
TCCTCAGCCATGGATTGAGAGGCCCAGTGCTCAACATTTTCGGCACATTTAGCCCTGTCTCTAA
GCCTGCCCACCTCCACCCATTCCTACCCCTTCCTCACAACCAGTGGATATACCCTACCTTCAGT
CTTGTTCCTTATAGAAGGTTGTGGTCTTTATCTCCTTTTACCTCTTTTCATAACAAAAATGAAA
AGGGTCTTTATGACCCTTACAGGCCATCTCCAGAGCTGGCCTAGAAAAGCTGACTGTCTTTTGG
GGTTGGGGGGCTTTTTGAGGTGGAAGAAGAAACAGATACCCAAGCCTTTGACCATGGTTGTTGG
CCTAGCCTACCAGAGGAAACTACTTTTGTCTGACTGCACATGAAGCCCCTATGATGATCTTCAG
GAATTTGCCTGTATTTTTGAGGCCCTGTAGAACATTATCCCCTTAGCTATAACTGGGTTCCAGC
AGGTACAAACTCACCTCCTAGAAATCTGAAGTACCAGCCACACTGATAACTCTGGCTCTGGCCT
GCTCCTACCACCCCAACTGTACCACAAAGCACAGCCTGGACCTTCTGAAGAGGGTGTGGTGAAA
CAACCTAACCCTGCAGGTCATTATCAGGAACTTCCATGTTTCTTTTCCCATCTGAGCTTAGTCT
AAAGAAGATTTCAGGACTAAGATCTTCACCGCTGGGACTTTTCACTTTCAGACCACAGGCCAAC
AGTCAAGCATAGTGCAGATAGGCTATTCAAGTCTGAAGTTAGAAACGATGCCCATCTGTGAAGT
AGCAGATATTCGGATCCACTTTTCTCTCCTTTGTGATTGTCACTATTTTCTAGAGAGTGTCCCC
CACCTCCCTCTTGTCTTGCCTTACTGGCAATTTGGACTTGATGGAGACTGCCCCTTCTGAACAA
CCCGTTTTGGCACTGCCCAAGTGGGAGTGTCCTCTACCTTCCACTCGTCCTCATCCCAGCTTGC
CTAGGGCTTCTGGGGAATTTAACAGCTATGATGCAGACCACAGGGAATTTGTGAGGCCTCTGTG
TTATCTTTTATGTTTGTGGCTTATCTTTCTTTTTTCTATAGATATATCTATACCCTCCATCCTT
GTTGGAATGGGGGAGGGTACTTTAGAATATTTGCTTTTTCTACCTTGGGGACCCCCAGGGGCCA
AGCAGTCCTCCTTTAGTCACACCAAAGGCAAAAGGCCTGGCTACCTCCCCTTTAGCACGTGAGG
TCCCTACTCCCCTCCTTTCTACTCAGCTTTGCTCATCTTGGAGATTTCAGGGCAGCAGTGGGGA
AGTAAGGGGAAAGCAGGGGAAGCTTCTGACCCTGTATGGGCAACTTCCTGACTAAAGGCTGACT
GTTGTCACCAAAAACAGGTCCCTAGCCCTTACACCTATTAAAACTCCCTCTTGATCTTTCAAAG
GCAGCTAATTGCTAGCACCCTCTCCCTACCCATTCCAGGCCTCTTTTCCCTCTGTTTCTTTGTT
AGAAGGTTCTGTGGAGCTGAAACCCACCCTCTAATGGGGTTTGTTTAGTTTAGTTGGGTTCTCA
GAGTCTCCTGTTATTTTGTGTTGTTTCCAATGAAAAGCAAGTTTACCCTCAAAGTTATGCTTTT
CCAAAGAAGCTAGTGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGCTGTTGTTGTTGTTTTGTTT
GTTTTGTTTTTATGTTTCAGGTTCTAAGTGAAGTGAGGTGGAGAGGAGTTGGGAATAACCAAGG
TTTAGACATGGTGAGATAGTTACCTCTGATCTGCAAACCCCAGCAGAGAGCTGGGGTAGGATAA
GAGGGCAGAGAGGATTTCTATTCACCTTTAATATATTTTTACAAAAAAGCAAACAATTTAAAAA
CAAACCCACCGCTTCTGTACATGTCTAAATATATTTTTAGAAGTGGGTAGGATTGTGATTTCTG
ATGCAGGGCCTTTTTATAAATAGGTTAGAGTAGCCTCATCCAGATTTCTCTGTTGTTTGTTCCC
CTTGTTTTTTCTTATGTTGTGTTACTAATGTAATTTATATATTTTTTAGATCTCCCTTTCCTGT
AGAGATAAAAGTGATTTATCTTGGCAA

hide sequence

RefSeq Acc Id:

XM_039099807 ⟹ XP_038955735

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	23,967,511 - 24,066,473 (+)	NCBI
mRatBN7.2	X	20,524,502 - 20,623,459 (+)	NCBI

RefSeq Acc Id:

XM_039099808 ⟹ XP_038955736

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	23,967,511 - 24,066,473 (+)	NCBI
mRatBN7.2	X	20,524,502 - 20,623,459 (+)	NCBI

RefSeq Acc Id:

XM_039099810 ⟹ XP_038955738

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	23,967,511 - 24,066,473 (+)	NCBI
mRatBN7.2	X	20,524,503 - 20,623,459 (+)	NCBI

RefSeq Acc Id:

XM_039099813 ⟹ XP_038955741

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	24,006,139 - 24,066,473 (+)	NCBI
mRatBN7.2	X	20,562,184 - 20,623,459 (+)	NCBI

RefSeq Acc Id:

XM_039099814 ⟹ XP_038955742

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	24,006,160 - 24,066,473 (+)	NCBI
mRatBN7.2	X	20,563,143 - 20,623,459 (+)	NCBI

RefSeq Acc Id:

XM_063280064 ⟹ XP_063136134

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	23,967,511 - 24,066,473 (+)	NCBI

RefSeq Acc Id:

XM_063280065 ⟹ XP_063136135

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	23,967,126 - 24,066,473 (+)	NCBI

RefSeq Acc Id:

XM_063280066 ⟹ XP_063136136

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	23,967,509 - 24,066,473 (+)	NCBI

RefSeq Acc Id:

XM_063280067 ⟹ XP_063136137

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	23,967,508 - 24,066,473 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001101723	(Get FASTA)	NCBI Sequence Viewer
	NP_001421084	(Get FASTA)	NCBI Sequence Viewer
	NP_001421085	(Get FASTA)	NCBI Sequence Viewer
	NP_001421086	(Get FASTA)	NCBI Sequence Viewer
	NP_001421088	(Get FASTA)	NCBI Sequence Viewer
	XP_006256854	(Get FASTA)	NCBI Sequence Viewer
	XP_008771341	(Get FASTA)	NCBI Sequence Viewer
	XP_017457561	(Get FASTA)	NCBI Sequence Viewer
	XP_038955735	(Get FASTA)	NCBI Sequence Viewer
	XP_038955736	(Get FASTA)	NCBI Sequence Viewer
	XP_038955738	(Get FASTA)	NCBI Sequence Viewer
	XP_038955741	(Get FASTA)	NCBI Sequence Viewer
	XP_038955742	(Get FASTA)	NCBI Sequence Viewer
	XP_063136134	(Get FASTA)	NCBI Sequence Viewer
	XP_063136135	(Get FASTA)	NCBI Sequence Viewer
	XP_063136136	(Get FASTA)	NCBI Sequence Viewer
	XP_063136137	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL86314	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000040672
	ENSRNOP00000040672.4
	ENSRNOP00000090968
	ENSRNOP00000090968.1

RefSeq Acc Id:

NP_001101723 ⟸ NM_001108253

- UniProtKB:

D4AD31 (UniProtKB/TrEMBL), A6KLA6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MASVPVYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLHGPSIMKK
RRGSSKGHDNHKGKPLKTGSSMFIRELRGRTFDSSDEVILKPTGSQLTVEFLEENSFSVPILVL
KKDGLGMTLPSPSFTVRDVEHYVGSDKEIDVIDVARQADCKMKLGDFVKYYYSGKREKVLNVIS
LEFSDTRLSNLVETPKIVRKLSWVENLWPEECVFERPNVQKYCLMSVRDSYTDFHIDFGGTSVW
YHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVEKCYKCSVKQGQTLFIPTGWIHA
VLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTADLFKFPNFETICWYVGKHILDIFRGLRE
NRRHPASYLVHGGKALNLAFRAWTRKEALPDHEDEIPETVRTVQLIKDLAREIRLVEDIFQQNV
GKTSNIFGLQRIFPAGSIPLTRPAHSTSVSMSKLSLPSKNGSKKKGLKPKDIFKKAERKGKQSS
ALGPAGQLSYNLMDPYSHQALKTGPSQKAKLNIGGACLNDSDDDSADMDVDGSENPLALLMANG
STKRMKSVSKSRRAKIAKKVDSARLVAEQVMGDEFDLDSDDELQIDERLGKEKANLLMRSKFPR
KLPRAKPCSDPNRIREPGEVEFDIEEDYTTDEDMVEGVESKLGNGSGAGGILDLLKASRQVGGP
DYAALTEAPASPSTQEAIQGMLCMANLQSSSSSPATSSLQAWWTGGQDRSSGSSSSGLGTVSNS
PISQRTPGKRPIKRPAYWKNESEEEENASMDEQDSLGACFKDAEYIYPSLESDDDDPALKSRPK
KKKNSDDAPWSPKARVTPTLPKQDRPVREGTRVASIETGLAAAAAKLAQQELQKAQKKKYIKKK
PLLKEVEQPRPQDSNTTMTMPAPTLATTPQPVTSSSPQPPPEPKQEALSGSLADHEYTARPNAF
GMAQANRSTTPMAPGVFLTQRRPSVGSQSSQAGQGKRPKKGLATAKQRLGRILKIHRNGKLLL

hide sequence

RefSeq Acc Id:

XP_006256854 ⟸ XM_006256792

- Peptide Label:

isoform X1

- Sequence:

show sequence

MASVPVYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLHGPSIMKK
RRGSSKGHDNHKGKPLKTGSSMFIRELRGRTFDSSDEVILKPTGSQLTVEFLEENSFSVPILVL
KKDGLGMTLPSPSFTVRDVEHYVGSDKEIDVIDVARQADCKMKLGDFVKYYYSGKREKVLNVIS
LEFSDTRLSNLVETPKIVRKLSWVENLWPEECVFERPNVQKYCLMSVRDSYTDFHIDFGGTSVW
YHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVEKCYKCSVKQGQTLFIPTGWIHA
VLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTADLFKFPNFETICWYVGKHILDIFRGLRE
NRRHPASYLVHGGKALNLAFRAWTRKEALPDHEDEIPETVRTVQLIKDLAREIRLVEDIFQQNV
GKTSNIFGLQRIFPAGSIPLTRPAHSTSVSMSKLSLPSKNGSKKKGLKPKDIFKKAERKGKQSS
ALGPAGQLSYNLMDPYSHQALKTGPSQKAKLNIGGACLNDSDDDSADMDVDGSENPLALLMANG
STKRMKSVSKSRRAKIAKKVDSARLVAEQVMGDEFDLDSDDELQIDERLGKEKANLLMRSKFPR
KLPRAKPCSDPNRIREPGEVEFDIEEDYTTDEDMVEGVESKLGNGSGAGGILDLLKASRQVGGP
DYAALTEAPASPSTQEAIQGMLCMANLQSSSSSPATSSLQAWWTGGQDRSSGSSSSGLGTVSNS
PISQRTPGKRPIKRPAYWKNESEEEENASMDEQDSLGACFKDAEYIYPSLESDDDDPALKSRPK
KKKNSDDAPWSPKARVTPTLPKQDRPVREGTRVASIETGLAAAAAKLAQQELQKAQKKKYIKKK
PLLKEVEQPRPQDSNTTMTMPAPTLATTPQPVTSSSPQPPPEPKQEALSGSLADHEYTARPNAF
GMAQANRSTTPMAPGVFLTQRRPSVGSQSSQAGQGKRPKKGLATAKQRLGRILKIHRNGKLLL

hide sequence

RefSeq Acc Id:	XP_008771341 ⟸ XM_008773119
- Peptide Label:	isoform X1
- UniProtKB:	D4AD31 (UniProtKB/TrEMBL), A6KLA6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASVPVYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLHGPSIMKK RRGSSKGHDNHKGKPLKTGSSMFIRELRGRTFDSSDEVILKPTGSQLTVEFLEENSFSVPILVL KKDGLGMTLPSPSFTVRDVEHYVGSDKEIDVIDVARQADCKMKLGDFVKYYYSGKREKVLNVIS LEFSDTRLSNLVETPKIVRKLSWVENLWPEECVFERPNVQKYCLMSVRDSYTDFHIDFGGTSVW YHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVEKCYKCSVKQGQTLFIPTGWIHA VLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTADLFKFPNFETICWYVGKHILDIFRGLRE NRRHPASYLVHGGKALNLAFRAWTRKEALPDHEDEIPETVRTVQLIKDLAREIRLVEDIFQQNV GKTSNIFGLQRIFPAGSIPLTRPAHSTSVSMSKLSLPSKNGSKKKGLKPKDIFKKAERKGKQSS ALGPAGQLSYNLMDPYSHQALKTGPSQKAKLNIGGACLNDSDDDSADMDVDGSENPLALLMANG STKRMKSVSKSRRAKIAKKVDSARLVAEQVMGDEFDLDSDDELQIDERLGKEKANLLMRSKFPR KLPRAKPCSDPNRIREPGEVEFDIEEDYTTDEDMVEGVESKLGNGSGAGGILDLLKASRQVGGP DYAALTEAPASPSTQEAIQGMLCMANLQSSSSSPATSSLQAWWTGGQDRSSGSSSSGLGTVSNS PISQRTPGKRPIKRPAYWKNESEEEENASMDEQDSLGACFKDAEYIYPSLESDDDDPALKSRPK KKKNSDDAPWSPKARVTPTLPKQDRPVREGTRVASIETGLAAAAAKLAQQELQKAQKKKYIKKK PLLKEVEQPRPQDSNTTMTMPAPTLATTPQPVTSSSPQPPPEPKQEALSGSLADHEYTARPNAF GMAQANRSTTPMAPGVFLTQRRPSVGSQSSQAGQGKRPKKGLATAKQRLGRILKIHRNGKLLL hide sequence

RefSeq Acc Id:	XP_017457561 ⟸ XM_017602072
- Peptide Label:	isoform X1
- UniProtKB:	D4AD31 (UniProtKB/TrEMBL), A6KLA6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASVPVYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLHGPSIMKK RRGSSKGHDNHKGKPLKTGSSMFIRELRGRTFDSSDEVILKPTGSQLTVEFLEENSFSVPILVL KKDGLGMTLPSPSFTVRDVEHYVGSDKEIDVIDVARQADCKMKLGDFVKYYYSGKREKVLNVIS LEFSDTRLSNLVETPKIVRKLSWVENLWPEECVFERPNVQKYCLMSVRDSYTDFHIDFGGTSVW YHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVEKCYKCSVKQGQTLFIPTGWIHA VLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTADLFKFPNFETICWYVGKHILDIFRGLRE NRRHPASYLVHGGKALNLAFRAWTRKEALPDHEDEIPETVRTVQLIKDLAREIRLVEDIFQQNV GKTSNIFGLQRIFPAGSIPLTRPAHSTSVSMSKLSLPSKNGSKKKGLKPKDIFKKAERKGKQSS ALGPAGQLSYNLMDPYSHQALKTGPSQKAKLNIGGACLNDSDDDSADMDVDGSENPLALLMANG STKRMKSVSKSRRAKIAKKVDSARLVAEQVMGDEFDLDSDDELQIDERLGKEKANLLMRSKFPR KLPRAKPCSDPNRIREPGEVEFDIEEDYTTDEDMVEGVESKLGNGSGAGGILDLLKASRQVGGP DYAALTEAPASPSTQEAIQGMLCMANLQSSSSSPATSSLQAWWTGGQDRSSGSSSSGLGTVSNS PISQRTPGKRPIKRPAYWKNESEEEENASMDEQDSLGACFKDAEYIYPSLESDDDDPALKSRPK KKKNSDDAPWSPKARVTPTLPKQDRPVREGTRVASIETGLAAAAAKLAQQELQKAQKKKYIKKK PLLKEVEQPRPQDSNTTMTMPAPTLATTPQPVTSSSPQPPPEPKQEALSGSLADHEYTARPNAF GMAQANRSTTPMAPGVFLTQRRPSVGSQSSQAGQGKRPKKGLATAKQRLGRILKIHRNGKLLL hide sequence

Ensembl Acc Id:

ENSRNOP00000040672 ⟸ ENSRNOT00000045708

RefSeq Acc Id:	XP_038955736 ⟸ XM_039099808
- Peptide Label:	isoform X1
- UniProtKB:	D4AD31 (UniProtKB/TrEMBL), A6KLA6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038955735 ⟸ XM_039099807
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038955738 ⟸ XM_039099810
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6AC06 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038955741 ⟸ XM_039099813
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038955742 ⟸ XM_039099814
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063136135 ⟸ XM_063280065
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6AC06 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063136137 ⟸ XM_063280067
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063136136 ⟸ XM_063280066
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063136134 ⟸ XM_063280064
- Peptide Label:	isoform X2

Protein Domains

JmjC PHD-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4AD31-F1-model_v2	AlphaFold	D4AD31	1-1023	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13701767

Promoter ID:

EPDNEW_R12291

Type:

multiple initiation site

Name:

Phf8_1

Description:

PHD finger protein 8

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	X	21,063,545 - 21,063,605	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1561065	AgrOrtholog
BioCyc Gene	G2FUF-2769	BioCyc
Ensembl Genes	ENSRNOG00000002708	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000045708	ENTREZGENE
	ENSRNOT00000045708.7	UniProtKB/TrEMBL
	ENSRNOT00000093422	ENTREZGENE
	ENSRNOT00000093422.3	UniProtKB/TrEMBL
Gene3D-CATH	1.20.58.1360	UniProtKB/TrEMBL
	Cupin	UniProtKB/TrEMBL
InterPro	JHD	UniProtKB/TrEMBL
	JHDM1_Histone_Demethylase	UniProtKB/TrEMBL
	JmjC_dom	UniProtKB/TrEMBL
	Zinc_finger_PHD-type_CS	UniProtKB/TrEMBL
	Znf_FYVE_PHD	UniProtKB/TrEMBL
	Znf_PHD	UniProtKB/TrEMBL
	Znf_PHD-finger	UniProtKB/TrEMBL
KEGG Report	rno:317425	UniProtKB/TrEMBL
NCBI Gene	317425	ENTREZGENE
PANTHER	PHD/F-BOX CONTAINING PROTEIN	UniProtKB/TrEMBL
Pfam	JHD	UniProtKB/TrEMBL
	JmjC	UniProtKB/TrEMBL
	PHD	UniProtKB/TrEMBL
PhenoGen	Phf8	PhenoGen
PROSITE	JMJC	UniProtKB/TrEMBL
	ZF_PHD_1	UniProtKB/TrEMBL
	ZF_PHD_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000002708	RatGTEx
SMART	JmjC	UniProtKB/TrEMBL
	PHD	UniProtKB/TrEMBL
Superfamily-SCOP	Clavaminate synthase-like	UniProtKB/TrEMBL
	FYVE_PHD_ZnF	UniProtKB/TrEMBL
UniProt	A0A8I6AC06	ENTREZGENE, UniProtKB/TrEMBL
	A6KLA6	ENTREZGENE, UniProtKB/TrEMBL
	D4AD31	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-03-09	Phf8	PHD finger protein 8	LOC102550078	uncharacterized LOC102550078	Data merged from RGD:7608019	737654	PROVISIONAL
2013-12-18	LOC102550078	uncharacterized LOC102550078			Symbol and Name status set to provisional	70820	PROVISIONAL
2012-10-11	Phf8	PHD finger protein 8	RGD1561065	similar to mKIAA1111 protein	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1561065	similar to mKIAA1111 protein	RGD1561065_predicted	similar to mKIAA1111 protein (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-07	RGD1561065_predicted	similar to mKIAA1111 protein (predicted)	LOC317425	similar to mKIAA1111 protein	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC317425	similar to mKIAA1111 protein			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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