QTL: GWAS1419196_H (schizophrenia QTL GWAS1419196 (human)) Homo sapiens
Symbol:
GWAS1419196_H
Name:
schizophrenia QTL GWAS1419196 (human)
RGD ID:
597323122
Trait:
schizophrenia
LOD Score:
Not Available
P Value:
2.0E-11
Variance:
Not Available
Position
Human Assembly Chr Position (strand) Source JBrowse GRCh38 15 40,274,558 - 40,274,559 RGD_MAPPER_PIPELINE GRCh38 GRCh37 15 40,566,759 - 40,566,760 RGD_MAPPER_PIPELINE GRCh37
Population Stats:
Not Available
JBrowse:
View Region in Genome Browser (JBrowse)
Model
12738319 BUB1B-PAK6 BUB1B-PAK6 readthrough 15 40217428 40277487 Human 1314703 PAK6 p21 (RAC1) activated kinase 6 15 40239063 40277487 Human
Peak: (rs56282503 )
Human Assembly Chr Position (strand) Source GRCh38 15 40,274,558 - 40,274,559 RGD_MAPPER_PIPELINE
2289410 BW327_H Body weight QTL 327 (human) 3.32 0.0001 Body fat amount 15 19980129 45980129 Human 1643273 BW330_H Body Weight QTL 330 (human) 1.05 0.014 Body weight body mass index 15 26866719 52866719 Human 597213963 GWAS1310037_H schizophrenia QTL GWAS1310037 (human) 2e-08 schizophrenia 15 40274558 40274559 Human 2289430 BMD7_H Bone mineral density QTL 7 (human) 3.32 0.0001 Bone mineral density 15 19980129 45980129 Human 1559411 SCL107_H Serum cholesterol level QTL 107 (human) 3.88 Lipid level triglyceride 15 26543552 52543552 Human 2299958 PRSTS330_H Prostate tumor susceptibility QTL 330 (human) 1.02 0.0151 Prostate tumor susceptibility 15 34790230 60790230 Human 597026205 GWAS1122279_H schizophrenia QTL GWAS1122279 (human) 0.0000003 schizophrenia 15 40274558 40274559 Human 597323122 GWAS1419196_H schizophrenia QTL GWAS1419196 (human) 2e-11 schizophrenia 15 40274558 40274559 Human 1643523 BW284_H Body Weight QTL 284 (human) 1.95 0.0013 Body weight 15 21792889 47792889 Human 1559354 LDLPS4_H Low density lipoprotein particle size QTL 4 (human) 2.2 0.019 LDL particle size 15 34790230 60790230 Human 2289420 BW314_H Body weight QTL 314 (human) 2.72 0.0003 Body weight lean mass 15 19980129 45980129 Human
Data has come from the GWAS Catalog
The highlighted row represents the current QTL
GWAS1419196_H GCST90128471 Schizophrenia
53,386 European ancestry cases, 77,258 European ancestry controls, 14,004 East Asian ancestry cases, 16,757 East Asian ancestry controls, 6,152 African American cases, 3,918 African American controls, 1,234 Latino cases, 3,090 Latino controls
T
0.762
2E-11
10.699
rs56282503 0.94242
PMID:35396580
GWAS1122279_H GCST008459 Schizophrenia
816 Indian ancestry cases, 900 Indian ancestry controls, 505 Indian ancestry cases and 871 Indian ancestry controls from 405 families, up to 36,989 European and unknown ancestry cases, up to 113,075 European and unknown ancestry controls
?
NR
3E-7
6.523
rs56282503 N/A
PMID:31268507
GWAS1310037_H GCST006803 Schizophrenia
40,675 European ancestry cases, 64,643 European ancestry controls
?
NR
2E-8
7.699
rs56282503 1.0638298
PMID:29483656
