Sav1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 6 | 94,214,514 - 94,236,354 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 6 | 88,478,536 - 88,500,121 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 6 | 88,478,539 - 88,499,968 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 6 | 88,878,630 - 88,899,810 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 6 | 89,178,093 - 89,199,271 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 6 | 88,617,609 - 88,638,787 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 6 | 92,376,470 - 92,398,678 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 6 | 92,376,093 - 92,398,525 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 6 | 101,825,584 - 101,846,408 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 6 | 92,081,608 - 92,101,975 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 6 | 92,084,683 - 92,105,492 (-) | NCBI | | | | | Celera | 6 | 86,974,336 - 86,994,740 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | q24 | NCBI | | | | |
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SAV1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 14 | 50,633,580 - 50,668,306 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 14 | 50,632,058 - 50,668,306 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 14 | 51,100,298 - 51,135,024 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 14 | 50,170,110 - 50,204,773 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 14 | 50,170,109 - 50,204,773 | NCBI | | | | | Celera | 14 | 30,967,387 - 31,002,030 (-) | NCBI | | Celera | | | Cytogenetic Map | 14 | q22.1 | NCBI | | | | | HuRef | 14 | 31,225,872 - 31,260,642 (-) | NCBI | | HuRef | | | CHM1_1 | 14 | 51,038,840 - 51,073,614 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 14 | 44,839,725 - 44,874,442 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Sav1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 12 | 70,011,786 - 70,033,864 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 12 | 70,011,786 - 70,033,776 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 12 | 69,965,009 - 69,988,141 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 12 | 69,965,012 - 69,987,002 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 12 | 71,065,999 - 71,087,989 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 12 | 70,883,617 - 70,905,607 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 12 | 71,066,736 - 71,086,376 (-) | NCBI | | Celera | | | Cytogenetic Map | 12 | C2 | NCBI | | | | | cM Map | 12 | 28.94 | NCBI | | | | |
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Sav1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955409 | 12,200,721 - 12,220,410 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955409 | 12,200,721 - 12,221,520 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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SAV1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 15 | 51,772,688 - 51,807,334 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 14 | 50,989,615 - 51,024,137 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 14 | 31,223,140 - 31,257,871 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 14 | 49,525,687 - 49,560,347 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 14 | 49,525,687 - 49,560,347 (-) | Ensembl | panpan1.1 | | panPan2 | |
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SAV1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 8 | 27,034,606 - 27,061,926 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 8 | 27,022,628 - 27,062,611 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 8 | 26,788,420 - 26,815,739 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 8 | 27,212,701 - 27,240,724 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 8 | 27,213,635 - 27,240,729 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 8 | 26,868,220 - 26,896,193 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 8 | 26,941,329 - 26,968,924 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 8 | 27,285,743 - 27,313,496 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Sav1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024408640 | 59,213,993 - 59,236,456 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936495 | 14,954,542 - 14,976,580 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936495 | 14,955,234 - 14,977,720 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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SAV1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 1 | 180,406,162 - 180,434,196 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 180,404,871 - 180,434,458 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 200,696,535 - 200,724,804 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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SAV1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 24 | 27,710,256 - 27,747,638 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 24 | 27,711,970 - 27,747,647 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666053 | 16,021,200 - 16,056,413 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Sav1 (Heterocephalus glaber - naked mole-rat) |
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