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Gene: EFNB3 (ephrin B3) Pan paniscus

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Symbol:

EFNB3

Name:

ephrin B3

RGD ID:

11977180

Description:

ENCODES a protein that exhibits ephrin receptor binding (inferred); INVOLVED IN adult walking behavior (ortholog); axon choice point recognition (ortholog); axon guidance (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH movement disease (ortholog); FOUND IN postsynaptic density membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

ephrin-B3

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	EFNB3 (ephrin B3)	NCBI	Ortholog
Mus musculus (house mouse):	Efnb3 (ephrin B3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Efnb3 (ephrin B3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Efnb3 (ephrin B3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	EFNB3 (ephrin B3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Efnb3 (ephrin B3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	EFNB3 (ephrin B3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	EFNB3 (ephrin B3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Efnb3 (ephrin B3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Efnb3 (ephrin B3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	15,300,373 - 15,306,830 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	17,266,438 - 17,273,211 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	7,737,297 - 7,743,732 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	7,724,982 - 7,731,270 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	7,724,983 - 7,731,270 (+)	Ensembl			panPan2	panpan1.1

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

movement disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

adult walking behavior (ISO)

axon choice point recognition (ISO)

axon guidance (IEA,ISO)

cell differentiation (IEA)

cell-cell signaling (IEA)

ephrin receptor signaling pathway (IEA,ISO)

negative regulation of axonogenesis (IEA)

nervous system development (IEA)

positive regulation of presynapse assembly (ISO)

positive regulation of synaptic transmission (ISO)

T cell costimulation (ISO)

trans-synaptic signaling by trans-synaptic complex, modulating synaptic transmission (IEA)

Cellular Component

glutamatergic synapse (IEA)

hippocampal mossy fiber to CA3 synapse (IEA)

membrane (IEA)

plasma membrane (IEA)

postsynaptic density membrane (ISO)

presynaptic membrane (IEA)

Molecular Function

ephrin receptor binding (IEA)

protein binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

ephrin - ephrin receptor bidirectional signaling axis (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

EFNB3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	15,300,373 - 15,306,830 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	17,266,438 - 17,273,211 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	7,737,297 - 7,743,732 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	7,724,982 - 7,731,270 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	7,724,983 - 7,731,270 (+)	Ensembl			panPan2	panpan1.1

EFNB3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	7,705,202 - 7,711,372 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	7,705,202 - 7,711,372 (+)	Ensembl			hg38	GRCh38
GRCh37	17	7,608,520 - 7,614,690 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	7,549,245 - 7,555,418 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	17	7,549,244 - 7,555,416	NCBI
Celera	17	7,634,880 - 7,641,053 (+)	NCBI		Celera
Cytogenetic Map	17	p13.1	NCBI
HuRef	17	7,501,856 - 7,508,029 (+)	NCBI		HuRef
CHM1_1	17	7,617,673 - 7,623,846 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	17	7,609,322 - 7,615,492 (+)	NCBI		T2T-CHM13v2.0

Efnb3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	69,444,918 - 69,452,428 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	69,444,918 - 69,451,031 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	11	69,554,092 - 69,561,150 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	69,554,092 - 69,560,205 (-)	Ensembl			mm10	GRCm38
MGSCv37	11	69,367,594 - 69,373,739 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	11	69,370,320 - 69,376,373 (-)	NCBI		MGSCv36	mm8
Celera	11	76,517,045 - 76,523,190 (-)	NCBI		Celera
Cytogenetic Map	11	B3	NCBI
cM Map	11	42.8	NCBI

Efnb3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	54,773,282 - 54,780,727 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	10	54,773,282 - 54,797,651 (-)	Ensembl				GRCr8
mRatBN7.2	10	54,274,506 - 54,281,951 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	54,274,506 - 54,280,471 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	10	58,936,903 - 58,942,873 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	58,425,447 - 58,431,417 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	53,933,139 - 53,939,103 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	10	57,714,302 - 57,720,267 (-)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	10	58,371,716 - 58,377,681 (-)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	10	60,039,302 - 60,045,267 (-)	NCBI		Lyon_Hypertensive
F344_StmMcwi	10	59,954,369 - 59,960,334 (-)	NCBI		F344_StmMcwi
Rnor_6.0	10	56,161,431 - 56,168,819 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	56,161,432 - 56,167,426 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	10	55,906,788 - 55,912,782 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	10	56,373,322 - 56,379,316 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	10	53,428,729 - 53,434,697 (-)	NCBI		Celera
Cytogenetic Map	10	q24	NCBI

Efnb3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955467	9,217,796 - 9,224,940 (-)	Ensembl
ChiLan1.0	NW_004955467	9,217,796 - 9,225,223 (-)	NCBI	ChiLan1.0	ChiLan1.0

EFNB3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	32,588,062 - 32,592,390 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	32,574,134 - 32,594,333 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	32,727,185 - 32,733,144 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	32,692,839 - 32,698,781 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	32,692,950 - 32,698,808 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	32,660,715 - 32,666,672 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	32,616,938 - 32,622,881 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	32,795,890 - 32,801,854 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Efnb3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	47,480,176 - 47,486,382 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936595	954,383 - 960,589 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936595	954,383 - 960,573 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

EFNB3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	52,970,285 - 52,976,257 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	12	52,970,398 - 52,976,260 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	55,198,063 - 55,203,956 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

EFNB3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	7,087,116 - 7,093,457 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	7,087,584 - 7,093,621 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666059	14,315,447 - 14,322,011 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Efnb3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624786	10,297,807 - 10,304,473 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624786	10,297,795 - 10,304,363 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Efnb3
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	9	49,165,136 - 49,170,422 (-)	NCBI		Rrattus_CSIRO_v1

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003810065	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000019	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSPPAT00000032805 ⟹ ENSPPAP00000010158

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	17	7,724,983 - 7,731,270 (+)	Ensembl

RefSeq Acc Id:

XM_003810065 ⟹ XP_003810113

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	19	15,300,373 - 15,306,830 (+)	NCBI
NHGRI_mPanPan1	17	17,266,438 - 17,273,211 (+)	NCBI
Mhudiblu_PPA_v0	17	7,737,297 - 7,743,732 (+)	NCBI
PanPan1.1	17	7,724,982 - 7,731,270 (+)	NCBI

Sequence:

show sequence

TGTGGGGGGCGTGGGCCGCGGGATGCTGCCGCCCGCTCCGCCTCGAGCTCCAGCTCCGGTTTTT
CCCTCCACCATCCTCTGCCCCTCCCCGCCTCTCCTTTAACTCCCCCTCCTGGGCTCGGGACTGG
TTTCCTCCCTTAGCCCGCTGCCCTCAATCCCGGCGAGGCTGGGGCTCCGGCTCGGCGCCCCCTT
CCTCGCTCCCTGGTCCGGCGCCCCATGCCGCCCCCGCCCGGCCCCCGGCTCCCCCAGTCCCCCA
CTTAGGCGGACTCACAGATCCCGGGGTGCTGGCGCGTGGGCCGGGGGCGCGTAGGGCGCCTGCA
GACGGCCCCTGGAAGGGCTCTGGTGGGGCTGAGCGCTCTGCCGCGGGGCGCGGGCACAGCAGGA
AGCAGGTCCGCGTGGGCGCTGGGGGCGTCAGCTACCGGGGTGGTCCGGGCTGAAGAGCCAGGCA
GCCAAGGCAGCCACCCCGGGGGGTGAGCGACTTTGGGGGAGTTGGTGCCCCGCCCCCCAGGCCT
TGGCGGGGTCATGGGGCCCCCCCATTCTGGGCCGGGGGGCGTGCGAGTCGGGGCCCTGCTGCTG
TTGGGGGTTTTGGGGCTGGTGTCTGGGCTCAGCCTGGAGCCTGTCTACTGGAACTCGGCGAATA
AGAGGTTCCAGGCAGAGGGTGGTTATGTGCTGTACCCTCAGATCGGGGACCGGCTAGACCTGCT
CTGCCCCCGGGCCCGGCCTCCTGGCCCTCACTCCTCTCCTAATTATGAGTTCTACAAGCTGTAC
CTGGTAGGGGGTGCCCAGGGCCGGCGCTGTGAGGCACCCCCTGCCCCAAACCTCCTTCTCACTT
GTGATCGCCCAGACCTGGATCTCCGCTTCACCATCAAGTTCCAGGAGTATAGCCCTAATCTCTG
GGGCCACGAGTTCCGCTCGCACCACGATTACTACATCATTGCCACATCGGATGGGACCCGGGAG
GGCCTGGAGAGCCTGCAGGGAGGTGTGTGCCTAACCAGAGGCATGAAGGTGCTTCTCCGAGTGG
GACAAAGTCCCCGAGGAGGGGCTGCCCCCCGAAAACCTGTGTCTGAAATGCCCATGGAAAGAGA
CCGAGGGGCAGCCCACAGCCTGGAGCCTGGGAGGGAGAACCTGCCAGGTGACCCCACCAGCAAT
GCAACCTCCCGGGGTGCTGAAGGCCCCCTGCCCCCTCCCAGCATGCCTGCAGTGGCTGGGGCAG
CAGGGGGGCTGGCACTGCTCTTGCTGGGCGTGGCAGGGGCTGGGGGTGCCATGTGTTGGCGGAG
ACGGCGGGCCAAGCCTTCGGAGAGTCGCCACCCTGGTCCTGGCTCCTTCGGGAGGGGAGGGTCT
CTGGGCCTGGGGGGTGGAGGTGGGATGGGACCTCGGGAGGCTGAGCCTGGGGAGCTAGGGATAG
CTCTGCGGGGCGGCGGGGCTGCAGATCCCCCCTTCTGCCCCCACTATGAGAAGGTGAGTGGTGA
CTATGGGCATCCTGTGTATATCGTGCAGGATGGGCCCCCCCAGAGCCCTCCAAACATCTACTAC
AAGGTATGAGGGCTCCTCTCACGTGGCTATCCTGAATCCAGCCCTTCTTGGGGTGCTCCTCCAG
TTTAATTCCTGGTTTGAGGGACACCTCTAACATCTCGGCCCCCTGTGCCCCCCCAGCCCCTTCA
CTCCTCCCGGCTGCTGTCCTCGTCTCCACTTTTAGGATTCCTTAGGATTCCCACTGCCCCACTT
CCTGCCCTCCCGTTTGGCCATGGGTGCCCCCCTCTGTCTCAGTGTCCCTGGATCCTTTTTCCTT
GGGGAGGGGCACAGGCTCAGCCTCCTCTCTGACCATGACCCAGGCATCCTTGTCCCCCTCACCC
ACCCAGAGCTAGGGGCGGGAACAGCCCACCTTTTGGTTGGCACCGCCTTCTTTCTGCCTCTCAC
TGGTTTTCTCTTCTCTCTATCTCTTATTCTTTCCCTCTCTTCCGTCTTTAGGTCTGTTCTTCTT
CCCTAGCATCCTCCTCCCCACATCTCCTTTCACCCTCTTGGCTTCTTATCCTGTGCCTCTCCCA
TCTCCTGGGTGGGGGCATCAAAGCATTTCTCCCCTTAGCTTTCAGCCCCCCTTCTGACCTCTCA
TACCAACCACTCCCCTCAGTCTGCCAAAAATGGGGGCCTTATGGGGAAGGCTCTGACACTCCAC
CCCAGCTCAGGCCATGGGCAGCAGGGCTCCATTCTCTGGCCTGGCCCAGGCCTCTACATACTTA
CTCCAGCCATTTGGGGTGGTTGGGTCATGACAGCTACCATGAGAAGAAGTGTCCCGTTTTGTCC
AGTGGCCAATAGCAAGATATGAACCGGTCGGGACATGTATGGACTTGGTCTGATGCTGAATGGG
CCACTTGGGACCGGAAGTGACTTGCTCCAGACAAGAGGTGACCAGGCCCGGACAGAAATGGCCT
GGGAAGTAGCAGAAGCAGTGCAGCAGGAACTGGAAGTGCCTTCATCCAGGACAGGAAGTAGCAC
TTCTGAAACAGGAAGTGGTCTGGCTGGAACTCCAAGTGGCTTAGTCTGGGGGATCAGGGGGTGG
GAGGTGGATGGTTCTTACTCTGTGGAGAAGAAGGGCGGGAAGAACTTCCTTTCAGGAGGAAGCT
GGAACTTACTGACTGTAAGAGGATAGAGGTGGACCGAGAAGGACTTTTCCCAGTCTTCAGTGGC
ACTTCCCAAGATCTCCCTTCCCTTGTGCTCTGTGCTGATTTTAGGACAGCTAAGATGACTGCCA
TGTGCTGTGGCAGGCCCAATTTGTCTTGTTCTTTCCTTTCCATATCCCAGTATAATCTCTGTTA
ATCAACAGGACTACCCCAAGAACCCATGTGCTCTCCCGAGTAACCCAGATGGCTGTCTTGTTCA
TTCCATCCTACATTTCCGACTCCTTTCAGACTCAACACAGTTCCCTTCTTAGTGACCAAAATGG
TGGCCTACTGGCTGGTCTAGCTGACAGTGGTACTTAGCAAAGGCCACTGTTTCCATAGTGACCA
GCTGATACCTCTTCCTGCCCTCTAGTGTGCAATTGGGTGTTGCCTCAGTTTCCTCCCAGCTCAG
TTTTATTAGATCAAAGCTGTTGTTGGGCACCAGGTTGGCCACCTCAATCACCAGCCAAGATGGT
TGCTTTGTCCACCAGAGGTCAAGTTCACCTCTCTGGTGCTGTAGTTCCCAGCTCCTTCCTGATT
TTTCTAATCGCTCCTTCTGGGGAACAGGAAGTTGATATTGCCATGGTGGCGGGGTGTGCCGTCA
CCTCAGTAGTTTTACTGTAAAAGGGAAATTTGCAAAAACCAAAAAAAAATAAAAATAAAAAACT
TCAAAAGTTGACAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_003810113	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000010158.1
	ENSPPAP00050049052

RefSeq Acc Id:

XP_003810113 ⟸ XM_003810065

- UniProtKB:

A0A2R8ZZZ1 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGPPHSGPGGVRVGALLLLGVLGLVSGLSLEPVYWNSANKRFQAEGGYVLYPQIGDRLDLLCPR
ARPPGPHSSPNYEFYKLYLVGGAQGRRCEAPPAPNLLLTCDRPDLDLRFTIKFQEYSPNLWGHE
FRSHHDYYIIATSDGTREGLESLQGGVCLTRGMKVLLRVGQSPRGGAAPRKPVSEMPMERDRGA
AHSLEPGRENLPGDPTSNATSRGAEGPLPPPSMPAVAGAAGGLALLLLGVAGAGGAMCWRRRRA
KPSESRHPGPGSFGRGGSLGLGGGGGMGPREAEPGELGIALRGGGAADPPFCPHYEKVSGDYGH
PVYIVQDGPPQSPPNIYYKV

hide sequence

Ensembl Acc Id:

ENSPPAP00000010158 ⟸ ENSPPAT00000032805

Protein Domains

Ephrin RBD

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000028302	Ensembl, UniProtKB/TrEMBL
	ENSPPAG00050034664	ENTREZGENE
Ensembl Transcript	ENSPPAT00000032805.1	UniProtKB/TrEMBL
	ENSPPAT00050074370	ENTREZGENE
Gene3D-CATH	2.60.40.420	UniProtKB/TrEMBL
InterPro	Cupredoxin	UniProtKB/TrEMBL
	Ephrin	UniProtKB/TrEMBL
	Ephrin_CS	UniProtKB/TrEMBL
	Ephrin_RBD	UniProtKB/TrEMBL
KEGG Report	pps:100973594	UniProtKB/TrEMBL
NCBI Gene	EFNB3	ENTREZGENE
PANTHER	EPHRIN-B3	UniProtKB/TrEMBL
	PTHR11304	UniProtKB/TrEMBL
Pfam	Ephrin	UniProtKB/TrEMBL
PRINTS	EPHRIN	UniProtKB/TrEMBL
PROSITE	EPHRIN_RBD_1	UniProtKB/TrEMBL
	EPHRIN_RBD_2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF49503	UniProtKB/TrEMBL
UniProt	A0A2R8ZZZ1	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - MGI

RGD Manual Annotations

Imported Annotations - PID (archival)

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Imported Disease Annotations - MGI

RGD Manual Annotations

Imported Annotations - PID (archival)