Anxa5 (annexin A5) - Rat Genome Database

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Pathways
Gene: Anxa5 (annexin A5) Ictidomys tridecemlineatus
Analyze
Symbol: Anxa5
Name: annexin A5
RGD ID: 12668812
Description: ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); identical protein binding (ortholog); P-type calcium transporter activity (ortholog); INVOLVED IN cellular response to gonadotropin-releasing hormone (ortholog); cellular response to lead ion (ortholog); negative regulation of blood coagulation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); autoimmune disease of the nervous system (ortholog); FOUND IN axon terminus (ortholog); cell projection (ortholog); dendrite (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530166,159,815 - 66,193,477 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936662925,940 - 939,451 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936662926,302 - 959,964 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse:




References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Anxa5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530166,159,815 - 66,193,477 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936662925,940 - 939,451 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936662926,302 - 959,964 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANXA5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384121,667,946 - 121,696,980 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4121,667,396 - 121,697,061 (-)Ensemblhg38GRCh38
GRCh374122,589,101 - 122,618,135 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 364122,808,598 - 122,837,626 (-)NCBIBuild 36Build 36hg18NCBI36
Build 344122,946,752 - 122,975,781NCBI
Celera4119,974,664 - 120,003,661 (-)NCBICelera
Cytogenetic Map4q27ENTREZGENE
HuRef4118,316,005 - 118,345,109 (-)NCBIHuRef
CHM1_14122,565,582 - 122,594,573 (-)NCBICHM1_1
T2T-CHM13v2.04124,971,975 - 125,001,007 (-)NCBIT2T-CHM13v2.0
Anxa5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39336,503,072 - 36,530,036 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl336,503,072 - 36,530,043 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38336,448,923 - 36,475,887 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl336,448,923 - 36,475,894 (-)Ensemblmm10GRCm38
MGSCv37336,347,845 - 36,374,809 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36336,640,474 - 36,667,247 (-)NCBIMGSCv36mm8
Celera336,332,154 - 36,359,060 (-)NCBICelera
Cytogenetic Map3BNCBI
cM Map317.46NCBI
Anxa5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82121,242,133 - 121,272,935 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl2121,242,136 - 121,281,400 (-)EnsemblGRCr8
mRatBN7.22119,314,007 - 119,344,703 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2119,314,007 - 119,353,369 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx2125,868,632 - 125,899,139 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02123,981,142 - 124,011,637 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02118,610,122 - 118,640,625 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd2120,501,807 - 120,532,295 (-)NCBIDahl_SR_JrHsd
Lyon_Normotensive2120,566,687 - 120,597,177 (-)NCBILyon_Normotensive
Lyon_Hypertensive2120,431,593 - 120,462,092 (-)NCBILyon_Hypertensive
F344_StmMcwi2120,257,906 - 120,288,391 (-)NCBIF344_StmMcwi
Rnor_6.02123,162,477 - 123,194,730 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2123,162,461 - 123,193,130 (-)Ensemblrn6Rnor6.0
Rnor_5.02142,777,624 - 142,808,420 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.42122,949,210 - 122,979,757 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera2114,271,560 - 114,302,133 (-)NCBICelera
RGSC_v3.12122,894,171 - 122,924,719 (-)NCBI
RH 3.4 Map2623.7RGD
Cytogenetic Map2q25NCBI
Anxa5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542818,873,782 - 18,907,955 (+)Ensembl
ChiLan1.0NW_00495542818,873,782 - 18,907,955 (+)NCBIChiLan1.0ChiLan1.0
ANXA5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23119,463,763 - 119,492,850 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14119,732,681 - 119,761,758 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04113,868,218 - 113,897,243 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14125,006,038 - 125,034,972 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4125,006,038 - 125,034,972 (-)EnsemblpanPan2panpan1.1
ANXA5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11918,419,936 - 18,450,088 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1918,407,587 - 18,570,378 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1918,636,905 - 18,666,325 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01918,538,322 - 18,568,429 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1918,538,347 - 18,569,685 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11918,489,737 - 18,519,390 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01918,771,009 - 18,800,422 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01919,247,832 - 19,277,209 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
ANXA5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl8102,388,103 - 102,425,750 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.18102,387,833 - 102,420,868 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.28109,609,049 - 109,641,864 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ANXA5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1768,940,365 - 68,970,324 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl768,940,304 - 68,970,811 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366603747,900,616 - 47,930,596 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Anxa5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247771,919,602 - 1,970,059 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247771,921,354 - 1,969,772 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Anxa5
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v13117,508,000 - 117,538,898 (+)NCBIRrattus_CSIRO_v1


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSSTOT00000015243   ⟹   ENSSTOP00000013662
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_004936662925,940 - 939,451 (-)Ensembl
RefSeq Acc Id: XM_013363441   ⟹   XP_013218895
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440530166,159,815 - 66,193,477 (+)NCBI
SpeTri2.0NW_004936662926,302 - 959,964 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_077878293 (Get FASTA)   NCBI Sequence Viewer  
  XP_077878294 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000013662.3
GenBank Protein KAG3276254 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_013218895   ⟸   XM_013363441
- Sequence:
Ensembl Acc Id: ENSSTOP00000013662   ⟸   ENSSTOT00000015243


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000015236 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000015243.3 UniProtKB/TrEMBL
Gene3D-CATH 1.10.220.10 UniProtKB/TrEMBL
InterPro Annexin UniProtKB/TrEMBL
  Annexin_repeat UniProtKB/TrEMBL
  Annexin_repeat_CS UniProtKB/TrEMBL
  Annexin_sf UniProtKB/TrEMBL
  ANX5 UniProtKB/TrEMBL
NCBI Gene Anxa5 ENTREZGENE
PANTHER ANNEXIN UniProtKB/TrEMBL
  PTHR10502:SF26 UniProtKB/TrEMBL
Pfam Annexin UniProtKB/TrEMBL
PRINTS ANNEXIN UniProtKB/TrEMBL
  ANNEXINV UniProtKB/TrEMBL
PROSITE ANNEXIN_1 UniProtKB/TrEMBL
  ANNEXIN_2 UniProtKB/TrEMBL
SMART ANX UniProtKB/TrEMBL
Superfamily-SCOP SSF47874 UniProtKB/TrEMBL
UniProt I3MPF2_ICTTR UniProtKB/TrEMBL