BUB1B-PAK6 (BUB1B-PAK6 readthrough) - Rat Genome Database

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Gene: BUB1B-PAK6 (BUB1B-PAK6 readthrough) Homo sapiens
Analyze
No known orthologs.
Symbol: BUB1B-PAK6 (Ensembl: PAK6)
Name: BUB1B-PAK6 readthrough (Ensembl:p21 (RAC1) activated kinase 6)
RGD ID: 12738319
HGNC Page HGNC:52276
Description: Enables cadherin binding activity. Predicted to be involved in cellular response to starvation; intracellular signal transduction; and regulation of MAPK cascade. Located in cell junction; fibrillar center; and nucleoplasm.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: p21-activated kinase 6; PAK-5; PAK-6; PAK5; PAK6; serine/threonine-protein kinase PAK 6
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381540,217,428 - 40,277,487 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1540,218,500 - 40,264,890 (+)EnsemblGRCh38hg38GRCh38
GRCh38.p14 Ensembl1540,217,428 - 40,277,487 (+)EnsemblGRCh38hg38GRCh38
GRCh371540,509,629 - 40,569,688 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map15q15.1NCBI
CHM1_11540,629,582 - 40,689,654 (+)NCBICHM1_1
T2T-CHM13v2.01538,024,313 - 38,084,404 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


1 to 20 of 26 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
BUB1B-PAK6Humancolorectal cancer  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Colorectal cancerClinVarPMID:24728327 more ...
BUB1B-PAK6Humancolorectal cancer  IAGP (Homo sapiens) and (Homo sapiens)8554872ClinVar more ...ClinVarPMID:25741868 and PMID:28492532
BUB1B-PAK6Humangenetic disease  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:24728327 more ...
BUB1B-PAK6Humangenetic disease  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:25741868 and PMID:28492532
BUB1B-PAK6Humangenetic disease  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:15475955 more ...
BUB1B-PAK6Humangenetic disease  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVar 
BUB1B-PAK6Humangenetic disease  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVar 
BUB1B-PAK6Humangenetic disease  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:28492532
BUB1B-PAK6Humankeratoconus  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: KeratoconusClinVar 
BUB1B-PAK6Humanmicrocephaly  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: MicrocephalyClinVarPMID:25741868 and PMID:28492532
BUB1B-PAK6Humanmosaic variegated aneuploidy syndrome  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Mosaic variegated aneuploidy syndromeClinVarPMID:28492532
BUB1B-PAK6Humanmosaic variegated aneuploidy syndrome 1  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Mosaic variegated aneuploidy syndrome 1ClinVarPMID:27239782 and PMID:28492532
BUB1B-PAK6Humanmosaic variegated aneuploidy syndrome 1  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Mosaic variegated aneuploidy syndrome 1ClinVarPMID:25741868
BUB1B-PAK6Humanmosaic variegated aneuploidy syndrome 1  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Mosaic variegated aneuploidy syndrome 1ClinVarPMID:15475955 more ...
BUB1B-PAK6Humanmosaic variegated aneuploidy syndrome 1  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Mosaic variegated aneuploidy syndrome 1ClinVarPMID:17576681 more ...
BUB1B-PAK6Humanmosaic variegated aneuploidy syndrome 1  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Mosaic variegated aneuploidy syndrome 1ClinVarPMID:25741868 and PMID:28492532
BUB1B-PAK6Humanmosaic variegated aneuploidy syndrome 1  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Mosaic variegated aneuploidy syndrome 1ClinVarPMID:28492532
BUB1B-PAK6Humanmosaic variegated aneuploidy syndrome 1  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Mosaic variegated aneuploidy syndrome 1ClinVar 
BUB1B-PAK6Humanmosaic variegated aneuploidy syndrome 1  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Mosaic variegated aneuploidy syndrome 1ClinVarPMID:15475955 more ...
BUB1B-PAK6Humanmosaic variegated aneuploidy syndrome 1  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Mosaic variegated aneuploidy syndrome 1ClinVarPMID:15475955 more ...
1 to 20 of 26 rows


  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
BUB1B-PAK6Human17beta-estradiol multiple interactionsEXP 6480464[Estradiol co-treated with TGFB1 protein] results in decreased expression of BUB1B-PAK6 mRNACTDPMID:30165855
BUB1B-PAK6Humanaflatoxin M1 increases expressionEXP 6480464Aflatoxin M1 results in increased expression of BUB1B-PAK6 mRNACTDPMID:30928695
BUB1B-PAK6Humansodium arsenite decreases expressionEXP 6480464sodium arsenite results in decreased expression of BUB1B-PAK6 mRNACTDPMID:34032870


Biological Process
1 to 11 of 11 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
BUB1B-PAK6Humanapoptotic process involved_inTAS 150520179 PMID:20070256UniProtPMID:20070256
BUB1B-PAK6Humancellular response to starvation involved_inIBACGD:CAL0000192143 more ...150520179 GO_CentralGO_REF:0000033
BUB1B-PAK6Humancytoskeleton organization involved_inTAS 150520179 PMID:20070256UniProtPMID:20070256
BUB1B-PAK6Humanintracellular signal transduction involved_inIBACGD:CAL0000187689 more ...150520179 GO_CentralGO_REF:0000033
BUB1B-PAK6Humanlearning acts_upstream_of_or_withinIEAUniProtKB:Q3ULB5 and ensembl:ENSMUSP00000097153150520179 EnsemblGO_REF:0000107
BUB1B-PAK6Humanlocomotory behavior acts_upstream_of_or_withinIEAUniProtKB:Q3ULB5 and ensembl:ENSMUSP00000097153150520179 EnsemblGO_REF:0000107
BUB1B-PAK6Humanmemory acts_upstream_of_or_withinIEAUniProtKB:Q3ULB5 and ensembl:ENSMUSP00000097153150520179 EnsemblGO_REF:0000107
BUB1B-PAK6Humanneuron projection arborization acts_upstream_of_or_withinIEAUniProtKB:Q3ULB5 and ensembl:ENSMUSP00000097153150520179 EnsemblGO_REF:0000107
BUB1B-PAK6Humanneuron projection extension acts_upstream_of_or_withinIEAUniProtKB:Q3ULB5 and ensembl:ENSMUSP00000097153150520179 EnsemblGO_REF:0000107
BUB1B-PAK6Humanregulation of DNA-templated transcription involved_inTAS 150520179 PMID:20070256UniProtPMID:20070256
BUB1B-PAK6Humanregulation of MAPK cascade involved_inIBAFB:FBgn0025743 more ...150520179 GO_CentralGO_REF:0000033
1 to 11 of 11 rows

Cellular Component
1 to 10 of 10 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
BUB1B-PAK6Humancell junction located_inIDA 150520179 HPAGO_REF:0000052
BUB1B-PAK6Humancytoplasm located_inIEAUniProtKB-KW:KW-0963150520179 UniProtGO_REF:0000043
BUB1B-PAK6Humancytoplasm is_active_inIBAFB:FBgn0010909 more ...150520179 GO_CentralGO_REF:0000033
BUB1B-PAK6Humancytoplasm located_inIEAUniProtKB-SubCell:SL-0086150520179 UniProtGO_REF:0000044
BUB1B-PAK6Humancytosol located_inTAS 150520179 ReactomeReactome:R-HSA-9013145 more ...
BUB1B-PAK6Humanfibrillar center located_inIDA 150520179 HPAGO_REF:0000052
BUB1B-PAK6Humannucleoplasm located_inIDA 150520179 HPAGO_REF:0000052
BUB1B-PAK6Humannucleus located_inIEAUniProtKB-KW:KW-0539150520179 UniProtGO_REF:0000043
BUB1B-PAK6Humannucleus located_inIEAUniProtKB-SubCell:SL-0191150520179 UniProtGO_REF:0000044
BUB1B-PAK6Humanpostsynaptic density is_active_inIEAUniProtKB:Q3ULB5 and ensembl:ENSMUSP00000097153150520179 EnsemblGO_REF:0000107
1 to 10 of 10 rows

Molecular Function
1 to 18 of 18 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
BUB1B-PAK6HumanATP binding enablesIEAInterPro:IPR000719 and InterPro:IPR017441150520179 InterProGO_REF:0000002
BUB1B-PAK6HumanATP binding enablesIEAUniProtKB-KW:KW-0067150520179 UniProtGO_REF:0000043
BUB1B-PAK6Humancadherin binding enablesHDA 150520179 PMID:25468996BHF-UCLPMID:25468996
BUB1B-PAK6Humankinase activity enablesIEAUniProtKB-KW:KW-0418150520179 UniProtGO_REF:0000043
BUB1B-PAK6Humannucleotide binding enablesIEAUniProtKB-KW:KW-0547150520179 UniProtGO_REF:0000043
BUB1B-PAK6Humanprotein binding enablesIPIUniProtKB:P62258150520179 PMID:28514442 more ...IntActPMID:28514442 more ...
BUB1B-PAK6Humanprotein binding enablesIPIUniProtKB:P60953 and UniProtKB:P62258150520179 PMID:32707033IntActPMID:32707033
BUB1B-PAK6Humanprotein binding enablesIPIUniProtKB:P60953150520179 PMID:20936779 and PMID:31980649IntActPMID:20936779 and PMID:31980649
BUB1B-PAK6Humanprotein binding enablesIPIUniProtKB:Q5S007150520179 PMID:24510904 and PMID:24947832IntActPMID:24510904 and PMID:24947832
BUB1B-PAK6Humanprotein binding enablesIPIUniProtKB:O75031 and UniProtKB:Q96L33150520179 PMID:32296183IntActPMID:32296183
BUB1B-PAK6Humanprotein binding enablesIPIUniProtKB:Q9H4E5150520179 PMID:25416956 and PMID:31515488IntActPMID:25416956 and PMID:31515488
BUB1B-PAK6Humanprotein kinase activity enablesIEAInterPro:IPR000719150520179 InterProGO_REF:0000002
BUB1B-PAK6Humanprotein serine kinase activity enablesIEARHEA:17989150520179 RHEAGO_REF:0000116
BUB1B-PAK6Humanprotein serine/threonine kinase activity enablesIEAUniProtKB-KW:KW-0723150520179 UniProtGO_REF:0000043
BUB1B-PAK6Humanprotein serine/threonine kinase activity enablesIEAEC:2.7.11.1150520179 UniProtGO_REF:0000003
BUB1B-PAK6Humanprotein serine/threonine kinase activity enablesIBACGD:CAL0000192143 more ...150520179 GO_CentralGO_REF:0000033
BUB1B-PAK6Humanprotein serine/threonine kinase activity enablesIEAInterPro:IPR033923150520179 InterProGO_REF:0000002
BUB1B-PAK6Humantransferase activity enablesIEAUniProtKB-KW:KW-0808150520179 UniProtGO_REF:0000043
1 to 18 of 18 rows

1 to 16 of 16 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
BUB1B-PAK6HumanColon cancer  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Colorectal cancerClinVarPMID:25741868 and PMID:28492532
BUB1B-PAK6HumanColon cancer  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Colorectal cancerClinVarPMID:25741868
BUB1B-PAK6HumanColon cancer  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Colorectal cancerClinVarPMID:15475955 more ...
BUB1B-PAK6HumanColon cancer  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Colon carcinomaClinVarPMID:25741868
BUB1B-PAK6HumanColon cancer  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Colorectal cancerClinVarPMID:25741868 and PMID:28492532
BUB1B-PAK6HumanColon cancer  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Colorectal cancerClinVarPMID:25741868
BUB1B-PAK6HumanColon cancer  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Colorectal cancerClinVarPMID:25741868 and PMID:28492532
BUB1B-PAK6HumanColon cancer  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Colorectal cancerClinVarPMID:25741868 and PMID:28492532
BUB1B-PAK6HumanColon cancer  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Colorectal cancerClinVarPMID:15475955 more ...
BUB1B-PAK6HumanColon cancer  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Colorectal cancerClinVarPMID:25741868 and PMID:28492532
BUB1B-PAK6HumanColon cancer  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Colorectal cancerClinVarPMID:24728327 more ...
BUB1B-PAK6HumanColon cancer  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Colorectal cancerClinVarPMID:25741868 and PMID:28492532
BUB1B-PAK6HumanKeratoconus  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: KeratoconusClinVar 
BUB1B-PAK6HumanMicrocephaly  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Small skullClinVarPMID:25741868 and PMID:28492532
BUB1B-PAK6HumanOvarian neoplasm  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Neoplasm of the ovaryClinVar 
BUB1B-PAK6HumanOvarian neoplasm  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Ovarian cancerClinVarPMID:25741868
1 to 16 of 16 rows
PMID:11278661   PMID:11773441   PMID:14573606   PMID:15550393   PMID:18465753   PMID:20070256   PMID:20817787   PMID:22339630   PMID:23132866   PMID:23251661  



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Variants in BUB1B-PAK6
343 total Variants

1 to 10 of 342 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
NM_001211.6(BUB1B):c.2851-1G>C single nucleotide variant Mosaic variegated aneuploidy syndrome 1 [RCV003507310]|not provided [RCV000722570] Chr15:40218455 [GRCh38]
Chr15:40510656 [GRCh37]
Chr15:15q15.1
likely pathogenic|uncertain significance
GRCh38/hg38 15q14-15.1(chr15:36531993-40787538)x3 copy number gain See cases [RCV000052341] Chr15:36531993..40787538 [GRCh38]
Chr15:36824194..41079736 [GRCh37]
Chr15:34611486..38867028 [NCBI36]
Chr15:15q14-15.1
pathogenic
NM_001211.6(BUB1B):c.2763G>C (p.Gln921His) single nucleotide variant Inborn genetic diseases [RCV004018580]|Mosaic variegated aneuploidy syndrome 1 [RCV000007156]|Mosaic variegated aneuploidy syndrome 1 [RCV005007832]|Premature chromatid separation trait [RCV000007157]|not provided [RCV001552489] Chr15:40217580 [GRCh38]
Chr15:40509781 [GRCh37]
Chr15:15q15.1
pathogenic|affects|conflicting interpretations of pathogenicity|uncertain significance
NM_001211.6(BUB1B):c.3035T>C (p.Leu1012Pro) single nucleotide variant Mosaic variegated aneuploidy syndrome 1 [RCV000007162]|Mosaic variegated aneuploidy syndrome 1 [RCV002482838]|Premature chromatid separation trait [RCV000007163]|not specified [RCV002509147] Chr15:40220641 [GRCh38]
Chr15:40512842 [GRCh37]
Chr15:15q15.1
pathogenic|affects|uncertain significance
NM_001211.6(BUB1B):c.2856C>T (p.Asp952=) single nucleotide variant Colorectal cancer [RCV003316161]|Mosaic variegated aneuploidy syndrome 1 [RCV000210533]|not provided [RCV001640328]|not specified [RCV000246993] Chr15:40218461 [GRCh38]
Chr15:40510662 [GRCh37]
Chr15:15q15.1
benign
NM_001211.6(BUB1B):c.2729T>A (p.Val910Glu) single nucleotide variant Mosaic variegated aneuploidy syndrome 1 [RCV000230606] Chr15:40217546 [GRCh38]
Chr15:40509747 [GRCh37]
Chr15:15q15.1
uncertain significance
NM_001211.6(BUB1B):c.3011A>G (p.Asn1004Ser) single nucleotide variant Colorectal cancer [RCV003315740]|Inborn genetic diseases [RCV002515824]|Mosaic variegated aneuploidy syndrome 1 [RCV000457975]|not provided [RCV001560420]|not specified [RCV000120423] Chr15:40220617 [GRCh38]
Chr15:40512818 [GRCh37]
Chr15:15q15.1
benign|likely benign|not provided
NM_001211.6(BUB1B):c.2784C>T (p.Ser928=) single nucleotide variant Inborn genetic diseases [RCV002438375]|Mosaic variegated aneuploidy syndrome 1 [RCV000555231] Chr15:40217601 [GRCh38]
Chr15:40509802 [GRCh37]
Chr15:15q15.1
likely benign
NM_001211.6(BUB1B):c.3099A>G (p.Lys1033=) single nucleotide variant Colorectal cancer [RCV003316389]|Mosaic variegated aneuploidy syndrome 1 [RCV000471759]|not provided [RCV001689822]|not specified [RCV000251949] Chr15:40220705 [GRCh38]
Chr15:40512906 [GRCh37]
Chr15:15q15.1
benign
GRCh38/hg38 15q13.3-15.1(chr15:32635803-40233825)x1 copy number loss See cases [RCV000051617] Chr15:32635803..40233825 [GRCh38]
Chr15:32928004..40526026 [GRCh37]
Chr15:30715296..38313318 [NCBI36]
Chr15:15q13.3-15.1
pathogenic
1 to 10 of 342 rows

Predicted Target Of
Summary Value
Count of predictions:2044
Count of miRNA genes:889
Interacting mature miRNAs:1039
Transcripts:ENST00000558658, ENST00000558965, ENST00000559435, ENST00000559936
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 17 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2289410BW327_HBody weight QTL 327 (human)3.320.0001Body fat amount151998012945980129Human
1559411SCL107_HSerum cholesterol level QTL 107 (human)3.88Lipid leveltriglyceride152654355252543552Human
597026205GWAS1122279_Hschizophrenia QTL GWAS1122279 (human)0.0000003schizophrenia154027455840274559Human
597323122GWAS1419196_Hschizophrenia QTL GWAS1419196 (human)2e-11schizophrenia154027455840274559Human
1559354LDLPS4_HLow density lipoprotein particle size QTL 4 (human)2.20.019LDL particle size153479023060790230Human
2289420BW314_HBody weight QTL 314 (human)2.720.0003Body weightlean mass151998012945980129Human
597370740GWAS1466814_HIGFBP-3 measurement QTL GWAS1466814 (human)0.000001IGFBP-3 measurement154024066740240668Human
1643273BW330_HBody Weight QTL 330 (human)1.050.014Body weightbody mass index152686671952866719Human
597094311GWAS1190385_Hschizophrenia QTL GWAS1190385 (human)9e-08schizophrenia154027503640275037Human
597213963GWAS1310037_Hschizophrenia QTL GWAS1310037 (human)2e-08schizophrenia154027455840274559Human

1 to 10 of 17 rows



adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
1200 2485 2780 2227 4987 1636 2329 8 521 1841 366 2290 7112 6372 39 3723 831 1847 1694 180



Ensembl Acc Id: ENST00000260404   ⟹   ENSP00000260404
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1540,239,870 - 40,277,487 (+)Ensembl
Ensembl Acc Id: ENST00000441369   ⟹   ENSP00000406873
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1540,217,449 - 40,276,396 (+)Ensembl
Ensembl Acc Id: ENST00000453867   ⟹   ENSP00000401153
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1540,217,428 - 40,276,181 (+)Ensembl
Ensembl Acc Id: ENST00000455577   ⟹   ENSP00000409465
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1540,239,091 - 40,277,486 (+)Ensembl
Ensembl Acc Id: ENST00000542403   ⟹   ENSP00000439597
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1540,253,184 - 40,277,487 (+)Ensembl
Ensembl Acc Id: ENST00000557808
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1540,273,930 - 40,276,384 (+)Ensembl
Ensembl Acc Id: ENST00000557926
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1540,266,612 - 40,272,354 (+)Ensembl
Ensembl Acc Id: ENST00000558055   ⟹   ENSP00000453407
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1540,239,054 - 40,266,003 (+)Ensembl
Ensembl Acc Id: ENST00000558106   ⟹   ENSP00000453721
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1540,252,190 - 40,266,006 (+)Ensembl
Ensembl Acc Id: ENST00000558183   ⟹   ENSP00000452647
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1540,240,567 - 40,264,989 (+)Ensembl
Ensembl Acc Id: ENST00000558658   ⟹   ENSP00000456785
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1540,217,587 - 40,276,387 (+)Ensembl
Ensembl Acc Id: ENST00000558878   ⟹   ENSP00000452737
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1540,240,522 - 40,264,940 (+)Ensembl
Ensembl Acc Id: ENST00000559139   ⟹   ENSP00000452686
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1540,252,888 - 40,265,964 (+)Ensembl
Ensembl Acc Id: ENST00000559435   ⟹   ENSP00000457109
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1540,218,500 - 40,264,890 (+)Ensembl
Ensembl Acc Id: ENST00000559617   ⟹   ENSP00000452708
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1540,252,548 - 40,265,974 (+)Ensembl
Ensembl Acc Id: ENST00000559901
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1540,266,014 - 40,266,982 (+)Ensembl
Ensembl Acc Id: ENST00000560346   ⟹   ENSP00000453858
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1540,239,063 - 40,277,487 (+)Ensembl
Ensembl Acc Id: ENST00000560669   ⟹   ENSP00000453021
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1540,253,003 - 40,266,491 (+)Ensembl
Ensembl Acc Id: ENST00000560684   ⟹   ENSP00000453057
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1540,252,551 - 40,264,980 (+)Ensembl
Ensembl Acc Id: ENST00000560806   ⟹   ENSP00000453005
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1540,240,645 - 40,264,827 (+)Ensembl
Ensembl Acc Id: ENST00000561230   ⟹   ENSP00000453520
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1540,238,759 - 40,265,951 (+)Ensembl
RefSeq Acc Id: NM_001128628   ⟹   NP_001122100
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381540,217,428 - 40,277,487 (+)NCBI
CHM1_11540,629,582 - 40,689,654 (+)NCBI
T2T-CHM13v2.01538,024,313 - 38,084,404 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001128629   ⟹   NP_001122101
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381540,217,428 - 40,277,487 (+)NCBI
CHM1_11540,629,582 - 40,689,654 (+)NCBI
T2T-CHM13v2.01538,024,313 - 38,084,404 (+)NCBI
Sequence:
1 to 14 of 14 rows
Protein RefSeqs NP_001122100 (Get FASTA)   NCBI Sequence Viewer  
  NP_001122101 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein BAF82916 (Get FASTA)   NCBI Sequence Viewer  
  BAF98704 (Get FASTA)   NCBI Sequence Viewer  
  BAF98708 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000260404.4
  ENSP00000401153
  ENSP00000401153.3
  ENSP00000406873
  ENSP00000406873.1
  ENSP00000409465.2
  ENSP00000439597.2
  ENSP00000453858.1
  ENSP00000456785.2
1 to 14 of 14 rows
1 to 5 of 20 rows
1 to 5 of 20 rows
RefSeq Acc Id: NP_001122100   ⟸   NM_001128628
- UniProtKB: B3KYB0 (UniProtKB/Swiss-Prot),   A8K2G2 (UniProtKB/Swiss-Prot),   G5E9R2 (UniProtKB/Swiss-Prot),   Q9NQU5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001122101   ⟸   NM_001128629
- UniProtKB: B3KYB0 (UniProtKB/Swiss-Prot),   A8K2G2 (UniProtKB/Swiss-Prot),   G5E9R2 (UniProtKB/Swiss-Prot),   Q9NQU5 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSP00000439597   ⟸   ENST00000542403
Ensembl Acc Id: ENSP00000453721   ⟸   ENST00000558106
Ensembl Acc Id: ENSP00000452647   ⟸   ENST00000558183
CRIB   Protein kinase

Name Modeler Protein Id AA Range Protein Structure
AF-Q9NQU5-F1-model_v2 AlphaFold Q9NQU5 1-681 view protein structure

RGD ID:7229081
Promoter ID:EPDNEW_H20287
Type:initiation region
Name:PAK6_7
Description:p21 activated kinase 6
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H20279  EPDNEW_H20280  EPDNEW_H20281  EPDNEW_H20282  EPDNEW_H20283  EPDNEW_H20285  EPDNEW_H20284  EPDNEW_H20286  EPDNEW_H20288  EPDNEW_H20289  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381540,253,281 - 40,253,341EPDNEW


1 to 40 of 47 rows
Database
Acc Id
Source(s)
COSMIC BUB1B-PAK6 COSMIC
Ensembl Genes ENSG00000137843 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
  ENSG00000259288 Ensembl
Ensembl Transcript ENST00000260404.8 UniProtKB/Swiss-Prot
  ENST00000441369 ENTREZGENE
  ENST00000441369.6 UniProtKB/Swiss-Prot
  ENST00000453867 ENTREZGENE
  ENST00000453867.7 UniProtKB/Swiss-Prot
  ENST00000455577.6 UniProtKB/Swiss-Prot
  ENST00000542403.3 UniProtKB/Swiss-Prot
  ENST00000558658.6 UniProtKB/Swiss-Prot
  ENST00000560346.6 UniProtKB/Swiss-Prot
Gene3D-CATH 3.90.810.10 UniProtKB/Swiss-Prot
  Phosphorylase Kinase, domain 1 UniProtKB/Swiss-Prot
  Transferase(Phosphotransferase) domain 1 UniProtKB/Swiss-Prot
GTEx ENSG00000137843 GTEx
  ENSG00000259288 GTEx
HGNC ID HGNC:52276 ENTREZGENE
Human Proteome Map BUB1B-PAK6 Human Proteome Map
InterPro CRIB_dom UniProtKB/Swiss-Prot
  CRIB_dom_sf UniProtKB/Swiss-Prot
  Kinase-like_dom_sf UniProtKB/Swiss-Prot
  PAK3-like UniProtKB/Swiss-Prot
  PAK6 UniProtKB/Swiss-Prot
  PAK_BD UniProtKB/Swiss-Prot
  Prot_kinase_dom UniProtKB/Swiss-Prot
  Protein_kinase_ATP_BS UniProtKB/Swiss-Prot
KEGG Report hsa:106821730 UniProtKB/Swiss-Prot
  hsa:56924 UniProtKB/Swiss-Prot
NCBI Gene BUB1B-PAK6 ENTREZGENE
PANTHER NON-SPECIFIC SERINE_THREONINE PROTEIN KINASE UniProtKB/Swiss-Prot
  SERINE/THREONINE-PROTEIN KINASE SAMKA-RELATED-RELATED UniProtKB/Swiss-Prot
Pfam PBD UniProtKB/Swiss-Prot
  Pkinase UniProtKB/Swiss-Prot
PROSITE CRIB UniProtKB/Swiss-Prot
  PROTEIN_KINASE_ATP UniProtKB/Swiss-Prot
  PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot
SMART PBD UniProtKB/Swiss-Prot
Superfamily-SCOP SSF56112 UniProtKB/Swiss-Prot
UniProt A8K2G2 ENTREZGENE
1 to 40 of 47 rows