ANXA5 (annexin A5) - Rat Genome Database

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Gene: ANXA5 (annexin A5) Canis lupus familiaris
Analyze
Symbol: ANXA5
Name: annexin A5
RGD ID: 12374412
Description: ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); identical protein binding (ortholog); P-type calcium transporter activity (ortholog); INVOLVED IN cellular response to gonadotropin-releasing hormone (ortholog); cellular response to lead ion (ortholog); negative regulation of blood coagulation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); autoimmune disease of the nervous system (ortholog); FOUND IN axon terminus (ortholog); cell projection (ortholog); dendrite (ortholog)
Type: protein-coding
RefSeq Status: PROVISIONAL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11918,419,936 - 18,450,088 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1918,407,587 - 18,570,378 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1918,636,905 - 18,666,325 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01918,538,322 - 18,568,429 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1918,538,347 - 18,569,685 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11918,489,737 - 18,519,390 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01918,771,009 - 18,800,422 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01919,247,832 - 19,277,209 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
ANXA5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11918,419,936 - 18,450,088 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1918,407,587 - 18,570,378 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1918,636,905 - 18,666,325 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01918,538,322 - 18,568,429 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1918,538,347 - 18,569,685 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11918,489,737 - 18,519,390 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01918,771,009 - 18,800,422 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01919,247,832 - 19,277,209 (+)NCBIUU_Cfam_GSD_1.0
ANXA5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384121,667,946 - 121,696,980 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4121,667,946 - 121,696,995 (-)EnsemblGRCh38hg38GRCh38
GRCh374122,589,101 - 122,618,135 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 364122,808,598 - 122,837,626 (-)NCBINCBI36Build 36hg18NCBI36
Build 344122,946,752 - 122,975,781NCBI
Celera4119,974,664 - 120,003,661 (-)NCBICelera
Cytogenetic Map4q27ENTREZGENE
HuRef4118,316,005 - 118,345,109 (-)NCBIHuRef
CHM1_14122,565,582 - 122,594,573 (-)NCBICHM1_1
T2T-CHM13v2.04124,971,975 - 125,001,007 (-)NCBIT2T-CHM13v2.0
Anxa5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39336,503,072 - 36,530,036 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl336,503,072 - 36,530,043 (-)EnsemblGRCm39 Ensembl
GRCm38336,448,923 - 36,475,887 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl336,448,923 - 36,475,894 (-)EnsemblGRCm38mm10GRCm38
MGSCv37336,347,845 - 36,374,809 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36336,640,474 - 36,667,247 (-)NCBIMGSCv36mm8
Celera336,332,154 - 36,359,060 (-)NCBICelera
Cytogenetic Map3BNCBI
cM Map317.46NCBI
Anxa5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82121,242,133 - 121,272,935 (-)NCBIGRCr8
mRatBN7.22119,314,007 - 119,344,703 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2119,314,007 - 119,353,369 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2125,868,632 - 125,899,139 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02123,981,142 - 124,011,637 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02118,610,122 - 118,640,625 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02123,162,477 - 123,194,730 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2123,162,461 - 123,193,130 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02142,777,624 - 142,808,420 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42122,949,210 - 122,979,757 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12122,894,171 - 122,924,719 (-)NCBI
Celera2114,271,560 - 114,302,133 (-)NCBICelera
RH 3.4 Map2623.7RGD
Cytogenetic Map2q25NCBI
Anxa5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542818,873,782 - 18,907,955 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542818,873,782 - 18,907,955 (+)NCBIChiLan1.0ChiLan1.0
ANXA5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23119,463,763 - 119,492,850 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14119,732,681 - 119,761,758 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04113,868,218 - 113,897,243 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14125,006,038 - 125,034,972 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4125,006,038 - 125,034,972 (-)Ensemblpanpan1.1panPan2
Anxa5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530166,159,815 - 66,193,477 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936662925,940 - 939,451 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936662926,302 - 959,964 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANXA5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl8102,388,103 - 102,425,750 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.18102,387,833 - 102,420,868 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.28109,609,049 - 109,641,864 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ANXA5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1768,940,365 - 68,970,324 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl768,940,304 - 68,970,811 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603747,900,616 - 47,930,596 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Anxa5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247771,919,602 - 1,970,059 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247771,921,354 - 1,969,772 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ANXA5
330 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence


Ensembl Acc Id: ENSCAFT00000006664   ⟹   ENSCAFP00000006170
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1918,407,587 - 18,449,638 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000062300   ⟹   ENSCAFP00000046866
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1918,419,639 - 18,440,934 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000066120   ⟹   ENSCAFP00000057810
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1918,419,940 - 18,570,378 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000069441   ⟹   ENSCAFP00000060342
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1918,420,256 - 18,449,638 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000091380   ⟹   ENSCAFP00000054077
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1918,420,229 - 18,449,638 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845038066   ⟹   ENSCAFP00845029822
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1918,538,347 - 18,569,685 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845038159   ⟹   ENSCAFP00845029890
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1918,538,347 - 18,569,685 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845038270   ⟹   ENSCAFP00845029973
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1918,538,663 - 18,569,685 (+)Ensembl
RefSeq Acc Id: NM_001314118   ⟹   NP_001301047
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11918,420,229 - 18,449,638 (+)NCBI
Dog10K_Boxer_Tasha1918,636,905 - 18,666,325 (+)NCBI
ROS_Cfam_1.01918,538,636 - 18,567,979 (+)NCBI
UMICH_Zoey_3.11918,489,737 - 18,519,390 (+)NCBI
UNSW_CanFamBas_1.01918,771,009 - 18,800,422 (+)NCBI
UU_Cfam_GSD_1.01919,247,832 - 19,277,209 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038425565   ⟹   XP_038281493
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01918,538,322 - 18,568,429 (+)NCBI
RefSeq Acc Id: NP_001301047   ⟸   NM_001314118
- UniProtKB: A0A0F7RNT6 (UniProtKB/TrEMBL),   A0A8C0L1T0 (UniProtKB/TrEMBL),   A0A8P0P6Z2 (UniProtKB/TrEMBL),   A0A8C0PDZ5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCAFP00000060342   ⟸   ENSCAFT00000069441
Ensembl Acc Id: ENSCAFP00000054077   ⟸   ENSCAFT00000091380
Ensembl Acc Id: ENSCAFP00000046866   ⟸   ENSCAFT00000062300
Ensembl Acc Id: ENSCAFP00000006170   ⟸   ENSCAFT00000006664
Ensembl Acc Id: ENSCAFP00000057810   ⟸   ENSCAFT00000066120
RefSeq Acc Id: XP_038281493   ⟸   XM_038425565
- Peptide Label: isoform X1
- UniProtKB: A0A0F7RNT6 (UniProtKB/TrEMBL),   A0A8C0L1T0 (UniProtKB/TrEMBL),   A0A8P0P6Z2 (UniProtKB/TrEMBL),   A0A8C0PDZ5 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845029890   ⟸   ENSCAFT00845038159
Ensembl Acc Id: ENSCAFP00845029973   ⟸   ENSCAFT00845038270
Ensembl Acc Id: ENSCAFP00845029822   ⟸   ENSCAFT00845038066

Promoters
RGD ID:13686699
Promoter ID:EPDNEW_C4767
Type:initiation region
Name:ANXA5_1
Description:annexin A5
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11918,419,980 - 18,420,040EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000004151 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030024197 UniProtKB/TrEMBL
  ENSCAFG00040016080 UniProtKB/TrEMBL
  ENSCAFG00845021481 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000066120.2 UniProtKB/TrEMBL
  ENSCAFT00000069441.2 UniProtKB/TrEMBL
  ENSCAFT00000091380.2 UniProtKB/TrEMBL
  ENSCAFT00030044535.1 UniProtKB/TrEMBL
  ENSCAFT00030044708.1 UniProtKB/TrEMBL
  ENSCAFT00030044730.1 UniProtKB/TrEMBL
  ENSCAFT00040030059.1 UniProtKB/TrEMBL
  ENSCAFT00845038066 ENTREZGENE
  ENSCAFT00845038066.1 UniProtKB/TrEMBL
  ENSCAFT00845038159.1 UniProtKB/TrEMBL
  ENSCAFT00845038270.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.220.10 UniProtKB/TrEMBL
InterPro Annexin UniProtKB/TrEMBL
  Annexin_repeat UniProtKB/TrEMBL
  Annexin_repeat_CS UniProtKB/TrEMBL
  Annexin_sf UniProtKB/TrEMBL
  ANX5 UniProtKB/TrEMBL
KEGG Report cfa:476094 UniProtKB/TrEMBL
NCBI Gene ANXA5 ENTREZGENE
PANTHER ANNEXIN UniProtKB/TrEMBL
  PTHR10502:SF26 UniProtKB/TrEMBL
Pfam Annexin UniProtKB/TrEMBL
PRINTS ANNEXIN UniProtKB/TrEMBL
  ANNEXINV UniProtKB/TrEMBL
PROSITE ANNEXIN_1 UniProtKB/TrEMBL
  ANNEXIN_2 UniProtKB/TrEMBL
SMART ANX UniProtKB/TrEMBL
Superfamily-SCOP SSF47874 UniProtKB/TrEMBL
UniProt A0A0F7RNT6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0L1T0 ENTREZGENE
  A0A8C0PDZ5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0PHB3_CANLF UniProtKB/TrEMBL
  A0A8C0RSP5_CANLF UniProtKB/TrEMBL
  A0A8I3P8H9_CANLF UniProtKB/TrEMBL
  A0A8I3PHG8_CANLF UniProtKB/TrEMBL
  A0A8P0P6Z2 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:37942 ENTREZGENE